LOC120562432 (LOC101064911,LOC106524684,LOC104919574,LOC106098620,LOC102206486,LOC108235477,LOC102229209,LOC108166993)


Basic Information

Item Value
gene id LOC120562432
gene name LOC101064911,LOC106524684,LOC104919574,LOC106098620,LOC102206486,LOC108235477,LOC102229209,LOC108166993
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 26645384 ~ 26647615 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU102048
CTAAACAGTTCCGACAACTGCGTGCATTCTCTATACTTAGATCTAATGTGAGATTGGAGACCATTTAATTTGAAGGCTTCACTTCCTAACATACGTGTTCCAGTGATCTGTAGCTCTTTGTGATTATACCCGATATCAGCCTCAAAGCAAAGCAGCAGTTCTCATTAATAgtctgattttgtcagtcaatAACCACAGATCTTTGTCATTTTCAGAAACAGCAGTTTGTTGGCCAACTAGCATTTCACAACTCAAGCTCGTCACAGCTTCCTGTGTGGTGCACAGTTTCTCAGTTTGATCAGGAGGAGTGCACGCTTAACAGACTCTTCTGGCAgctaaatcaaaaaaaaaaaaaaaaacccccaaaccAAAAAAACCCAGTGGTCACCCATCAACCAGGTGCAGGCGGCTATGGGACAAATGTCCAAACAGGAGAGTGGAGCACGGGCCTGTGCTCCTGCTGCAGTGACTTGTTTGTCTGTGCTCTTGGTTGCTGCTGTCCACTTGCATTGAGCTGCTACACAGCAAATAAGTATggagaaaactgctgtttgggTTGTGTGCCAGGAGGTTCAACAGCTATTAGGACTCACATGAGACTGACTTATGGTATTCAGGGAACCATAACAAATGATGCCTTGATGACCTTTTTCTGCGGATTGTGTGAGATGTGCAGGATGGCGCGAGAAATACGCATCAGAAATGGAGACATTTCATCTTAAGAAGGCATAAAGGATTCTGGTCCAcagtattttctgtttgttgATGATGTCCAGCTATTGTGGAAGGAATTTGTTAATTCTTGTAGCAGGCCTAGCTTTCGTGCATGCAACAAAGAATGAGCAGCTTATTAATTATGCAATTCAGTGTATTACATGTTATATTTTACCTGTAACCTTGTATGTACCAGTCTAACTGTTTGACAGTGTTAGTACTATCTgcattactgtaaataaactgCATTTTTCACACTCACAACATGATTAATTACATTTAAGAATGAGCAGCTTATTAATTATGCAATTCAGTGTATTAAATGTTATATTTTACCAGTAACCTTATATGTACCAGTCTGTTTGACAGTGTTAGTACTATCTgcattactgtaaataaactgCATTTTTCACACTCACAACATGattaattacatttaagcatg
>TU102049
CTAAACAGTTCCGACAACTGCGTGCATTCTCTATACTTAGATCTAATGTGAGATTGGAGACCATTTAATTTGAAGGCTTCACTTCCTAACATACGTGTTCCAGTGATCTGTAGCTCTTTGTGATTATACCCGATATCAGCCTCAAAGCAAAGCAGCAGTTCTCATTAATAgtctgattttgtcagtcaatAACCACAGATCTTTGTCATTTTCAGAAACAGCAGTTTGTTGGCCAACTAGCATTTCACAACTCAAGCTCGTCACAGCTTCCTGTGTGGTGCACAGTTTCTCAGTTTGATCAGGAGGAGTGCACGCTTAACAGACTCTTCTGCTTTTCCACCTGCAACAAACTGCACATTTGCTCCATTCCAGTGCTAACAGCTGAATGTGTTCTTAACTAGGCAgctaaatcaaaaaaaaaaaaaaaaacccccaaaccAAAAAAACCCAGTGGTCACCCATCAACCAGGTGCAGGCGGCTATGGGACAAATGTCCAAACAGGAGAGTGGAGCACGGGCCTGTGCTCCTGCTGCAGTGACTTGTTTGTCTGTGCTCTTGGTTGCTGCTGTCCACTTGCATTGAGCTGCTACACAGCAAATAAGTATggagaaaactgctgtttgggTTGTGTGCCAGGAGGTTCAACAGCTATTAGGACTCACATGAGACTGACTTATGGTATTCAGGGAACCATAACAAATGATGCCTTGATGACCTTTTTCTGCGGATTGTGTGAGATGTGCAGGATGGCGCGAGAAATACGCATCAGAAATGGAGACATTTCATCTTAAGAAGGCATAAAGGATTCTGGTCCAcagtattttctgtttgttgATGATGTCCAGCTATTGTGGAAGGAATTTGTTAATTCTTGTAGCAGGCCTAGCTTTCGTGCATGCAACAAAGAATGAGCAGCTTATTAATTATGCAATTCAGTGTATTACATGTTATATTTTACCTGTAACCTTGTATGTACCAGTCTAACTGTTTGACAGTGTTAGTACTATCTgcattactgtaaataaactgCATTTTTCACACTCACAACATGATTAATTACATTTAAGAATGAGCAGCTTATTAATTATGCAATTCAGTGTATTAAATGTTATATTTTACCAGTAACCTTATATGTACCAGTCTGTTTGACAGTGTTAGTACTATCTgcattactgtaaataaactgCATTTTTCACACTCACAACATGattaattacatttaagcatg
>XM_039806146.1
ATGGAAAGATTGATGCAgctaaatcaaaaaaaaaaaaaaaaacccccaaaccAAAAAAACCCAGTGGTCACCCATCAACCAGGTGCAGGCGGCTATGGGACAAATGTCCAAACAGGAGAGTGGAGCACGGGCCTGTGCTCCTGCTGCAGTGACTTGTTTGTCTGTGCTCTTGGTTGCTGCTGTCCACTTGCATTGAGCTGCTACACAGCAAATAAGTATggagaaaactgctgtttgggTTGTGTGCCAGGAGGTTCAACAGCTATTAGGACTCACATGAGACTGACTTATGGTATTCAGGGAACCATAACAAATGATGCCTTGATGACCTTTTTCTGCGGATTGTGTGAGATGTGCAGGATGGCGCGAGAAATACGCATCAGAAATGGAGACATTTCATCTTAAGAAGGCATAAAGGATTCTGGTCCAcagtattttctgtttgttgATGATGTCCAGCTATTGTGGAAGGAATTTGTTAATTCTTGTAGCAGGCCTAGCTTTCGTGCATGCAACAAAGAATGAGCAGCTTATTAATTATGCAATTCAGTGTATTACATGTTATATTTTACCTGTAACCTTGTATGTACCAGTCTAACTGTTTGACAGTGTTAGTACTATCTgcattactgtaaataaactgCATTTTTCACACTCACAACATGATTAATTACATTTAAGAATGAGCAGCTTATTAATTATGCAATTCAGTGTATTAAATGTTATATTTTACCAGTAACCTTATATGTACCAGTCTGTTTGACAGTGTTAGTACTATCTgcattactgtaaataaactgCATTTTTCACACTCACAACATGattaattacatttaagcatgaaCCATTTTGTACAAcattgtcaataaaaaaatagattGTTTAA

Function

NR:

description
PREDICTED: cornifelin homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102048 False 1159 lncRNA 0.40 4 26645384 26647571
TU102049 True 1229 lncRNA 0.40 4 26645384 26647571
XM_039806146.1 False 886 mRNA 0.38 4 26646267 26647615

Neighbor

gene id symbol gene type direction distance location
mrps15 mrps15,LOC102779357 coding upstream 1157 26635677 ~ 26644227 (+)
csf3r NA coding upstream 11084 26622347 ~ 26634300 (+)
LOC120562650 NA coding upstream 32002 26611986 ~ 26613382 (+)
LOC120562714 grik3,LOC102778608 coding upstream 217732 26316867 ~ 26427652 (+)
LOC120563082 NA coding upstream 472970 26168464 ~ 26172414 (+)
oscp1b oscp1,LOC106583166,LOC102779645 coding downstream 597 26648212 ~ 26655099 (+)
stk40 stk40,LOC103141542 coding downstream 9338 26656953 ~ 26675492 (+)
eva1ba eva1b,LOC104941913 coding downstream 64834 26712449 ~ 26725090 (+)
dnali1 dnali1 coding downstream 238953 26886568 ~ 26889835 (+)
rspo1 rspo1 coding downstream 295621 26943236 ~ 26955284 (+)
LOC120562862 NA non-coding upstream 45273 26576712 ~ 26600111 (+)
G76251 NA non-coding upstream 358884 26286300 ~ 26286500 (+)
G76246 NA non-coding upstream 430019 26215081 ~ 26215365 (+)
LOC120563083 NA non-coding upstream 477697 26155861 ~ 26167687 (+)
G76193 NA non-coding upstream 492081 26151993 ~ 26153303 (+)
G76276 NA non-coding downstream 29380 26676995 ~ 26677217 (+)
G76313 NA non-coding downstream 83691 26731306 ~ 26732902 (+)
G76338 NA non-coding downstream 217105 26864720 ~ 26865555 (+)
G76393 NA non-coding downstream 367525 27015140 ~ 27016107 (+)
G76412 NA non-coding downstream 409168 27056783 ~ 27057005 (+)
G76192 NA other upstream 502757 26139901 ~ 26142627 (+)
taf12 taf12 other upstream 849865 25792818 ~ 25795519 (+)
apoc2 NA other upstream 1141332 25502600 ~ 25504052 (+)
apoc1 NA other upstream 1152122 25491784 ~ 25493262 (+)
LOC120561674 LOC104943405,LOC103477911,LOC108235491,LOC108235490,LOC102233864,LOC107379681 other upstream 1264586 25374207 ~ 25380798 (+)
G76315 NA other downstream 160503 26808118 ~ 26815391 (+)
G76355 snip1 other downstream 235835 26883450 ~ 26886546 (+)
G76417 NA other downstream 636923 27284538 ~ 27288457 (+)
fam110d LOC104924711,LOC103367059 other downstream 1219829 27867444 ~ 27885464 (+)
G76511 NA other downstream 1301268 27948883 ~ 27952580 (+)

Expression


Co-expression Network