trnat-ugu


Basic Information

Item Value
gene id trnat-ugu
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 46206932 ~ 46207004 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_71
GGCTCCATAGCTCAGGGGTTAGAGCACTGGTCTTGTAAACCAGGGGTCGCGAGTTCAAATCTCGCTGGGGcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_71 True 73 tRNA 0.42 1 46206932 46207004

Neighbor

gene id symbol gene type direction distance location
gstt1b NA coding upstream 105605 46080099 ~ 46101327 (+)
ddt ddt,LOC103368817,LOC104931754,LOC108247357 coding upstream 127913 46068792 ~ 46079019 (+)
chchd10 chchd10,LOC100703844,LOC102306302,LOC102209825,LOC101482224 coding upstream 141363 46057091 ~ 46065569 (+)
p2rx3b p2rx3,LOC103356184,LOC101065458 coding upstream 297142 45869403 ~ 45909790 (+)
tmx2b LOC100701608,LOC103356189,LOC102313962,LOC102233014 coding upstream 515581 45681248 ~ 45691351 (+)
LOC120557716 LOC104930044,LOC103368287,LOC102204811,LOC102301891 coding downstream 111372 46318376 ~ 46337333 (+)
LOC120562127 NA coding downstream 139966 46346970 ~ 46373840 (+)
si:ch73-6k14.2 NA coding downstream 185842 46392846 ~ 46401365 (+)
LOC120543662 NA coding downstream 1993866 48200870 ~ 48202754 (+)
neurl1aa LOC108246381,LOC103355274,LOC104926624,LOC102796982,LOC101477033,LOC102303708,LOC100693641 coding downstream 2007300 48214304 ~ 48320857 (+)
G12485 NA non-coding upstream 41184 46165530 ~ 46165748 (+)
G12484 NA non-coding upstream 42537 46164192 ~ 46164395 (+)
G12445 NA non-coding upstream 154701 46051857 ~ 46052231 (+)
G12435 NA non-coding upstream 187902 46016372 ~ 46019030 (+)
G12410 NA non-coding upstream 242686 45960315 ~ 45964246 (+)
G12522 NA non-coding downstream 61808 46268812 ~ 46269026 (+)
LOC120557712 NA non-coding downstream 76044 46283048 ~ 46285479 (+)
G12537 NA non-coding downstream 83737 46290741 ~ 46291068 (+)
G12559 NA non-coding downstream 265674 46472678 ~ 46472913 (+)
G12566 NA non-coding downstream 274177 46481181 ~ 46481459 (+)
G12491 NA other upstream 37243 46166405 ~ 46169689 (+)
trnae-cuc NA other upstream 42379 46164482 ~ 46164553 (+)
G12311 LOC102783284,LOC102207724,LOC106675709,LOC102300942,LOC102207434,LOC108250287 other upstream 560959 45638080 ~ 45645973 (+)
G11976 NA other upstream 2839085 43361536 ~ 43367847 (+)
G11897 NA other upstream 3119011 43086020 ~ 43087921 (+)
trnak-uuu_1 NA other downstream 649 46207653 ~ 46207725 (+)
G12553 NA other downstream 209424 46416428 ~ 46417773 (+)
LOC120564084 LOC100694180 other downstream 639013 46846017 ~ 47125487 (+)
G12872 NA other downstream 2221796 48428800 ~ 48488219 (+)
G12873 NA other downstream 2278244 48485248 ~ 48486493 (+)

Expression


Co-expression Network