trnae-uuc_2


Basic Information

Item Value
gene id trnae-uuc_2
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7032094 ~ 7032165 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_4
TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTTCACCCAGGTGTCCTGGGTTCAACTCCCGGTATGGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_4 True 72 tRNA 0.45 1 7032094 7032165

Neighbor

gene id symbol gene type direction distance location
LOC120569746 NA coding downstream 236486 6795494 ~ 6795608 (-)
LOC120569800 NA coding downstream 237378 6794604 ~ 6794716 (-)
LOC120569742 NA coding downstream 237888 6794092 ~ 6794206 (-)
LOC120569795 NA coding downstream 238775 6793207 ~ 6793319 (-)
LOC120569752 NA coding downstream 239289 6792691 ~ 6792805 (-)
zgc:66455 NA coding upstream 108569 7140734 ~ 7155323 (-)
b3gnt2a NA coding upstream 126705 7158870 ~ 7223862 (-)
LOC120565981 NA coding upstream 209655 7241820 ~ 7246413 (-)
LOC120562943 NA coding upstream 217416 7249581 ~ 7255345 (-)
LOC120565143 NA coding upstream 260382 7292547 ~ 7307876 (-)
G2342 NA non-coding downstream 54457 6948269 ~ 6977637 (-)
G2327 NA non-coding downstream 144695 6886366 ~ 6887399 (-)
G2326 NA non-coding downstream 146257 6885076 ~ 6885837 (-)
G2322 NA non-coding downstream 172378 6857134 ~ 6859716 (-)
G2320 NA non-coding downstream 185345 6846521 ~ 6846749 (-)
trnae-uuc_3 NA non-coding upstream 3004 7035169 ~ 7035240 (-)
trnae-uuc_4 NA non-coding upstream 3714 7035879 ~ 7035950 (-)
trnae-uuc_5 NA non-coding upstream 4720 7036885 ~ 7036956 (-)
trnae-uuc_6 NA non-coding upstream 6347 7038512 ~ 7038583 (-)
trnae-uuc_7 NA non-coding upstream 7317 7039482 ~ 7039553 (-)
trnae-uuc_1 NA other downstream 8906 7023117 ~ 7023188 (-)
trnae-uuc NA other downstream 10449 7021574 ~ 7021645 (-)
LOC120571633 otx1,LOC102233826 other downstream 14435 6999171 ~ 7017659 (-)
LOC120565104 peli1,LOC103372217,LOC100709940,LOC102294912,LOC101486541,LOC108247092,LOC107382286 other downstream 93107 6889288 ~ 6938987 (-)
vps54 vps54 other downstream 155857 6808752 ~ 6876237 (-)
commd1 commd1,LOC102781613,LOC103150757 other upstream 193175 7225340 ~ 7240150 (-)
LOC120569296 NA other upstream 299791 7331956 ~ 7372558 (-)
akt3b akt3,LOC103470003,LOC103150748,LOC100692017,LOC108246299,LOC101174244 other upstream 616677 7648842 ~ 7690587 (-)
G2752 NA other upstream 707659 7739824 ~ 7763948 (-)
capn9 capn9 other upstream 903775 7935940 ~ 7957621 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnae-uuc-51 NA coding NC_048581.1 CM023235.2 83516773 ~ 83516844 (+)