G75523 (tpi1,tpi,LOC102304959)


Basic Information

Item Value
gene id G75523
gene name tpi1,tpi,LOC102304959
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 24048925 ~ 24052956 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU101023
tttctaaaCGGTTTATTGTGTTTCCTTACAGCCTTCCTACCCTTCTAACCATCGGCCATGACACAATATGATTAACATGTAATGGACGCTTCCCTCTTGGCAAAGAGCCAATGAGAGAGTGGATCATGCACGTCTACAGGGAGGTAAAAGCCACGAACCATCATAATTACACAAAAGAGACATCGATATTAAAGAGACAAATACATCCGATTGACAAAAAGCTGTGACACTGTTCACCCAAAAGAAAAGTTGGCAAACTTTTCAAAGTAAAGGCGAGGACTGGCCCGTCCACCTCAAGGTTTAATAATTGTCAAGTATTTCTAGCTTGAGCACTTGGTGTAAAGTTATTATGCACACAGAACTCTTTTCAGTGCGGTACTGTGCATGTGTCAACCTGTCCCTTTTCTTCATGACAAAtataccaacaaaaaaaaaaaaagaaaaaaggagggaaTGACATCATTACACaaatacttttaaataaaaaaggggaAGAGGACTAAGTGTTGAGAGTGAGGGGGTGATGGAACTGGATCGTCTGAACGGAGCTGGCCTCTGATCTGGACGTGGTCACATTGCAGTTGCCCAGGTTTTTATACCTTGGCGTTGATGATTTCGACAAACTCTGGCTTAAGGGAGGCTCCACCGACGAGGAAACCGTCGACATCCTTCTGGGAGCCAAGCTCTTTGCAGGTAGCACCAGTCACAGAGCCTCCATAGATGATCCTCACAGAGTTGGCTACAGCCTCAGACACGTTGGTTTTCAGCCACTGCCTCAGTTTATCGTGAACTTCCTGAGCCTGCTGTGGGGAAGCAGTCTTGCCGGTGCCAATTGCCCATACAGGCTCATAAGCAAGCACAACCTTGCTCCAGTCCTTTACGTTGTCTGCGATGAACTTAGTCTGAGCAAAGACGACCTTCTCGGTGATGCCGCCCTCTCTCTCATCCAGCTTCTCGCCGATGCAGGCGATGACACCGAGACCACTCTCCAGAGCGTGGGCGGTCTTCTGACCAATGagCTCATCACTCTCTCCGAAGACGTGGCGCCTCTCAGAGTGTCCCAGGATAACCCAGTTCACTCCGCAGTCCTTTATCATCGCAGGGCTAAACACAGATAATTatacaatttacacaaaataatCAAATCTGCTCCATTtaaatacagtttttaaaacaatattcTATATTTGCGATCTAACCACATAACCCAAAGCAttttgaatgaagtttatgaGGAGGTTATCTATCCATCTTTATTAGCTCAAAGCCTGGTTATTTTCCTCTGATGGACACATGACGTACCTGATCTCCCCAGTGAAGGCACCCTTGGCAACTTTGTAGCAGTTCTGAGCAGCAACGCCAAACTTAGCATCCAGCTTGGACCTGACAAAGTCCACCTTGGCTCCGTTCAGGGTCTGTATGAGCTCCCCCAGGCTTTTCTTGTCGCCGTTCAACTTCCAGTTTCCACCTACGAAGAATTTCCTGCTCATGATTGCGGGTTTTTAAGGGGACGTTTGCTGAGGGTTAAAACGGTTCCGACAGTCCACCGGGAGGTACCTTCTTGGGATAAGAGAGCGGACGTGAGAGAGTAGCTCAGAGTATTTATGAACATGGAA

Function

symbol description
tpi1 Enables protein homodimerization activity; triose-phosphate isomerase activity; and ubiquitin protein ligase binding activity. Involved in glyceraldehyde-3-phosphate biosynthetic process. Located in extracellular exosome and nucleus. Implicated in carbohydrate metabolic disorder and triosephosphate isomerase deficiency.
tpi Enables protein homodimerization activity and triose-phosphate isomerase activity. Involved in several processes, including determination of adult lifespan; glucose homeostasis; and glycolytic process. Located in M band and Z disc. Is expressed in several structures, including adult head; adult heart; muscle system; spermatozoon; and wing disc. Used to study neurodegenerative disease and triosephosphate isomerase deficiency. Human ortholog(s) of this gene implicated in carbohydrate metabolic disorder and triosephosphate isomerase deficiency. Orthologous to human TPI1 (triosephosphate isomerase 1).

NR:

description
PREDICTED: triosephosphate isomerase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101023 True 1616 lncRNA 0.46 6 24048925 24052956

Neighbor

gene id symbol gene type direction distance location
LOC120562699 eno2 coding upstream 23071 24019895 ~ 24025854 (+)
mlf2 mlf2 coding upstream 29830 24010883 ~ 24019095 (+)
wnt4b LOC104932544,LOC103356104,LOC101479331 coding upstream 46381 23998435 ~ 24002544 (+)
LOC120562185 NA coding upstream 111104 23921770 ~ 23937821 (+)
mrpl51 mrpl51,LOC102789637 coding upstream 177211 23869637 ~ 23871714 (+)
LOC120563208 NA coding downstream 1316 24054272 ~ 24054328 (+)
clstn3 clstn3,LOC102784285 coding downstream 21127 24074083 ~ 24098119 (+)
pex5 pex5,LOC102783438 coding downstream 46865 24099821 ~ 24113212 (+)
cdca3 NA coding downstream 62547 24115503 ~ 24118065 (+)
usp5 usp5,LOC102781302 coding downstream 82733 24135689 ~ 24151437 (+)
G75517 NA non-coding upstream 17586 24027883 ~ 24031339 (+)
G75493 NA non-coding upstream 73191 23972327 ~ 23975734 (+)
G75483 ptpn6 non-coding upstream 100522 23943493 ~ 23948403 (+)
G75427 NA non-coding upstream 164294 23883177 ~ 23884631 (+)
LOC120561968 NA non-coding upstream 415091 23631416 ~ 23633834 (+)
G75582 gnb3,LOC103375278 non-coding downstream 66361 24119317 ~ 24122009 (+)
G75583 NA non-coding downstream 69071 24122027 ~ 24125081 (+)
G75611 NA non-coding downstream 163184 24216140 ~ 24216569 (+)
G75622 flot1,LOC108235422 non-coding downstream 242882 24295838 ~ 24296723 (+)
LOC120562289 NA non-coding downstream 415878 24468834 ~ 24488842 (+)
atn1 atn1 other upstream 9498 24026915 ~ 24039427 (+)
LOC120563047 vamp1,LOC104928996 other upstream 169510 23873909 ~ 23879415 (+)
LOC120563204 NA other upstream 235517 23768233 ~ 23813408 (+)
casp2 casp2,LOC102795506,LOC103369458 other upstream 397429 23641555 ~ 23651496 (+)
trpv6 LOC104929027,LOC104960406,LOC103388006,LOC107082237 other upstream 477682 23560848 ~ 23571243 (+)
lpcat3 lpcat3 other downstream 3481 24056437 ~ 24073698 (+)
G75644 NA other downstream 382183 24435139 ~ 24436819 (+)
dedd1 dedd2 other downstream 467779 24520735 ~ 24534276 (+)
grik5 grik5 other downstream 753333 24806289 ~ 24885373 (+)
LOC120561858 NA other downstream 862298 24915254 ~ 24996309 (+)

Expression


Co-expression Network