G77028 (LOC104942601)


Basic Information

Item Value
gene id G77028
gene name LOC104942601
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 29404008 ~ 29412413 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU103032
CACTGAGGAAGGACCACATGTTGGTTACCTGAGCACCAGTTGACAGTGACAGTCTTCCGGAAAGCTCCACGCGGCTGCAGACTCCTTGTGGCGACTTACAGCGTGAACAACAAACCCGCACAGCTGCTTCTCCAACACCTCCACCACCACCGGGGCGTTTCCCTTCTTCCCCTGGCCCTCCATCACCTGCCGGATGCAGTCGCGAGGCACCGGCTGCGGTTTAGTGCTGTACGACACCACCAGGTTGATGTTGTTTACCTGCAGCACCTCGAACCAGTTCTGTCCCGCCACGTGGTGAAAGTGCTCCCCTGCTCGCCAGTTCCGGAGGTGCTTGGCGTCTAATTTTGCTTGCTCCGGGAAGGCAGCGGTACAGGACTCGATGGTTGTCTTCATCCTGGACTCAACTTCTTCAATTTTGCTGCTCCACTCTAGGATTTTGTCGTCTTCTTCATCTTGGCCCTGGGTTAAGGCAcagtggcccagcagagcaatCAGGCCCAAACAGAAGAGCTCCTTCATCCGGACACAGAAATCTTCAAGGAGACGACGGTTCCTCGCTACCTTTCGACCACCTCTAAAACTGACTCTCCAAAGCTGTTTGTTCCCATCAGAGCATCATACAGCACAAATAGGTTCTTCTCTCCTCCAGTTTTGGCAAAGTGCTCCACAAAAAGTCTGGTCTTGACCTCCCTGAACTGCTGTTTTGCCTCCAAGATGTCCATATACTTCCGAAACTGGTTCCTAATGTTCTCCTCCACTGAGAAGTACTGGGAATCCAGTCTCCCCTTCTTGATCTCGCTGTCAATGTCTTCCAGTTGCGTGGAGAGCACGTCAAGCTTGTTCCTCACCGTCAGGAACTGCTCTTTAACGTAGAAGACCTCTTTGCTGTGGACGTTGTCTAAGGCCAGGCGGAGGACCGGGGCGGCGGCCTCACACAGGGGGAAGAGCTCGCCCACAGCGCTGGCCAACACCTCGGCCCCCTTCTCAAACATATCCATCACTGCCTCGATGGCCTCCTTCTTCTGGGCCACAACCCTCTCCAATGAAGTGCTCATGTTCTGAGACACAGAGGGACAAAATCTGGAGTCAGATATAAATAAACCTTCTGGAGAAAGAAGTGAAGTGGCAAAAGGGATCAAAGACTGTATTCTGTTTAttcatgacaaatacatctcAGATGGTTTCATTTGAATAATGAATACATCTTCTGGCCTCTACTATTTCACAAGTAAAATGCAAAGTTTAgataaaaggggaaaaaagaatACGATATTTGTGTTTCAGAGCAACTTAACATAGCTAATTACTAAAGAGAATAGAAGCTTAATGCTTTTCAAAGAATCTTGAcctctgtttcctttttttttttttttcttcataaaacTCACTAGTATTAACATGAATAAGCTTTCTCCTTTAAGGTTATAGAATATATTGGTGAACCGTTATCTGGATATTccagagctgaaacaattagtcgatCAATCGGCAGACAATTGATCTGcatctattttgataattgaagaatctttgagtcatttttcaagcagaaATGCCAAAACACCTCTGCTTGCTGCCTCTCCAATGTG
>TU103033
gtttttatgttgtttacATCAGAGTTAAACTTTAATACAGTTCCAGGGGTTACAACAAAGTTACAATTTCTACACTGTTCACCTATGGATGTAAACATCCTTAAAATAAAGGAATAGGTCAACCTTTCAAGGACCTTTCTTTTAGAGAGTTAAATGACAAGATTGATACCATTAATATCTGTTAAGTGCAGCGCTTGAGTCAGGAaacgattagcttagcttagcataaagactgcaagcagtgggaaacagctagcctagctctaTCCAGTTCAGAAATACACCTGCCAACACAGCTTAAGCTCATCAATAGTTTGTGCAATTTGCTTTCTTATTGAGAGGAAGATGAGAAAACTCTCATatctgtatgctaaatatgaagctatatactgtactaccagcagccggttagcttagcttggcATAAAGACTGTAAATGGGGCAAAATACAGCtagtctggctctgtccaaatgtaataaaaaaatcagtcCATCAGCACCTCAATTGTTCttaaatgtttaatattttcTGAAATGAATGTGTAAAAAGGACAATTAGAGTTTTTTTGAGGGATTtgtgccagactatttcttgtctggcaacaaaataaacaaactaaATGCATCATGATGATATGCTGAGCTTTTAGAAGTGCTGGTAGGTGTATTTGTTATctttagacagagccaggctatcAATCAATAATCTAATTGATAATTTTGGCTTAAAATTGGTTATATGGACACCTTTTATCCCCATAACAACCTCATCTTCCCACCAGCAGCTCTTTTCCACTGCAGACACAGAAACCTCTCAGATGATTCAACACAGTGCACTTTTCCTGCACTGCGTTGTATATTACAGACAGTACTTGATGGATTCTGACAGGCTGGATTTACAAGAGGCTAAAGACCCTCCAGATCCACTGAGATATGAAATGATGGCCGTCTCTACCCGCTCTGCACCTACACTGAGCATTATGACTGATACCATCCTGCTAAGCCAAGCACTTTGCTGCTCGTCTACAGAATATTAGCTCAGCCAAAGGTTATTCATAGACTATCAAACCAGAGCTGCGGTCAGGAAATGCTGACTTATGTGTAAATATCAATTAAATTAGTTGGAGTGCCTGTTGCTGAGGGTGCACTGCCTGGTTTTAATGGGCACAGACGTGAACAGTGCTGCGTAAATCACATTTGTACAAGAAAAGAGAGGCAGACATTAGATTATACTTGTTTACACTTCCATTAACTATTTGTACTTGGTCATTAATTGTCACAAAGCATAAAGAGTATGATGAACATTGATCATgcattgattttatttctttgaaGAAAGAAGCTGTTGTGGACGTGACAGTTAATAAAAGTAGAATGCTTGATAGATTTCTCTTCCCTGGGAAAGAACTTTTGAGCACAGGGAGTGAAATGATTTAAAGTTTCTGGCAAAAGTCACAGTGGTTTGTTTGAAATGACCAAAATGGAAGTGTGAGTGTTTAGTATGAGCACGATATCATAACAAACTAGAAGGACATTTGGAGAGACCAGACCTCCGCTAAGGCATGCcttatctcacaatgttaatgcagtgtgaatatTCCTAGTCAGGGAActaaacataacctccttggcggagGTAACTAAGAAAAATGCCTCACACATAGATAGAAAAGCATAcgtaagtcataaaaaaatgcaTCAAATTTGGCTGGGAAATATAAAACAACGCAGCGGTTTTATCACCGAAcgttacaaaaataaaatgcacaaatGAAGAATCTTACAGACGAAATCACTGCTAATCCATTACATAATTATAGGCACAGCACTTGGTAAGCACTGAGGTTTGGTTGTTTTGGTTCGGGGGGTTTGAATGTGTTTAACACACAAGGCACATTGTCGCATCTCCAGTGCCAAACTCCAAGCTTCTTGTTTTTCACGCCTGAAAAAGTGGCCTCTGTCCCCCCGTCAGAGTTATGTAGGCCAGCCTGCTGAGCAGAGACAAAATGGGAGCACAGCTCGGTAGATGCAGCCTCAGCAAAACCCTGTCTTTAGAGCTGTAGGTGCAGAAGCCATTTCTCATGGGAGACTGGATTAGTACTGTATGCAGCTGAGATAAAAGCACAAGACATGTCCCATTATACAGTGTTAGTCTTATAAGGTGTCTTATAGTTATAAACAAAGTGGTTAGTAACTCatacattacaaataaaaagataCACTTACGCAAGCAGTTAATATTGAAAGAGCTACaacataaaatacatttacatcaaATGTCTGTAAATCCAATATCTACATGTATACCAAGTTCACACAACCCAGAAAGCTAATAAAAGTGCATTTgtgataaaataatttaaacaaacgatctgaAATACAATGTTTCTGATAGGGATGCACCAATCTGACTTTTTCTCGATATGGAAATCCAAGGTATTGACCAGTGCTGCTTTTCCCCCCCCGAATTTAAAATCATTATACCTCACTGCATGGATCTGATGGTAGCCATTCTTGCATGTACAGTTCAAGTAACGTGAGGATAtaactgtattaaaaaaaaaatgatataagCTTATAAAATACATTGTAATGTTCAAGATTAAAGCAGTGGctcccaacctttttggcttgtCTTGTGGCCCTTTACAGACAAGCAGTGTCTATGGCCCTGGGTCATGTTTTAGATGTCTGTAGTTGTTAGCTGTTCAACCAAAGAGACTCAAAGAGGTACAATTATccagtaaagaaataaaggtTTTGAAGAAACCACTATTACAAATTTTTGTAGCAAAACTGTATTTTCTTCACTCCTTTCCCAATAAATGTCTCAtgacccctcagatttatctgGAGACTCTTCAAAAGGGGGCCAGACTCCTAAATTTGGAACCACTGGACCTGAAATGACCTCACTTTATATAAAAATTTAGTTAAAGCTCTGCCtcaaacagctacaacagtaaaatgcttTGCATGTATTCAATTGTAACAATCTAATAATGTCATATATAATATTTGCAGACATCGGGTCAGTTTAAAATGTTGCTGAtataatacttctgtactttacGAAGATTTTGaaggcaggacttttacttgtaatggactATTCTTACATTGTTGTATTGACACGTTTAGTAAGTAAAGGATCAGATTATTTCTTCACTGACTGTACATTACTTCTTCTTAACTATAAGTGGAATCTACGAGTTACGATGTATGTAGTTGCATAAGCTCAGCCCAAAAAATGAAGGCGCAGAACAGAAAGCGAGTGCTGTAAGAATGCTATTTGGGTGACTAGAGTGAAAACTGCTGACAAGTATTGATGAATAAGGTAACATTGTGCACATGGGATTGTTGTGGTGCTGAACATTCACCCATCAAGCCTATTGGATTGGTGCATCCCCAGTTTCTGAGgttcattattttcatttaagGTAAACTTACATACTGATATTCTCTGGACAAGCAAGATACATCTACAGTATCTCAATTGAAATACACCCCTCTGCGGTAACATCCTAAAATCTGAAACCTGTATCACCTTTACTCCGagtgcacacacactgccacaTTCTTGTGTCTCTCCCAGTAGTGACAGTCTTCCGGAAAGCTCCACGCGGCTGCAGACTCCTTGTGGCGACTTACAGCGTGAACAACAAACCCGCACAGCTGCTTCTCCAACACCTCCACCACCACCGGGGCGTTTCCCTTCTTCCCCTGGCCCTCCATCACCTGCCGGATGCAGTCGCGAGGCACCGGCTGCGGTTTAGTGCTGTACGACACCACCAGGTTGATGTTGTTTACCTGCAGCACCTCGAACCAGTTCTGTCCCGCCACGTGGTGAAAGTGCTCCCCTGCTCGCCAGTTCCGGAGGTGCTTGGCGTCTAATTTTGCTTGCTCCGGGAAGGCAGCGGTACAGGACTCGATGGTTGTCTTCATCCTGGACTCAACTTCTTCAATTTTGCTGCTCCACTCTAGGATTTTGTCGTCTTCTTCATCTTGGCCCTGGGTTAAGGCAcagtggcccagcagagcaatCAGGCCCAAACAGAAGAGCTCCTTCATCCGGACACAGAAATCTTCAAGGAGACGACGGTTCCTCGCTACATACCTGCAAAACAGAGGAAGGAGTTTATCTGGTGCTCCAATCCAGAGAAACTGCAGTGATAATGGTGTCAAAAACCTGCACAGAAGCAATAAATGAAAGCCGCAATGAATCCAGAAACGTAAatgtgatgaaatgtacagtacaggccaaaagtttggacacaccttctcattcaatgcgtttcctttttattttcatgactatttacattgtagattctcactgaaggcatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103032 False 1589 TUCP 0.47 4 29404008 29412413
TU103033 True 4347 lncRNA 0.40 2 29406467 29410936

Neighbor

gene id symbol gene type direction distance location
LOC120562990 NA coding upstream 42883 29355633 ~ 29361125 (+)
LOC120562792 NA coding upstream 48466 29352141 ~ 29355542 (+)
LOC120562836 NA coding upstream 55185 29339254 ~ 29348823 (+)
LOC120562877 LOC103362365,LOC104932167,LOC104967986 coding upstream 65034 29337456 ~ 29338974 (+)
LOC120562725 NA coding upstream 235077 29163561 ~ 29168931 (+)
LOC120562942 NA coding downstream 330596 29743009 ~ 29745181 (+)
ntrk1 NA coding downstream 367766 29780179 ~ 29811789 (+)
pbx2 LOC103356852,LOC108245987,LOC101487230,LOC102193020,LOC100704063 coding downstream 713513 30125926 ~ 30133536 (+)
LOC120561633 NA coding downstream 723868 30136281 ~ 30137569 (+)
tap1 tap1 coding downstream 757601 30170014 ~ 30182142 (+)
G77014 NA non-coding upstream 38578 29363233 ~ 29365430 (+)
G77004 NA non-coding upstream 89383 29314099 ~ 29314625 (+)
G76995 NA non-coding upstream 101873 29296958 ~ 29302135 (+)
G76969 NA non-coding upstream 276796 29126955 ~ 29127212 (+)
G76935 NA non-coding upstream 318521 29015876 ~ 29085487 (+)
LOC120562102 NA non-coding downstream 846 29413259 ~ 29424203 (+)
G77033 NA non-coding downstream 20747 29433160 ~ 29439174 (+)
G77097 NA non-coding downstream 52199 29464612 ~ 29465552 (+)
G77114 bola1 non-coding downstream 170344 29582757 ~ 29585000 (+)
G77172 NA non-coding downstream 400518 29812931 ~ 29813541 (+)
LOC120562177 LOC104942602,LOC104934039,LOC103362363 other upstream 13955 29384135 ~ 29390053 (+)
G77009 ubqln4 other upstream 73750 29328789 ~ 29330258 (+)
mex3a mex3a other upstream 115460 29276147 ~ 29288548 (+)
pear1 LOC104932170 other upstream 159916 29179830 ~ 29244092 (+)
LOC120562342 NA other upstream 568640 28800650 ~ 28835368 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other downstream 661524 30073937 ~ 30109545 (+)
G77239 NA other downstream 711289 30123702 ~ 30124638 (+)
LOC120562443 NA other downstream 939082 30351495 ~ 30360588 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other downstream 1274925 30687338 ~ 30731609 (+)
G77447 NA other downstream 1722416 31134829 ~ 31136146 (+)

Expression


Co-expression Network