LOC120569789


Basic Information

Item Value
gene id LOC120569789
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6801402 ~ 6801516 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640974.1
CGCTCttgtttctcttcagatcgtatAAATCTTTCGCCTTTTACTAAAGATTTCCGTGGAGAGGAACATTAAGAGTTTCAACTAATTTTTGTTATGCCCTGTTTCATGCGGGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640974.1 True 115 snRNA 0.39 1 6801402 6801516

Neighbor

gene id symbol gene type direction distance location
LOC120569812 NA coding upstream 1714 6799575 ~ 6799688 (+)
LOC120569778 NA coding upstream 2798 6798490 ~ 6798604 (+)
LOC120569765 NA coding upstream 3822 6797466 ~ 6797580 (+)
LOC120564849 ugp2,LOC100710204,LOC101487688 coding upstream 37605 6727928 ~ 6763797 (+)
LOC120564833 mdha,mdh1,LOC107382285,LOC106536176 coding upstream 78444 6695584 ~ 6722958 (+)
LOC120569727 NA coding downstream 489 6802005 ~ 6802119 (+)
trnae-uuc_10 NA coding downstream 365080 7166596 ~ 7166667 (+)
trnae-uuc_11 NA coding downstream 365586 7167102 ~ 7167173 (+)
trnae-uuc_12 NA coding downstream 366104 7167620 ~ 7167691 (+)
trnae-uuc_13 NA coding downstream 366616 7168132 ~ 7168203 (+)
G2268 NA non-coding upstream 18490 6774822 ~ 6782912 (+)
G2263 NA non-coding upstream 26152 6771355 ~ 6775250 (+)
G2267 NA non-coding upstream 45663 6754529 ~ 6755739 (+)
G2264 NA non-coding upstream 68729 6732115 ~ 6732673 (+)
G2260 NA non-coding upstream 76718 6724440 ~ 6724684 (+)
G2272 NA non-coding downstream 6288 6807804 ~ 6808666 (+)
G2274 NA non-coding downstream 9234 6810750 ~ 6811453 (+)
G2276 NA non-coding downstream 13492 6815008 ~ 6815992 (+)
G2278 NA non-coding downstream 22848 6824364 ~ 6824564 (+)
G2279 NA non-coding downstream 26876 6828392 ~ 6828667 (+)
G1973 NA other upstream 267032 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 364185 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 398762 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 885028 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 1329993 5387393 ~ 5471409 (+)
G2530 NA other downstream 897749 7699265 ~ 7699540 (+)
G2557 NA other downstream 1140031 7941547 ~ 7948253 (+)
G2590 NA other downstream 1288297 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 1600199 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 1815867 8617383 ~ 8643702 (+)

Expression


Co-expression Network