XLOC_004618 (dre-mir-107a)


Basic Information

Item Value
gene id XLOC_004618
gene name dre-mir-107a
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 16960693 ~ 16960781 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009153
TCTGTGTGCTCTGAGCTTCTTTACAGTGTTGTCTTGTGGCATGGAGATCAAGCAGCATTGTACAGGGCTATCACAGCACACTGAACAGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083423

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009153 True 89 miRNA 0.48 1 16960693 16960781

Neighbor

gene id symbol gene type direction distance location
XLOC_004616 zgc:174153 coding upstream 8842 16949391 ~ 16951851 (+)
XLOC_004615 NA coding upstream 85990 16742395 ~ 16874703 (+)
XLOC_004614 NA coding upstream 375639 16583373 ~ 16585054 (+)
XLOC_004613 NA coding upstream 390649 16567854 ~ 16570044 (+)
XLOC_004612 NA coding upstream 468887 16490198 ~ 16491806 (+)
XLOC_004619 slc16a12b coding downstream 6934 16967715 ~ 16986968 (+)
XLOC_004620 ch25h coding downstream 81973 17042754 ~ 17043874 (+)
XLOC_004621 acta2 coding downstream 139240 17100021 ~ 17116481 (+)
XLOC_004622 ankrd22 coding downstream 193874 17154655 ~ 17158635 (+)
XLOC_004623 rnls coding downstream 240741 17201522 ~ 17323341 (+)
XLOC_004611 NA non-coding upstream 473126 16486965 ~ 16487567 (+)
XLOC_004624 AL731788.1 non-coding downstream 384769 17345550 ~ 17345667 (+)
XLOC_004625 NA non-coding downstream 463650 17424431 ~ 17427380 (+)
XLOC_004634 BX005075.1 non-coding downstream 1164877 18125658 ~ 18125774 (+)
XLOC_004635 NA non-coding downstream 1249090 18209871 ~ 18228004 (+)
XLOC_004644 AL772266.2 non-coding downstream 1638069 18598850 ~ 18598964 (+)

Expression


Co-expression Network