fam110d (LOC104924711,LOC103367059)


Basic Information

Item Value
gene id fam110d
gene name LOC104924711,LOC103367059
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 27867444 ~ 27885464 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU102340
GGAACAAACATGCGAGGCACCCCTGTGGGGTTGTTAATGCACTGAactgcacagagagagaggaaatgaaagataGACATATAGCGTTGACTCTTTACAGAGATTCATCTCATATAACGTTAAACACTGAGCTGGATTCAAAGGACCACCCGCATTATGGTAGACAAAGAGCCATGCATGGCCAGTAATTTCCATCATTTTCATCTCATTTTCTAAATTCTAAAGATGACTTTCACACAGTATAAACACTGTCCAATAATCACTTGCGACACACTCATTGATTACCACAGCAAATCCTTCATGCATGTTCAGTGCTCACAGCTGTGTAAGCTATATGGTAGCACGATGAGCAAGAGGGAAAGATTCCTGTCAAGCAAATATAAGCACAATGAGAATTTAAATCTCACaaaagaagtttaaaaaaatgaagacaatttcataaaaaaataatctattcaCCTCCAAAAGTAAAGGAGCTCAAGTTGTCAAACCTTTACTGCGAAATGTTTTAGGATGTCACTTTCACCATCTGGCAGTTTACGGACGTTCAACCTTCCCAGCTGGCTCAGTCAGCCCGTTTCCCATCAAAACAAGCAGTGGAGGCTGAAGCCGCCCTCCTTTCTCTGATAACCAGAGATCCTACCTCACTTCATCCATCCTTCAGTGATTCTCACTTTATCTCCATGAAAGGTCAATCCATTGCTTGGCCTGTAGGATTCCACTGAAATATGAACTGGGGGTGTGCCGAGGTATGCAGAGGTTAGACTGACAGGCGTTCTGGGCTGAGAATTATTGAACCAAAGGGCACAATATATTTGTACATGTGATAAATTAACACAATTAGTTGCAGCTTTGACATGTTTAATTTTCTGTATGTATTATAAGCATGGCTCCTAAAAAACCCTTCAACCTGgactttttttggttttataactccctgtaaaaaaacaacatttggtTGCATGTTTACAAAGTGGCTCCATTAAAttctgaatttctttttttatttgatatataGGAGAGATTTAGTTTT
>XM_039807243.1
CTGTAGGGACTCCCTCTTTATCGTGCTGCTGCCATTGCCATGCAGCGGTCCGTCAGTGTGCCAGCAGTCCCCGCAGAGCGCAGAGCGCAGAGCCGCGCCGAAGCACGCCGTCTGTCACAGAGAGGATCTCCGCACCTTTTCGGGATTTGAAAGACAACAAGAGTGGATAAACTAAGCGAACAAGGAGTCCACGCAGGTGAGGTGAGGACAAGGACGAGATCTTCATCTGCCCCATCTGTCCATCAACGAACCAAGTGCCTCGGTGCCGGCCACCCTCAGGTCACCTCAACCACGACGGGCGCCAAACAATAAAAGTCTTGACCCTGGCGTCTCTCAGACAGACTgcacaaaacaaatatttgaGGCCATTATATCTCATTTCTCAAGGCAGCCGTCACTGAAAAGATCAACAGTGAAGGGTGTTGttgggagaaagaaaaagagaagaaaacgtGTGGGAGGAAAAAGTAACCCTTTCAAAGTGCACCCCTGCCTGCTATTTCTGCTGCGGTGTGGGCAGGGAGCGTCTCTTTTGGGAGTGCTTCTGGCTGACAAAAAAATAGTCTTCCCTGTGCCCTGCCTGCCTATCCAAATGCCTGTGTAAATACTGGATAGAGATATCAATTTGTCTGGGCTCTAACATTGCCCAACAAAGAGACTGTAAGCTATCTATAGAAAACATTACAACAAACTTGGACTCTGTGGTCTCCTGAATTGCTACCTATCTATTACCCCTCAAGGAAGATCAGGAAGTAGAGCTGTCACTGTTTTCTACACTTAGAAACTTTTACAAACACAAACTAGGTTTGAAATTTTCACAAGGCGAACAACTGCTTTCTGGGCGACACCAGAAGCTGTCAGTCATTAAGGGGGCTGCAGTTTTGATGTCTCTCCCAGCTCAGTGAATCAATATGAAGCCCCTAACGCCAGCTGGATCCCCCTCTCCTCTGAGGCTCCTCAACAAGGGTCCAGACTACCTGCGCAGGCAGATAGATGGTGGAGGCCACGGCCGCTCAATCAGCGCTGTGGAGAGGCTTGAGGCGGACAAAGCCAAATATGTTAAGAGTCAGCAGGTGATCAACACCAAACAGGAACCTGTGCTGGTGCCCTGTGCTACCCCACCACCGCAGCCCCGGCGAGCTATATCCATCCCCGGTAGCCTGACGCCTCAACTTTCCCCACGCTATTCATCCAACACCCCCTTCTCTACACTCTCTGGCTCCTTCACCTCAAGAGATGAGAATGAAAACGATGACTCCAAGAAGGAGAACAGACGGACTTCTGTTGACGTTGAGGCGCATAACAGGAGCAATATGAAAAATGTCCTGCTTCCAAACCCCAGGACTCCTGGCATCAACGCCTTGGTAGCACCACACAGTGCCCCTGTACTCAGAAGGAGCACAGGCAAACGCATGCTGAGGCCGGACTCCCTCGTCATTTATAGGCAGAAGAAAGAGTGCAAGAGCCCCAGCAGCGCGGCAGCGGGAGAGAACGATAACACGGAGGTGAAGGGCTACAGTTTTGTCCGCCGCCTTTTCCAGGGCTCCATGAGGGAGAAGAGTAGCGGAGGTGAAGGCAGAATTCAGAAGATGGTGATCGGTGAAGAGAAAGCGCCATCACGGGATGGAGACTCCCGCATGTCTTGGACCAATGACAAAGACACTACGGACGGAGGACCAGGGAGCAGGAGGTCCAGTAAAACTGACCAAGAACGCAGCCCAGGGTCTATCCCCAGCCCTGGCTTTAGCTGTGTGCTTGAACAGACTAAGAATGGATTTACAAATGGTACTAGTGATGGTACTACCAATGGCAACCACTCAAATAACCATGATGATGAGAATGACCCATGGAAGCGTGCGTCACCCCCACCAGTACCCAGAAGGCATTTTGGGGAGTTGCGGCGCTCAAAGTCAGACCTGCGTCTGCGCTGCTCAGCGTTATCAGAGCAGGAGCATTTCTTTGACTTCTGCGGGCTGGATGTGGACATGATAGAGCGTCTGGGTCGagataatttcctctctggTGCCAGCTCCATAGACACACTCTCATTGGCCCTCCGCAGTGTAGGTGGGGACGGCTGCGGCGGCTCAGGGGATGGCTGCGGTGGCTCAGAGCCCAGCGAGTTCTCCCAGCACTCGGGAGACGGGCTGTTTCAGGAGGAGCTGGCTGAGCAGCTTCCCAATGGTGTGTCAATCATTGAGAGGAACGCTCGTGTCATCAAGTGGCTTTACGGGTGTAAGAACGCTGCTCGAGAGGGACCCAAAGAGTCTACTGTTTAATATAGGGACGAGGAACCATGCGCTGTGGAGTGCTAAGTGTCTGAGGTGTTCTTTCTAAGGTGACAAGGGTTCCCTGGTTTCTTTCCTGATGCGTACATCCTTACACAGAGAGAAGTAACTATTCAGTGAAATCACCTGGTGGAATATATGGTTCTGCAGACCTTTACCCTTTGGCGTTGAGATGCACTACAAACCAAAAATCAAAGCATTGAATCATGAATGAATTTCACTTGAATCTCAAAAACAACATTCagtatgttgtatgtgtgccAGTGTGATTAGCTAGCAGCATTGACGCAATGCATCATAGAAGGAAAAAATAGGACTTGTTTCTCCTTTTGAGATGCAAGCAGCAATGCAAGTCAAAGCAGATAGAAAAATttgatttcaatttcaatttcaaatgaatGTCACTGACAGTTGACTTTTGTTTCAGACGCAAATGTCTGCACGTAGGGTTAGCACTCCATGGCACATGATTACCTTTAGTCCCTAGGTCTCCCTGACTCCAAAGAGACTGTTTCTTTAACTGCTACTAGTTATCTCTGGTCAAAttgatatattatatttatggaTCTCAAGGACGTATTGTGTGGGTATAGACAGACCTTACTGATGAATGGAACTATTTCTCCGAGCAAAATGTTTcggtatctgtgtgtatgtgtgtggctgtgtgtggagTGGACGTTGCTGTCCTCTCCATTTGTAGCTTCTTTTCAGATATTGACTGAACTGATCTGAAATCAGCCCCTGTGACCCCTCACAAGGcacatatgtgtatgtttgtcatGACGCAGTGGACACAGTTTAGTGTCCTTGACACCAACACTCTCCTGTAATGACTAAATTAAAATGGAAAACCACTAAGCTATGTTTTTTCTaaactgtgtgagtgtgaagtGAACCATGAGTACCTCATTCGGATCTGTCCCAGTTTAGTttgtgtgttgctttttttttttttttactccttaAACGCAGGCGTTGGAACAAACATGCGAGGCACCCCTGTGGGGTTGTTAATGCACTGAactgcacagagagagaggaaatgaaagataGACATATAGCGTTGACTCTTTACAGAGATTCATCTCATATAACGTTAAACACTGAGCTGGATTCAAAGGACCACCCGCATTATGGTAGACAAAGAGCCATGCATGGCCAGTAATTTCCATCATTTTCATCTCATTTTCTAAATTCTAAAGATGACTTTCACACAGTATAAACACTGTCCAATAATCACTTGCGACACACTCATTGATTACCACAGCAAATCCTTCATGCATGTTCAGTGCTCACAGCTGTGTAAGCTATATGGTAGCACGATGAGCAAGAGGGAAAGATTCCTGTCAAGCAAATATAAGCACAATGAGAATTTAAATCTCACaaaagaagtttaaaaaaatgaagacaatttcataaaaaaataatctattcaCCTCCAAAAGTAAAGGAGCTCAAGTTGTCAAACCTTTACTGCGAAATGTTTTAGGATGTCACTTTCACCATCTGGCAGTTTACGGACGTTCAACCTTCCCAGCTGGCTCAGTCAGCCCGTTTCCCATCAAAACAAGCAGTGGAGGCTGAAGCCGCCCTCCTTTCTCTGATAACCAGAGATCCTACCTCACTTCATCCATCCTTCAGTGATTCTCACTTTATCTCCATGAAAGGTCAATCCATTGCTTGGCCTGTAGGATTCCACTGAAATATGAACTGGGGGTGTGCCGAGGTATGCAGAGGTTAGACTGACAGGCGTTCTGGGCTGAGAATTATTGAACCAAAGGGCACAATATATTTGTACATGTGATAAATTAACACAATTAGTTGCAGCTTTGACATGTTTAATTTTCTGTATGTATTATAAGCATGGCTCCTAAAAAACCCTTCAACCTGgactttttttggttttataactccctgtaaaaaaacaacatttggtTGCATGTTTACAAAGTGGCTCCATTAAAttctgaatttctttttttatttgatatataGGAGAGATTTAGTTTTTATTCCAAAGAGGATTGTGTATGATGTACAcagcaaataaacacaaagaaTGAAA

Function

NR:

description
PREDICTED: protein FAM110D

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102340 False 1033 lncRNA 0.39 1 27884377 27885409
XM_039807243.1 True 4356 mRNA 0.46 2 27867444 27885464

Neighbor

gene id symbol gene type direction distance location
pnrc2 pnrc2,LOC100697533,LOC104941893,LOC101487357 coding upstream 511611 27351851 ~ 27355833 (+)
LOC120561567 mycbp coding upstream 562438 27303310 ~ 27305006 (+)
utp11 utp11 coding upstream 852342 27013093 ~ 27015102 (+)
rspo1 rspo1 coding upstream 912160 26943236 ~ 26955284 (+)
dnali1 dnali1 coding upstream 977609 26886568 ~ 26889835 (+)
si:dkeyp-97a10.3 NA coding downstream 162179 28047643 ~ 28059160 (+)
LOC120562747 LOC103369304,LOC107379318,LOC104956022,LOC100707205,LOC107082966 coding downstream 188726 28074190 ~ 28077263 (+)
etfb etfb coding downstream 377403 28262867 ~ 28272836 (+)
vsig10l NA coding downstream 388609 28274073 ~ 28279197 (+)
LOC120562954 LOC103375369 coding downstream 462146 28347610 ~ 28354162 (+)
G76503 NA non-coding upstream 3709 27863449 ~ 27863735 (+)
G76470 LOC104924712,LOC103367060 non-coding upstream 57402 27809798 ~ 27810042 (+)
G76468 LOC103367060,LOC103388013 non-coding upstream 61609 27805618 ~ 27805835 (+)
G76467 NA non-coding upstream 63483 27803762 ~ 27803961 (+)
G76466 NA non-coding upstream 72571 27794552 ~ 27794873 (+)
G76510 NA non-coding downstream 49331 27934795 ~ 27938662 (+)
G76579 NA non-coding downstream 348148 28233612 ~ 28236339 (+)
G76608 NA non-coding downstream 406536 28292000 ~ 28292560 (+)
LOC120562953 NA non-coding downstream 446455 28331919 ~ 28346792 (+)
LOC120563095 NA non-coding downstream 551751 28437215 ~ 28438360 (+)
G76417 NA other upstream 578987 27284538 ~ 27288457 (+)
G76355 snip1 other upstream 980898 26883450 ~ 26886546 (+)
G76315 NA other upstream 1052053 26808118 ~ 26815391 (+)
LOC120562432 LOC101064911,LOC106524684,LOC104919574,LOC106098620,LOC102206486,LOC108235477,LOC102229209,LOC108166993 other upstream 1219829 26645384 ~ 26647615 (+)
G76192 NA other upstream 1724817 26139901 ~ 26142627 (+)
G76511 NA other downstream 63419 27948883 ~ 27952580 (+)
ago1 ago1,LOC102230823,LOC103367053,LOC107379324,LOC103388087,LOC107082980,LOC101466039,LOC104959479 other downstream 77226 27962690 ~ 27983714 (+)
LOC120561771 LOC103367052,LOC101466533,LOC107379323,LOC100706402,LOC103139281 other downstream 98589 27984053 ~ 28027526 (+)
G76581 LOC101157563,LOC103369309 other downstream 356319 28241783 ~ 28245161 (+)
lim2.5 lim2,LOC106582670,LOC106605161,LOC107379310,LOC100699404,LOC102215845,LOC103139272 other downstream 397812 28283276 ~ 28287777 (+)

Expression


Co-expression Network