G75199 (LOC103372680)


Basic Information

Item Value
gene id G75199
gene name LOC103372680
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 23351145 ~ 23354175 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU100585
GTCAAATTTATTGAATTTCAAAAACCTGGGTTTatcaaatttacaaaaaaatcacaaactTTTTATGACATGATAGAATTCTGACCACATTGCTTTAACtggaaattacaaaataaagtgctCAAAGGAAAGCCAGATTTTCTTTTATCTAAAAGACCATTTACTGCATTATATAGTTGCCCAGTTTCTGATGCTTAAAagagaataaataaatcatttttgcACACAATGTATGTACTATATATGTAATGGGTGGGattatacatatactgtatatgtgggaTATGCCAATGGCTGAAGGAACACCTTGTCTTAGCCTGTCTTTCCCACAGACAGGGTAAAACATACTACAGAAATTGTTAGCAATTTACTCCCCAATCATAAGCATTTTTCAGTGAATGGTAATGTTGGATATTACAGATAAATAAatctacatttttgtaaaaaatcaAATACTTTAATGACCTGTGTGTCTTACTATACATTTGGTGAGTGATAGGCAACTTTCAGTGAGATACACATTATACTCAACAGATATAAATATGAGACATACAAATGAGAAAAAACggattactgtttttttttaaacactgtacCCTGGAATGGTTTTACAAATTCTTCTTAGCACTTGCACGGCACCGTGCACTGTTTGCTTTTTAGTCATACAAACAATCAGACAGTGGCATAACTTCCACAGATTGAAGTACCTATCTGTTTACTTTTAGGAAAATTTAAGTCAAAAGCCACTGTATTCCACTGTTACCTAATCTGTTTTAATATAAGAGATCTCACAATGTTACTGTACTGGTATAAACACCACACATTAGTGTACAATATAATTAATGTTTGCTGCTTTGAAAATTTTGACTAGATCTCTATTAactatagggctgggtatcgttcaaaggTTTTTGATACCGGTACCGATGCCAATACTGTGACTTGGATACCGATTCAAAAACgttactttttttcgataccaacattttataaaacaaaaagaaattacaacattacacattacagcacaaatcttttctctctgtctctgtgcgtaacagggtttttcctgcatgcctTTACAACGTGTAATGTTAGACAGTAAAtcccagcattattagatcttagtaGAAGcttgctgcatgcttattggttcactgactctgatgagatttactcctaaGGTATTGACATTGGGTACTTCTACTGGAGCATTGGGAAGCTAGTTGCTTTTGCTGATTCTGTAACTCAAACTGtaacatgtttgtgttgtgtagttAATGCCCACAGTTTTTCTCACAGAACCAGAAGTTACACAAAGTTACATATAGCTAGTATAGTAAATGCTCTTTACTCTTTTACAAAAGGTATTGTTGCCACGAATGCATTACAGCAAGAGCCTCAATACCAGAAGCATAAGAAGTGAAACATTTTAGTGCGGATCATTTACAAAAAAGGCTTGGTACAACCCTTAGTGGAACAACAGAGTAATGCAGCAGTATTGCTGTTAAAACTGGGCCCAAGACCAACAGGTGTTGTCTGTCTTTGATTTTAAACTATAAACAAGTGGATCTTGTTGCCAGAAGTAtgttactgtaaaaaaacaaacacattttatagTCAGTTTGTTATATGTCCTACTCTTTAAGAGTTCGCCCCTCATTTAAaccaaaagaaaggaaaaagtaGTGTATTCAGGGAGTGAAAGTGGACCAAAACTGTCTCACACCAGGACATGACATAAATTGCATTAAAGCAAGTGAAAATAGTTGAGGATATAATGACAATGCCAAAAATAttacaacaaagacacacagagaaatataaacatacagtataattcTACAAAATCTATGGAGTGCAGCATAATTTTGTTCAGGAAAGCAaaggtctgtgtgtctctgcgaaCACTGAGGCTGAAACATGAATGAGCTAAGATGATTACACCAGCTAAGTACTGAAGAAAGGCAATCCCCTCTTTAATCCCAATAGTAAAGACACATTCTTGTACACAAATTCTAAATCACACAGACATGCCATTTTTGCTCTTTGAGCAATGAGAACCATGTTTTTTCCCTTTCCGGCTACAGCAGGCACTCCCATATCCTCAATATGGAACAATGGCGAGGAGGATTTGTCAAAGAAACTGACACCCTTTtgataataaaaatgaaattggaAAAGTGTAATTGTTTGAAAAGTAAAGGATCTCTGCCGCAGTTTACATGGCCATAATCGGGACGCTGAGATAGCAAAATAATTCCTCCTGCCTCTTGGCATCTCTCGGAGGTGAGCTGGCCTGCTGCAGCAAAAAATAACTGCCTCTTCTCTCCACACTTAACCACCAACTCCACTGTCTTTCTCTCCTCAGTGTCTAAACCTGTAGGAGATGGGCAGGAGCAGGTTATTTTTCTTCAGGGCCTGCACCCTGCTAAGTGTCTCCTCATCCAGGGCAGTGTAGCAGCGCCGGGCATAGTCCAGTAGCTTCTCCTTGGATGGATCAAACTCGCCCACCTCTGCCACCTTCTCTGGGGCCACTAGTAGCAGTTCAGCAATGGGTGTGGTGGAAGCCACCGTATTGCGGTCCACACCATGGATTTGGAAGGCTTTCGACATGTTTTTCAGACGCTGGGGCTCGGAAGACCCGCCTCCTTTTTAATTGATGTCTGTTGCTGTTAATGGTATCTTGCATTACATCTTCCCCTGATATCATTTCCTCCTCCTCGAGGTAACCGTCCTGTTCCAAGTACTCATCAGATTCTCCCAAGAGTGAAAGTGAATCTGAtgacaacataaaaaaatccCACAACATAAGTTTTTTCCCCTCCAATTTCC

Function

NR:

description
PREDICTED: coiled-coil domain-containing protein 106-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100585 True 2835 lncRNA 0.38 2 23351145 23354175

Neighbor

gene id symbol gene type direction distance location
cacng8b cacng8,LOC104960431,LOC105934996,LOC106536814 coding upstream 28384 23304312 ~ 23322761 (+)
cacng7b LOC103478058,LOC106931042,LOC107100306,LOC102228764,LOC105934928,LOC102193840 coding upstream 49120 23289137 ~ 23302025 (+)
prkcg LOC100699493,LOC102194125,LOC102306909,LOC102782677,LOC101481445,LOC101164921 coding upstream 64193 23269123 ~ 23286952 (+)
LOC120562649 LOC102193556,LOC102782376,LOC102306605,LOC101481152,LOC103478060,LOC108235494 coding upstream 94481 23205948 ~ 23256664 (+)
si:dkeyp-69b9.3 LOC104960480 coding upstream 209393 23129094 ~ 23141752 (+)
rcvrn2 LOC104929791,LOC103367647,LOC104960422 coding downstream 24430 23378605 ~ 23382673 (+)
isoc2 isoc2 coding downstream 38824 23392999 ~ 23395671 (+)
foxj2 NA coding downstream 41759 23395934 ~ 23401710 (+)
sbk3 sbk2,LOC100700842,LOC101487833,LOC102212418,LOC102777020 coding downstream 66172 23420347 ~ 23426645 (+)
mfap5 mfap5,LOC104934636,LOC104960418,LOC107082259,LOC105934952 coding downstream 79474 23433649 ~ 23437044 (+)
G75197 NA non-coding upstream 378 23346840 ~ 23350767 (+)
G75196 u2af2 non-coding upstream 8468 23339846 ~ 23342677 (+)
LOC120561704 NA non-coding upstream 18389 23331840 ~ 23332756 (+)
G75192 NA non-coding upstream 22516 23328242 ~ 23328629 (+)
G75155 NA non-coding upstream 206980 23143942 ~ 23144165 (+)
G75227 NA non-coding downstream 82921 23437096 ~ 23441226 (+)
G75301 NA non-coding downstream 140038 23494213 ~ 23494477 (+)
LOC120561968 NA non-coding downstream 277241 23631416 ~ 23633834 (+)
G75427 NA non-coding downstream 529002 23883177 ~ 23884631 (+)
G75483 ptpn6 non-coding downstream 589318 23943493 ~ 23948403 (+)
LOC120562293 LOC103360151,LOC102310947,LOC102785150 other upstream 267998 23070587 ~ 23083147 (+)
cnot3a cnot3 other upstream 439625 22900089 ~ 22911520 (+)
myh14 NA other upstream 531092 22785578 ~ 22820053 (+)
LOC120562539 LOC102295960,LOC100711672,LOC102209551,LOC101487210,LOC102786116 other upstream 645729 22689070 ~ 22705416 (+)
LOC120562537 NA other upstream 683260 22660479 ~ 22667885 (+)
LOC120562612 LOC103367657,LOC105025867,LOC103136704 other downstream 136950 23491125 ~ 23494034 (+)
trpv6 LOC104929027,LOC104960406,LOC103388006,LOC107082237 other downstream 206673 23560848 ~ 23571243 (+)
casp2 casp2,LOC102795506,LOC103369458 other downstream 287380 23641555 ~ 23651496 (+)
LOC120563204 NA other downstream 414058 23768233 ~ 23813408 (+)
LOC120563047 vamp1,LOC104928996 other downstream 519734 23873909 ~ 23879415 (+)

Expression


Co-expression Network