G75227


Basic Information

Item Value
gene id G75227
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 23437096 ~ 23441226 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU100617
tatatctttatgtttttctttgcaTATACATTTCCATATTCATATACAGTTTGAATAACAAGTAACATTTGGGAGAGATGCATATAATttaaacagtaaacaaacacTGACAGACATTGTTTAGGGCTTTACACTCACACAGTCTCTGTGTTCCAATCAAAATCTATCGTCACACCACTTGTCAGCTGTCACAACACACGTGCATGTGATACCAGTGCAACATAAGCCATCTCTCTGTACATGACAATATCACAACAAAACACTGCATCAAACACAGACTAGCTTGGTCCCACGTTGCATTTGCCTGCATCAGAATACCATTAACATTACATCTTAACATAGAATTGAAGTTCACAGTTAAAACCCAGTTTGTACAGTACAACATGCTGTGTGATTGAGGTCTGCGACCTGACCAccttctcaaaaaaaaaagaattaagcAGATGAATGTCTCCCCAGACTGACTGAACAGTGCAGAAACACAGACCTATTCATTGAGGAGAGAGGTCGTGACCTAAATGACTCACCAGTCGCAGCTTTAACAGCTGGGCTGAGTAGAGATGACATAACATGGACTAAATCATTTCTGTTTCCCCCTTGAGGCAAAGATAAAAGCACTTGATGCCTCTCTTTCTTTCGCTAACACCCATACCGCATCAAACATTCCTAATTCCCTGTCTCTTTGTACTGCTTTACAGTTAAAACAATGCACACAGTGCCAAGGACCCATCCCCCGTGAAATATGTGTTCAACAGCTGCAGCTCAATTTGAAATgtcctctcaaattgatgccgCAGAGCCACTAGAGAGCACAACTAGTCTGTAAATCAGCTTCTTTCAAGTAAAAATCATTTTGTGGTAAACTTCACCTTAACGTAAGTCGAATATTTGAACAATCCCTGTGTTAAATGCAGACTTTATGCATTACTAACTACATAGACAGAGTAGACTGCCAGTCAGTGCATATAGTCAGTCCCACTGCTGGGGACTTGAGAGATCAAATAAGCTACAGTACATACAGATGACAACACCAATGACAAGAATTACAAACTACCgacaatatatacatttaaaataaatattctcTGTACAGAAATTCATTCATtatatttaatttgatttcaTCAATCAGATGTTTCTGATTATGTCTCCCTTGCTCATATTTCTATTGTGTATACTCTACGATAGAAATcagcaaataaaacattaagacgaggacaaaaaagggaaaaagctgAATTCAAACGGGAAAATGGAAACTATAGAGCTAGATTGGATATacagaaggagagagtgaaGAGGATCCCCAAGTATGATGGGGGGCGGGCATAGCGTGATGGCCTATAGTTGTAAATCTTTCTAATTAAGACTGGATTATGAGGTCAGGGTGTATCTCTGGCTAAGAGCAAAAGCCATGAGGGACTGaactaaattaaaacaaactagCACAGGGGGTTACCCTGCTTGGCAGGGAGAGATACGGGACCCCATAACGGGGGGAAACAAAAGTAGCAAAATGTGCTGCATTGTATACAGAGAGATAAGTGGGAGACAAACAAAATGTATCCCTCCTCACTTCGTGGATACGGAGTCAAAGTCTCCCCACAGGTCCGAGCTGGCTGTGCTGGTGGGGTCGGAGGGAGCTGCTGAGTTGGAGTTACTGGTGTCCAGATCTAGCAAAAAAACCGGTGTCAGTTCCTCCTGCAGATGGTTGTGTGTTATGATTGGTAGATCTGGACGAAGGAGGTGGGGCTAACTTGCCCCCAGGAGGAGGTGGAAGAAGCCCAAAGCCACCTGAACTCTGCGGGCGGGACCTGTCCTTCTTTTTTGATTGCTGGAAAAGGTATAATTAGGAGAACCCAAAACTCAGTGAGTGTGTGGGTTTATAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100617 True 1892 lncRNA 0.42 2 23437096 23441226

Neighbor

gene id symbol gene type direction distance location
mfap5 mfap5,LOC104934636,LOC104960418,LOC107082259,LOC105934952 coding upstream 52 23433649 ~ 23437044 (+)
sbk3 sbk2,LOC100700842,LOC101487833,LOC102212418,LOC102777020 coding upstream 10451 23420347 ~ 23426645 (+)
foxj2 NA coding upstream 35386 23395934 ~ 23401710 (+)
isoc2 isoc2 coding upstream 41425 23392999 ~ 23395671 (+)
rcvrn2 LOC104929791,LOC103367647,LOC104960422 coding upstream 54423 23378605 ~ 23382673 (+)
slc2a3b LOC104960409,LOC101465952,LOC102775578,LOC101063282 coding downstream 57563 23498789 ~ 23508665 (+)
ephb6 ephb6,LOC102800023,LOC104960407 coding downstream 71329 23512555 ~ 23556483 (+)
m6pr NA coding downstream 152635 23593861 ~ 23600002 (+)
phc1 phc1 coding downstream 159876 23601102 ~ 23608496 (+)
clcn1b clcn1,LOC102795222 coding downstream 211342 23652568 ~ 23684905 (+)
G75199 LOC103372680 non-coding upstream 82921 23351145 ~ 23354175 (+)
G75197 NA non-coding upstream 86329 23346840 ~ 23350767 (+)
G75196 u2af2 non-coding upstream 94419 23339846 ~ 23342677 (+)
LOC120561704 NA non-coding upstream 104340 23331840 ~ 23332756 (+)
G75192 NA non-coding upstream 108467 23328242 ~ 23328629 (+)
G75301 NA non-coding downstream 52987 23494213 ~ 23494477 (+)
LOC120561968 NA non-coding downstream 190190 23631416 ~ 23633834 (+)
G75427 NA non-coding downstream 441951 23883177 ~ 23884631 (+)
G75483 ptpn6 non-coding downstream 502267 23943493 ~ 23948403 (+)
G75493 NA non-coding downstream 531101 23972327 ~ 23975734 (+)
LOC120562293 LOC103360151,LOC102310947,LOC102785150 other upstream 353949 23070587 ~ 23083147 (+)
cnot3a cnot3 other upstream 525576 22900089 ~ 22911520 (+)
myh14 NA other upstream 617043 22785578 ~ 22820053 (+)
LOC120562539 LOC102295960,LOC100711672,LOC102209551,LOC101487210,LOC102786116 other upstream 731680 22689070 ~ 22705416 (+)
LOC120562537 NA other upstream 769211 22660479 ~ 22667885 (+)
LOC120562612 LOC103367657,LOC105025867,LOC103136704 other downstream 49899 23491125 ~ 23494034 (+)
trpv6 LOC104929027,LOC104960406,LOC103388006,LOC107082237 other downstream 119622 23560848 ~ 23571243 (+)
casp2 casp2,LOC102795506,LOC103369458 other downstream 200329 23641555 ~ 23651496 (+)
LOC120563204 NA other downstream 327007 23768233 ~ 23813408 (+)
LOC120563047 vamp1,LOC104928996 other downstream 432683 23873909 ~ 23879415 (+)

Expression


Co-expression Network