G76426


Basic Information

Item Value
gene id G76426
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 27362279 ~ 27363012 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU102246
TTATTAAGCAACACTTTTATTTAAATAGACATTGGTTTCTTCACTGCCAAGTTTACATCTTTTTGCTTTTCCTGATGAGAGTTGTTGAACCCATGGTCAAAGTCTGAAAGGGAAAATTAATCATATTTCATTTATGGGCAGCATaggctacattaggctacattaTGTAAGCTTATGATACATTAATGTGAAACAGAAAGAGTGAGTTCTGGTAAGATATATGCTACCGCACCTCTACCATCTCTGCTCCCTTAAGCTCTTGGATGTGGCAGAACTTTCCGGTATTGCAAACCAGTTTGCCACCCTCCAGATTGACAATGCACTGAGCTTCTTGCCGTCCATGGTGGTGATCTCAGCCTCCTTGCCGACGGTAAAGGAGTTGGTCACAGACTTTCCAGGGGTCTTGGAGGTGACAACAAAGTCATTGCCTTTCTGCTTGATCTCAGTAATTGGCTTAATGTCCTTGGCCATCTTAATTATATCTTCTGGGAGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102246 True 494 lncRNA 0.41 2 27362279 27363012

Neighbor

gene id symbol gene type direction distance location
pnrc2 pnrc2,LOC100697533,LOC104941893,LOC101487357 coding upstream 6446 27351851 ~ 27355833 (+)
LOC120561567 mycbp coding upstream 57273 27303310 ~ 27305006 (+)
utp11 utp11 coding upstream 347177 27013093 ~ 27015102 (+)
rspo1 rspo1 coding upstream 406995 26943236 ~ 26955284 (+)
dnali1 dnali1 coding upstream 472444 26886568 ~ 26889835 (+)
si:dkeyp-97a10.3 NA coding downstream 684631 28047643 ~ 28059160 (+)
LOC120562747 LOC103369304,LOC107379318,LOC104956022,LOC100707205,LOC107082966 coding downstream 711178 28074190 ~ 28077263 (+)
etfb etfb coding downstream 899855 28262867 ~ 28272836 (+)
vsig10l NA coding downstream 911061 28274073 ~ 28279197 (+)
LOC120562954 LOC103375369 coding downstream 984598 28347610 ~ 28354162 (+)
G76437 NA non-coding upstream 32239 27327078 ~ 27330040 (+)
G76419 NA non-coding upstream 70847 27290168 ~ 27291432 (+)
G76418 NA non-coding upstream 89452 27272558 ~ 27272827 (+)
G76412 NA non-coding upstream 305274 27056783 ~ 27057005 (+)
G76393 NA non-coding upstream 346172 27015140 ~ 27016107 (+)
G76450 NA non-coding downstream 138944 27501956 ~ 27502357 (+)
G76451 NA non-coding downstream 157680 27520692 ~ 27521513 (+)
G76445 LOC103356458,LOC107729795,LOC105006133 non-coding downstream 192832 27555844 ~ 27565331 (+)
G76464 NA non-coding downstream 422183 27785195 ~ 27790404 (+)
G76465 NA non-coding downstream 429760 27792772 ~ 27793211 (+)
G76417 NA other upstream 73822 27284538 ~ 27288457 (+)
G76355 snip1 other upstream 475733 26883450 ~ 26886546 (+)
G76315 NA other upstream 546888 26808118 ~ 26815391 (+)
LOC120562432 LOC101064911,LOC106524684,LOC104919574,LOC106098620,LOC102206486,LOC108235477,LOC102229209,LOC108166993 other upstream 714664 26645384 ~ 26647615 (+)
G76192 NA other upstream 1219652 26139901 ~ 26142627 (+)
fam110d LOC104924711,LOC103367059 other downstream 504432 27867444 ~ 27885464 (+)
G76511 NA other downstream 585871 27948883 ~ 27952580 (+)
ago1 ago1,LOC102230823,LOC103367053,LOC107379324,LOC103388087,LOC107082980,LOC101466039,LOC104959479 other downstream 599678 27962690 ~ 27983714 (+)
LOC120561771 LOC103367052,LOC101466533,LOC107379323,LOC100706402,LOC103139281 other downstream 621041 27984053 ~ 28027526 (+)
G76581 LOC101157563,LOC103369309 other downstream 878771 28241783 ~ 28245161 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G128052 NA non-coding NC_053123.1 CM020920.1 29995024 ~ 29996113 (+)
bowfin (Amia calva) G137027 NA non-coding CM030138.1 CM030138.1 19020158 ~ 19026005 (+)
tiger barb (Puntius tetrazona) G116632 fabp10a,LOC107677662,LOC103026354 misc NC_056714.1 CM032083.1 26810317 ~ 26812974 (-)