G76393


Basic Information

Item Value
gene id G76393
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 27015140 ~ 27016107 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU102202
CTTGTGGTTGACCTCATTAGTTAATTgacgttgagttttttttaaatgggtttgTTGCCAATGGAAAGACTTAAGAAATAGTAAGAGTCTCTTACTATTTCTTAAGTCTCTTACTAAGAGACAACGGCATGATTAATGAAAGAGGCCTCAGGCTGAATTTAAACTGAGGATGTCGTACATGCTCTGGGGCAACTGAGCCATCACAACTGTGGCAGTAGATTGCATTTTGTTCTCTTACCAGTAGGTGGCATTAGTGTTCTTTATCACGCTAtttggaggggtggggggggaaaaTCTGTTGGTTACTGACGACGCTGAAACATGCATAGAGAGAAGACTAAGCTGGAAGTCACTTGTATGACCCAACATCAAGACTTCAGAGTTTAACTGTGGTTATGTTTTTTGTGAGCTGTCACTGATGTGTTCTGTCTTTGCGTGTGTCACAAACGGCTCTCTAGTTTAATAAGTTGTGAACTGAGGAGCTGAACCCCCTCATTCACATTTCAGACCTGTCATAATAGACCGTGATGTTCCATTTCAAAGGCTTCTCCAAAGATTTGCTAAGAAATGCGAGAAGAGTTCTTTTTCTGACAGAATTTGAAGGACACAACTTTGGCGGCCCTCAGTATTCCACAGCTCATTGCAAGCGAGTCGGCTGCATTCAGGTTGTCCTCGATAAGTCAGAAAGTATCACGTGTCCATGTCATATTCATCCGGTATTTGCATTCATGTGGTCATCAGTCACTGATAAAATTGGTGAACAAATGAAAAGGCCACTCAAAGGTGTAAATCGGGGGTCTTCAACGTCTTTTAGGCCAGGGACCCCTTAGTTGAAAGAGAGACcgagtagggaccccctaccGCATATTGTATACAATTGAGTTGCATGTTAAACTG
>TU102206
GCATAGAGAGAAGACTAAGCTGGAAGTCACTTGTATGACCCAACATCAAGACTTCAGAGTTTAACTGTGGTTATGTTTTTTGTGAGCTGTCACTGATGTGTTCTGTCTTTGCGTGTGTCACAAACGGCTCTCTAGTTTAATAAGTTGTGAACTGAGGAGCTGAACCCCCTCATTCACATTTCAGACCTGTCATAATAGACCGTGATGTTCCATTTCAAAGGCTTCTCCAAAGATTTGCTAAGAAATGCGAGAAGAGTTCTTTTTCTGACAGAATTTGAAGGACACAACTTTGGCGGCCCTCAGTATTCCACAGCTCATTGCAAGCGAGTCGGCTGCATTCAGGTTGTCCTCGATAAGTCAGAAAGTATCACGTGTCCATGTCATATTCATCCGGTATTTGCATTCATGTGGTCATCAGTCACTGATAAAATTGGTGAACAAATGAAAAGGCCACTCAAAGGTGTAAATCGGGGGTCTTCAACGTCTTTTAGGCCAGGGACCCCTTAGTTGAAAGAGAGACcgagtagggaccccctaccGCATATTGTATACAATTGAGTTGCATGTTAAACTGGGCAGAATGGATGAAAATAAATGGATATTATGtatgcatcatgttttaatgttaaacatacaccCAGAAGG

Function

GO: NA

KEGG:

id description
ko03018 RNA degradation

RNA

RNA id representative length rna type GC content exon number start site end site
TU102202 True 897 lncRNA 0.43 1 27015140 27016036
TU102206 False 645 lncRNA 0.42 1 27015463 27016107

Neighbor

gene id symbol gene type direction distance location
utp11 utp11 coding upstream 38 27013093 ~ 27015102 (+)
rspo1 rspo1 coding upstream 59856 26943236 ~ 26955284 (+)
dnali1 dnali1 coding upstream 125305 26886568 ~ 26889835 (+)
eva1ba eva1b,LOC104941913 coding upstream 290050 26712449 ~ 26725090 (+)
stk40 stk40,LOC103141542 coding upstream 339648 26656953 ~ 26675492 (+)
LOC120561567 mycbp coding downstream 287203 27303310 ~ 27305006 (+)
pnrc2 pnrc2,LOC100697533,LOC104941893,LOC101487357 coding downstream 335744 27351851 ~ 27355833 (+)
si:dkeyp-97a10.3 NA coding downstream 1031536 28047643 ~ 28059160 (+)
LOC120562747 LOC103369304,LOC107379318,LOC104956022,LOC100707205,LOC107082966 coding downstream 1058083 28074190 ~ 28077263 (+)
etfb etfb coding downstream 1246760 28262867 ~ 28272836 (+)
G76338 NA non-coding upstream 149585 26864720 ~ 26865555 (+)
G76313 NA non-coding upstream 282238 26731306 ~ 26732902 (+)
G76276 NA non-coding upstream 337923 26676995 ~ 26677217 (+)
LOC120562862 NA non-coding upstream 415029 26576712 ~ 26600111 (+)
G76251 NA non-coding upstream 728640 26286300 ~ 26286500 (+)
G76412 NA non-coding downstream 40676 27056783 ~ 27057005 (+)
G76418 NA non-coding downstream 256451 27272558 ~ 27272827 (+)
G76419 NA non-coding downstream 274061 27290168 ~ 27291432 (+)
G76437 NA non-coding downstream 310971 27327078 ~ 27330040 (+)
G76426 NA non-coding downstream 346172 27362279 ~ 27363012 (+)
G76355 snip1 other upstream 128594 26883450 ~ 26886546 (+)
G76315 NA other upstream 199749 26808118 ~ 26815391 (+)
LOC120562432 LOC101064911,LOC106524684,LOC104919574,LOC106098620,LOC102206486,LOC108235477,LOC102229209,LOC108166993 other upstream 367525 26645384 ~ 26647615 (+)
G76192 NA other upstream 872513 26139901 ~ 26142627 (+)
taf12 taf12 other upstream 1219621 25792818 ~ 25795519 (+)
G76417 NA other downstream 268431 27284538 ~ 27288457 (+)
fam110d LOC104924711,LOC103367059 other downstream 851337 27867444 ~ 27885464 (+)
G76511 NA other downstream 932776 27948883 ~ 27952580 (+)
ago1 ago1,LOC102230823,LOC103367053,LOC107379324,LOC103388087,LOC107082980,LOC101466039,LOC104959479 other downstream 946583 27962690 ~ 27983714 (+)
LOC120561771 LOC103367052,LOC101466533,LOC107379323,LOC100706402,LOC103139281 other downstream 967946 27984053 ~ 28027526 (+)

Expression


Co-expression Network