G75077 (LOC104960445)


Basic Information

Item Value
gene id G75077
gene name LOC104960445
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 23016807 ~ 23018595 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU100419
GCAGAAAAATGCTATGTGATTGTTACTAACTATTATAATTCTGTTAGTATTgatgatgcattaatgtgtcaTCATTTTACTGTCCACATTTTACCAACCTAATAACTGTTGGGTAATTTCATTTATAACAATGAATCaaatctgtaaagtaaccatcaactacagctgtcagataaatgtagtggggtAAAAAGTAGAATTTTTTCCTCTGAAATTTAATGGAGAGGTattaagtagcataaaatgtaaagtatgtacaagtacctcaaaactgTACGGTAtttgattaaaggtcccatggcatgaaaatgtcactttatgatgATTTTTAAcataatatgcgttcccccagcctgcctatggtcccccagtggccagaaatggcgataggtgtaaaccgagccctgggtatcctgctctgcctttgagaaaatgaaagctcagatgggccaatctggaatcttctccttatgaggtcataaggagcaaggttacctcccctttctctgctttgccctcccagagaatttggcccacccatgagagagagacatcatggctttcaaacaagcaaagtggcagttggtcaagcccccccctctcctcctcaatagctacagacacagaaatggcacatactaaggaaagcttattgtgggactggctctagtggctgaatttagggaaagagacttcagatacagtattaggggagcagtaaggcctatataaaagcatccaaagagcaccatgtcatgggacctttaaatttacCTAGTTACTTTCCAACTTTCCATCAATGATGACAAACAGCAAAGACCACAATAAATATAGCTTACTATTCTTGGGATATTATATCAAAAACTAacaatgtatatgtatatgtatatgtATATGTACAAAAGTAAACGCCCATTGACTGTAATATCTTACATTTACACAACATTCATTGTAAACAGTGATAAATTCCACATCAATAGACGATGGCTTATGTGCATTGGCTTGCTCAGCATTTATCTCTGGTTAGCATGAAGAGCATAGCTAGCTGGAGCTTGTGACTTACTTTAGAGATGATGGCTATACGTTTATATCTGTAATATCAGTTGTTACAGAGCACTGTTGCACAGAGAATTTAGCTATGTGAACTAACTTTGGACATTAGATGCAACCGGTGCATGTCACttaatataatacatattaaAAAAGCTTGCTGCAttgaaacacaaagacacaaatataagaaaacaaacattcagTGCCAGGAAATGtcttgcattttgtgtgcatCATCATCAAAAGAAAAGAGATCCTTTTTAGTAACTAAGGCAACAACCACCAGTAGAGTCTGAATAGCAAGGGGCTCCAAACAGAAGCAGAATATGATAGTGATGGAGGAGCAGCATTGGACGAAGGCTGTGTAATGTCTATCATCTTGTTAGACTGTCCTTCCTCCTCACTGCTGATAGCTCGGGTGGTCAAGAGTCTGGCCCTCGATGGCCCATAGTCCTTCCTCTCAACAGAGGGGGGCAAAGTGGGCAGGGTGCAGGTTTCAATCGAAGGTAAGCACCCGACATCAAGCCATCGAGTGAAAAGTTCTGACGTTAGCTTGAGGAGTTCTTCAGGAGAGGAAGATAATGTGGAGAATTGGGTCAGGTCCGTCTCCTCCTGGAACCTCTGAGACGAGGAAACAGGGAACAGAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC104960445 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100419 True 1700 lncRNA 0.41 2 23016807 23018595

Neighbor

gene id symbol gene type direction distance location
cdc42ep5 cdc42ep5 coding upstream 9487 23004372 ~ 23007320 (+)
rbfox1l LOC104929735,LOC100696733,LOC102314559 coding upstream 34028 22968438 ~ 22982779 (+)
tfpt tfpt,LOC102781997 coding upstream 117938 22893099 ~ 22898869 (+)
zgc:158689 LOC104960461,LOC101078804 coding upstream 128929 22878031 ~ 22887878 (+)
cyth2 cyth2,LOC103136639,LOC106520542,LOC107088802 coding upstream 151964 22852358 ~ 22864843 (+)
leng9 NA coding downstream 10123 23028718 ~ 23036069 (+)
ttyh1 ttyh1,LOC102785918 coding downstream 18304 23036899 ~ 23058964 (+)
ube2s ube2s coding downstream 45207 23063802 ~ 23070370 (+)
si:dkeyp-69b9.6 znf628,LOC100697888,LOC102784474,LOC103360149 coding downstream 68580 23087175 ~ 23096445 (+)
dbpb dbp,LOC104960436,LOC103360148,LOC106963973 coding downstream 80694 23099289 ~ 23108067 (+)
G75069 NA non-coding upstream 22101 22994420 ~ 22994706 (+)
G75065 NA non-coding upstream 29485 22982892 ~ 22987322 (+)
G75045 NA non-coding upstream 91652 22924592 ~ 22925155 (+)
G75042 NA non-coding upstream 96704 22918752 ~ 22920103 (+)
G74769 NA non-coding upstream 761329 22255271 ~ 22255478 (+)
G75155 NA non-coding downstream 125347 23143942 ~ 23144165 (+)
G75192 NA non-coding downstream 309647 23328242 ~ 23328629 (+)
LOC120561704 NA non-coding downstream 313245 23331840 ~ 23332756 (+)
G75196 u2af2 non-coding downstream 321251 23339846 ~ 23342677 (+)
G75197 NA non-coding downstream 328245 23346840 ~ 23350767 (+)
cnot3a cnot3 other upstream 105287 22900089 ~ 22911520 (+)
myh14 NA other upstream 196754 22785578 ~ 22820053 (+)
LOC120562539 LOC102295960,LOC100711672,LOC102209551,LOC101487210,LOC102786116 other upstream 311391 22689070 ~ 22705416 (+)
LOC120562537 NA other upstream 348922 22660479 ~ 22667885 (+)
arnt NA other upstream 390854 22610018 ~ 22625953 (+)
LOC120562293 LOC103360151,LOC102310947,LOC102785150 other downstream 51992 23070587 ~ 23083147 (+)
LOC120562612 LOC103367657,LOC105025867,LOC103136704 other downstream 472530 23491125 ~ 23494034 (+)
trpv6 LOC104929027,LOC104960406,LOC103388006,LOC107082237 other downstream 542253 23560848 ~ 23571243 (+)
casp2 casp2,LOC102795506,LOC103369458 other downstream 622960 23641555 ~ 23651496 (+)
LOC120563204 NA other downstream 749638 23768233 ~ 23813408 (+)

Expression


Co-expression Network