G76089


Basic Information

Item Value
gene id G76089
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 25624430 ~ 25701085 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU101807
ttttttattttgtcgtGCTTTGTATCTTTTCCCCTATAAAGAAATAGTTAGCTATATATCAACAATGACACATGGACTCTAAAATAAACAAGAGTGAAAGACAGGAGAAGAGACGACTAGGCACAGGAGACGAAGAGAGAGACtgggaaagagaggaaaggtaAGAGTGAAAACGGACAGCAATTTCTCTACAGTAGAACTAAAAACAAACCATGGGAAGTGTACATTTCTTTAACATTtacaattataataataacaacgacaataataataacattaacaataatCATAATTGttcaaacaataataataattcattaaaaaaaccCATAAGACCTCTGGTTTCTCATAAAgacaaatgattttttttattcttttctttattttctttaaagatcACTGGACAGTGGTTTGTTCGGCTTTACACCTCTATAGGCTAATATTCTGTGTTAGTATAGTTGCTTCATAATGCGTTTCAatagtaaacattttttttttatttcttaaaagtttcatttaatttatgttgctgttctttttttatacaaataaggAATTCAGAGATATGTATACTTGTTCTGTCAACatgtttactgtatgtatgaatgtgtgcatgtatcTGCATATGTGTGGTAGCATTCAGAAAAAATATCcatccattttattttctgaTTCATTCAATCCCCTTGCCCTTCTTATTAAGACTTTTAAACCTTATCCTCTTAATGGCATTCTAAAATAATTAAGCTTTTCTGTAATGCCTTAGCAAGTCATATTCCCTTCTTCTTCGCAGCCCAACACTAATCCTTTCATTATTAGGAGCCAACAAAGGAGAAAGGATAGAGGggggcagagagaaagagaaatataAGGGAGAGGGTGGTAACAGGTGAGCAGAGAGAAAGGAGGTGATGGAGGGTCAATTAGATGAAAAGAGAATGACCTTTTCCTCACTGTTGCAGCGAGAGGGAAAAAGAAATCACTAAAAGATGACTCCTTTTCACAAATTATTGACAGGTCACCCAATAGGGATAGCAAAACAGGACGGTTAGCTTGTCCATAAAGCCTGGATACTTCCCAGGACTGGGCTGAGCACTCCATTGCTGTAGGGAACTATAAGTTGCGCTCTGTAGGAAAGATGCTttggcaatttaaaaaaaaaaaaaaatcaattttctaGCATCTAGCGCTCAATAGCTCTTGGTAACCCCCTTACACACAGCTCCCACTGTCTCCATAAGTTAAAGATTGGGCTTTGTGAAATAGCTGATTTTCTGCAGGTATTGAATTACAGCAGTCATCTGCCTCTAATTCCCCTTCCACTTTTGTGGTTGCAAGGGCAGAGTGCCTGTATTCGTAGTgctccccgcttccccctcgaTCAACATAATTATGTCCTCATTTCGTTATTGTCTGCATTCACCTAACCCTCTCCCCCACTCCCTCCATTTTCCCCAGTTTATCAGACTTACAGTATATGGCGCAGTTGTTAATGGCTGGTGGGTCTATAGGCTCTCTTTTTCTCAGTCTGTctatgggtatgtgtgtgtgcatggaggATATGGAGTGGAATGTAACGGGATGGATTTGCTGTGTGCAGTATCTGTATACAGTCGTTTTTAGAAGGCCGCCTGTTATGGCGCTTTGTATAgaagtgtgtatttgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtata
>TU101811
ttttttattttgtcgtGCTTTGTATCTTTTCCCCTATAAAGAAATAGTTAGCTATATATCAACAATGACACATGGACTCTAAAATAAACAAGAGTGAAAGACAGGAGAAGAGACGACTAGGCACAGGAGACGAAGAGAGAGACtgggaaagagaggaaaggtaAGAGTGAAAACGGACAGCAATTTCTCTACAGTAGAACTAAAAACAAACCATGGGAAGTGTACATTTCTTTAACATTtacaattataataataacaacgacaataataataacattaacaataatCATAATTGttcaaacaataataataattcattaaaaaaaccCATAAGACCTCTGGTTTCTCATAAAgacaaatgattttttttattcttttctttattttctttaaagatcACTGGACAGTGGTTTGTTCGGCTTTACACCTCTATAGGCTAATATTCTGTGTTAGTATAGTTGCTTCATAATGCGTTTCAatagtaaacattttttttttatttcttaaaagtttcatttaatttatgttgctgttctttttttatacaaataaggAATTCAGAGATATGTATACTTGTTCTGTCAACatgtttactgtatgtatgaatgtgtgcatgtatcTGCATATGTGTGGTAGCATTCAGAAAAAATATCcatccattttattttctgaTTCATTCAATCCCCTTGCCCTTCTTATTAAGACTTTTAAACCTTATCCTCTTAATGGCATTCTAAAATAATTAAGCTTTTCTGTAATGCCTTAGCAAGTCATATTCCCTTCTTCTTCGCAGCCCAACACTAATCCTTTCATTATTAGGAGCCAACAAAGGAGAAAGGATAGAGGggggcagagagaaagagaaatataAGGGAGAGGGTGGTAACAGGTGAGCAGAGAGAAAGGAGGTGATGGAGGGTCAATTAGATGAAAAGAGAATGACCTTTTCCTCACTGTTGCAGCGAGAGGGAAAAAGAAATCACTAAAAGATGACTCCTTTTCACAAATTATTGACAGGTCACCCAATAGGGATAGCAAAACAGGACGGTTAGCTTGTCCATAAAGCCTGGATACTTCCCAGGACTGGGCTGAGCACTCCATTGCTGTAGGGAACTATAAGTTGCGCTCTGTAGGAAAGATGCTttggcaatttaaaaaaaaaaaaaaatcaattttctaGCATCTAGCGCTCAATAGCTCTTGGTAACCCCCTTACACACAGCTCCCACTGTCTCCATAAGTTAAAGATTGGGCTTTGTGAAATAGCTGATTTTCTGCAGGTATTGAATTACAGCAGTCATCTGCCTCTAATTCCCCTTCCACTTTTGTGGTTGCAAGGGCAGAGTGCCTGTATTCGTAGTgctccccgcttccccctcgaTCAACATAATTATGTCCTCATTTCGTTATTGTCTGCATTCACCTAACCCTCTCCCCCACTCCCTCCATTTTCCCCAGTTTATCAGACTTACAGTATATGGCGCAGTTGTTAATGGCTGGTGGGTCTATAGGCTCTCTTTTTCTCAGTCTGTctatgggtatgtgtgtgtgcatggaggATATGGAGTGGAATGTAACGGGATGGATTTGCTGTGTGCAGTATCTGTATACAGTCGTTTTTAGAAGGCCGCCTGTTATGGCGCTTTGTATAgaagtgtgtatttgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgatttgtgcacctatgtgcttgtgtgtataCGAGTGGAAAATGAAGTTGAATATATAAATACTAATATGGCACAGATTTAAGCGAGGCTAAAGCCTGTGAGTGTGCCTAAAAAATGCCACTAATGTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101807 False 1701 lncRNA 0.38 2 25624430 25696175
TU101811 True 1837 lncRNA 0.38 2 25624430 25701085

Neighbor

gene id symbol gene type direction distance location
LOC120562605 LOC104951102 coding upstream 114137 25506451 ~ 25510293 (+)
apoa2 NA coding upstream 124966 25497690 ~ 25499464 (+)
apoc4 NA coding upstream 127784 25495718 ~ 25496646 (+)
apoeb NA coding upstream 136538 25485559 ~ 25487892 (+)
LOC120562741 NA coding upstream 143723 25479261 ~ 25480707 (+)
cited4b LOC104958901,LOC106523762 coding downstream 173592 25874677 ~ 25877640 (+)
LOC120563139 LOC106907557,LOC103141567,LOC106948827,LOC107084787,LOC103477829,LOC102227399,LOC102310127,LOC102211983 coding downstream 329678 26030763 ~ 26044380 (+)
themis2 NA coding downstream 349568 26050653 ~ 26058431 (+)
smpdl3b smpdl3b coding downstream 363938 26065023 ~ 26068354 (+)
LOC120561982 maneal,LOC102777073 coding downstream 387868 26088953 ~ 26104684 (+)
G76083 rps19,LOC106942871,LOC103477840,LOC102304814,LOC102192408 non-coding upstream 6952 25606150 ~ 25617478 (+)
G76055 NA non-coding upstream 27976 25542399 ~ 25596454 (+)
G75977 NA non-coding upstream 277214 25346263 ~ 25347216 (+)
LOC120561670 NA non-coding upstream 288472 25335016 ~ 25335958 (+)
G75943 NA non-coding upstream 479626 25144579 ~ 25144804 (+)
G76109 NA non-coding downstream 101427 25802512 ~ 25804190 (+)
G76113 LOC101165095,LOC108235336 non-coding downstream 120528 25821613 ~ 25822239 (+)
G76125 NA non-coding downstream 154669 25855754 ~ 25856690 (+)
G76126 NA non-coding downstream 155715 25856800 ~ 25857528 (+)
G76128 NA non-coding downstream 166201 25867286 ~ 25867490 (+)
apoc2 NA other upstream 120378 25502600 ~ 25504052 (+)
apoc1 NA other upstream 131168 25491784 ~ 25493262 (+)
LOC120561674 LOC104943405,LOC103477911,LOC108235491,LOC108235490,LOC102233864,LOC107379681 other upstream 243632 25374207 ~ 25380798 (+)
LOC120561858 NA other upstream 628121 24915254 ~ 24996309 (+)
grik5 grik5 other upstream 739057 24806289 ~ 24885373 (+)
taf12 taf12 other downstream 91733 25792818 ~ 25795519 (+)
G76192 NA other downstream 438816 26139901 ~ 26142627 (+)
LOC120562432 LOC101064911,LOC106524684,LOC104919574,LOC106098620,LOC102206486,LOC108235477,LOC102229209,LOC108166993 other downstream 944299 26645384 ~ 26647615 (+)
G76315 NA other downstream 1107033 26808118 ~ 26815391 (+)
G76355 snip1 other downstream 1182365 26883450 ~ 26886546 (+)

Expression


Co-expression Network