rgl2 (LOC101463702,LOC100700084,LOC102303531,LOC102796597)


Basic Information

Item Value
gene id rgl2
gene name LOC101463702,LOC100700084,LOC102303531,LOC102796597
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 30073937 ~ 30109545 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU103292
AGTTGGTCACAACCCCTGGAAGTTGCACACTATTTTACAATTATCAAACTGACATAACACATCCTGTCACTCCCTTTGCAGAACGGCTACATCAACTTTGACAAAAGGAGAAGGGAGTTTGAGGTTTTAGCTCAAATCCGGCTCCTGCGTCTTCTTGCAAAAACTGTGTTTTCACCGCTGACGAGGCCTTCATACAGTGGTATCAGAGTGTACCGACACTAACAGAGGAGGAAAGTTACAGACTGTCCAATGAAATTGAAGCACCTGGTGAGCCGAGCCCCCGCGGCCATCCTCCAACAGTCATCATCACACAGTGCCCAGACCTGAGTACGTCTCGGACCAGCCTGACTGGTGACAGTGACAGCCTCTTTGACTTCCCCTCCCCTGTCAATAATCTGCTCTCAAAACTCACAAAGCATATGAAATCTCCGTCTGTGTCCTGTCTGGATGTTGACACGTCTCCTTCAACCACTGACTCCACCCCTGCCACGTTGACTCCATCCACTCCCACAAAATCACACCGCCGATCAGTCTCCTGCGGCAACAACCCCCCTAATAACATCCAAGGGTCGGGGCCCGACATGCGAATCATCAGGATACGGATGGACCTGCACGATGGAAACATGTACCGAAGCATACTGGTTACGAGCAATGACAAGACCCCCACTGTGATCAGCTCTGCCTTAGAAAAGCACAATCAGGACCCCAAACAGACGTTCAAATTACGAGCTGATCCAACTTCAGCCTGAAGGAAAAGAACTGGTCATCCCTGCTACAGGAAACGTCTTCTATGCCATGACATCATCTAGTGTTGACTTCCTGTTGAGGAGGAAAGGCGGGAACACTCCTCTGAGCTCACAGCCGATCAACATGGAGACGAGGGCCACTTTTCCTCGAATCAAGGCCAAGGGGAGGAGACTGGTCCGGACACTATTTTGACATCAgattttcctgaacccaacttTGTCCACAGTGACGGCTTTTTCACCTCACAAACAGTAAATGTGGCCTTCTACACATGCCTTTCTCCCTACAAAGCTTGTTCCACTAAAACACCAAAACCAAGTCTTTATCAACGACTCCGGAGCAGGTTTTGTCAAACTTTTCATACCTGCAGCTGCCCTGCTGAGTTCACTAGAGCCGTCTGCTACTGAAGAACAGTGTCAGTTTTCCTCTTTTCCTAAACAGTATGTGTTACTAATTTACACCTCGAGGTAAAGCAATGAAAGCCTTTAACTGAGTGCTTTTGGTGCTGTCTCTCGAGTCCCAGTCAGGTATCACTTAATGCATTTTCAACTCAGTGAATAAGATCCATTTCATTGCTTATAGCCACCAGGAAATCCCTTGTTGCTGTGTGCCTCAGTCGTGAGCGATGCTTCCAAATGTAAATAAGAGGATTTGATTGGTCAGAACCTCTGTGATCACCTGAGATGCCGTTGAAGGATTAAGGACAGTGTTTTCTTTGGGAAGATGCATAATAAATTCGAAATATACAGAGCCTGTCACATGTGGTTCTGGTGAACAGCACACATGAGGAAGACCCAAAGATACAGTGCAAGTGCATCCATGTAGCAAAACACTGGAGCTTGAGACAtatatatgttttgtatgtatttatatattttgtacgTCTGTATGATGTCAACATTGTGTTTACACTGGCGAGAAGCTCTAGGTCCTAGAGGCCAAATTGTCTAATTCATCaaggcaaaaaatgcatcaaatACCTGCAAGATTTCCACTTTAAACAGGCCAGGACATGTCCACAGACAGCGATTCATTAAATTACTATTCATATTTTGAAAAGGGCTGCTTGTATTGACTAACCCAAAAGGAATGATCAACCCTGTTGTAGCCCCGGAAATTGACTTCATGGTTCATTCTCCCAGTTTGTTTTGTAGTTTGAAACCCTGTATCCAGCAgcagctgtttttttatttattttttttatttttagcaacaacaaaaaagggtaAAGCTACCTTGTGCTACCTGCCCAACAGCAACCAGCAAACAtacaaagttagcgactagctgttgaaaaaaaaagtcaaacatctatctgctaaagagccagataatTTCCTCAGAAGTTGCTAAAGACCAAACTAGCCCTAAAAGGAGAGTGATATGCACTTATTTTATCAGCTGGACCAAGATACAACTCCAGATAAATACTTCCTCTGCAGTTGTTTGTGTATTTAGGCAGCTGTTCACTAACACCTTAGCTGTTGAAACTTTATAGGCTGTCATACAGGTCGTTTTAAAATTCTTCTGACCCCTAGTGGCCAAAGAAAATGATtattgacttaaaaaaaaaagagacttaaaaaaaaaaaatgcagcactTTTAAAGCTTGTGGCTTTGCTTCAGTTTATCACTGCAGTACCAAAACCATAAGGAAAACCGTAAggaaaatccaaaaaaaaataacaaaacaacttTATTAAGCCTAAGGTTTGAACTTATAAGCTAAACTTAATTTATGCAGATTTTCACACAGCTCAGCAGGATACATCTTCACTGCTGTTTACGTACAGCAAAAAAAGCCTCAGCTCCAATTTCATGTTATGAATGAACATGTTAACTTCCATGTTGGTTTAAAACACACAacctctttgaaaaaaaaaaaaaagtcttgtgACCTGTAGTTGTACTCAGTGCTCAGTGCTGGTGAGGCCACCTTACTGGCTGAGGCACGAGCATAGCGGGGACCAGGGAGAGGATTCTGGGTAATAATAGATGACGTGTGCTAGCGTTATGCTATGCTACTGATTGTTTTAGTGCCTTTCTCTACAGGATGCTCGTCTTTCCCGTGTTTGCATTAGAATGTATACAGTGTACGTGGAGGAAATGCAGTCACCTCCAGTGCTGTGTAGTCTCACATCAAAGCTGTTTATGCACTACACACAGGATGTCCTATTTTTGTGGTAATAAATTTACTTTTATATGAATTTCATTGCTTTTGACTGATGTGCTGTAACATATTCCACTTTCAATACAGACAGCTATTTTCCATGCTGCTGAGTATCCTATACACATAATTAAAGCTGTCTGTATTTGTCAAATACacacatttctatttttttattattatcatggATCAGGTAAACAAAGCAAGCTGAATATACATCAGTGACAAAAATACacctttgtttttattatttttattctgaTTCAAGATAGCCAGCATCTTCATCTTCAAGCAAAATCAAGGAATGTATGTGGAAATGTGATACAACTATAACACATAACAAAAGAAGAGCTGgatatgtcagaaaaagcacaTTAGAAACACTCATACCAACCCAGCTAATAACACAAGCATTCATGAAACAAAGTATTAAAGCATTCCTCCCAC
>XM_039805562.1
aggagaggagaggagagggagtttGCAGCTTGGCCAAAGTGCGCTATCAGCTGCTGAAGGCTGGACAGACGAGCGGTGCGTGGATACtgatagagaggagagagggtgggggcGCGAGGCGGTGGACGGAGACTCTCTCGTCGTTGTCGTCGGTGACGGTCGTACAGATGGGCGCGACTCTCCTCAGCTGAGCCGGCCACCGATCCAGCAGCACCAGAGGCCACCCAATGCTGCCTGAATCCAGCTGACCACAGTTGGACAACCCACATCCTGCGAATGCCACTTGGCTATAACTGGCACCATGCTCCCCCGTAACATGCGAACAGGAGGTTATGACCTGCCGGGGGTGGAGTCAAGCAACGTGCCTCTCATTGGCTACCGGCCCTTACCACCTGACAGCGGCACCCCGGGCAACCAATCAAGGAGGGGGAGCGGCAGCGATGAATTGGAAACTTCACAGGCAGAGCCCTCACCAATGAAAACCATCTGGTACTGTCCTGTGGATCTGTCCACTgtggtggaggaagaggaggatggggTGATCTACACAGTGGTGGTCAAACAGCAGCATGGTGCCCCCAATAGTGTGACGTCAGCAACTTCTCGCTCTCAGTATGTAAAAGCAGGgacagaagagaagctggtgCGCCACCTCTTCAATTCCTTTTTTCCGGGAGACTCCTCCTTTATCACCATCTTCCTCTCCACCTATCGATCCTTCACCTCCACAGGGAGAGTGCTGGACATCCTGTCTGACAGATTGGAGAACCCGCCTGGGGACAGCGGGACGAGCCAGACGAGACAATCTTTCAACAAAGCGGTGTGTACTGTGTTTAGCACGTGGCTCTCTGAGTATCCTGAAGACTTTAAGAGTTTGGGGGAGCCCTCTCGCCTGCTGCGCCTGgctcccctcctcccccaggACTCCTCGTCTGCAGCCGACCTCCGCGCTCGCCTCCTCAGCATAGCCGAGGAGCTCAGCGAGAAAGCCCTGCTCCCTGACGCCCATAAAGATCAGAGCGGTTTCACCAGCCCTCCTCCTGACGCCTCCAAGTTTGAACCCACCAGCGTCCTTGGATTCCCTGCAGCGCTCATCGCTGAGCAGCTCACCAAAATAGAGACAGAGCTGTTTGTCCGTCTGGTCCCGTACCACTGCCTCGGCTCACTGTGGTCGCAGAGAGACAAGAAAGGGAGGGAAGGCGTTTGTTGGTCCGTCCGGGCCACCATACGTCAGTTCAACAAGTTGGCCAATGCAGTTTTAGCATCCTGCCTTTGGCCTACGAAACTGCGCAGCCAGCAGAGAGCCCGACTTCTGGAGAAATGGATCAGCGTGGCAGAGGAATGTCGAGCCAGGAAGAACTTCTCCTCGCTGTATGCCATCGTGTCGGCCCTGCAGAGTAATCCCATCCACCGGCTAAGGAAGACGTGGCATGACACTGACAGGGAGGCAGTGAGGAGATACGAGGAACTGTCAGAAATATTCTCAGACAAGGACAACTACTCACAAAGCAGAGAACTCCTAAAGGAGGAGGGCACATCAAAGTTCGCCAACATTGACCACAGGCTCAACAACAAACATATTAATAGGtccAACGCCCAGGGCACTGTGCCACCTGTTGCACACTATTTTACAATTATCAAACTGACATAACACATCCTGTCACTCCCTTTGCAGAACGGCTACATCAACTTTGACAAAAGGAGAAGGGAGTTTGAGGTTTTAGCTCAAATCCGGCTCCCGTCTTCTTGCAAAAACTGTGTTTTCACCGCTGACGAGGCCTTCATACAGTGGTATCAGAGTGTACCGACACTAACAGAGGAGGAAAGTTACAGACTGTCCAATGAAATTGAAGCACCTGGTGAGCCGAGCCCCCGCGGCCATCCTCCAACAGTCATCATCACACAGTGCCCAGACCTGAGTACGTCTCGGACCAGCCTGACTGGTGACAGTGACAGCCTCTTTGACTTCCCCTCCCCTGTCAATAATCTGCTCTCAAAACTCACAAAGCATATGAAATCTCCGTCTGTGTCCTGTCTGGATGTTGACACGTCTCCTTCAACCACTGACTCCACCCCTGCCACGTTGACTCCATCCACTCCCACAAAATCACACCGCCGATCAGTCTCCTGCGGCAACAACCCCCCTAATAACATCCAAGGGTCGGGGCCCGACATGCGAATCATCAGGATACGGATGGACCTGCACGATGGAAACATGTACCGAAGCATACTGGTTACGAGCAATGACAAGACCCCCACTGTGATCAGCTCTGCCTTAGAAAAGCACAATCAGGACCCCAAACAGACGTCAAATTACGAGCTGATCCAACTTCAGCCTGAAGGAAAAGAACTGGTCATCCCTGCTACAGGAAACGTCTTCTATGCCATGACATCATCTAGTGTTGACTTCCTGTTGAGGAGGAAAGGCGGGAACACTCCTCTGAGCTCACAGCCGATCAACATGGAGACGAGGGCCACTTTTCCTCGAATCAAGGCCAAGGGGAGGAGACTGGTCCGGACACTATTTTGACATCAgattttcctgaacccaacttTGTCCACAGTGACGGCTTTTTCACCTCACAAACAGTAAATGTGGCCTTCTACACATGCCTTTCTCCCTACAAAGCTTGTTCCACTAAAACACCAAAACCAAGTCTTTATCAACGACTCCGGAGCAGGTTTTGTCAAACTTTTCATACCTGCAGCTGCCCTGCTGAGTTCACTAGAGCCGTCTGCTACTGAAGAACAGTGTCAGTTTTCCTCTTTTCCTAAACAGTATGTGTTACTAATTTACACCTCGAGGTAAAGCAATGAAAGCCTTTAACTGAGTGCTTTTGGTGCTGTCTCTCGAGTCCCAGTCAGGTATCACTTAATGCATTTTCAACTCAGTGAATAAGATCCATTTCATTGCTTATAGCCACCAGGAAATCCCTTGTTGCTGTGTGCCTCAGTCGTGAGCGATGCTTCCAAATGTAAATAAGAGGATTTGATTGGTCAGAACCTCTGTGATCACCTGAGATGCCGTTGAAGGATTAAGGACAGTGTTTTCTTTGGGAAGATGCATAATAAATTCGAAATATACAGAGCCTGTCACATGTGGTTCTGGTGAACAGCACACATGAGGAAGACCCAAAGATACAGTGCAAGTGCATCCATGTAGCAAAACACTGGAGCTTGAGACAtatatatgttttgtatgtatttatatattttgtacgTCTGTATGATGTCAACATTGTGTTTACACTGGCGAGAAGCTCTAGGTCCTAGAGGCCAAATTGTCTAATTCATCaaggcaaaaaatgcatcaaatACCTGCAAGATTTCCACTTTAAACAGGCCAGGACATGTCCACAGACAGCGATTCATTAAATTACTATTCATATTTTGAAAAGGGCTGCTTGTATTGACTAACCCAAAAGGAATGATCAACCCTGTTGTAGCCCCGGAAATTGACTTCATGGTTCATTCTCCCAGTTTGTTTTGTAGTTTGAAACCCTGTATCCAGCAgcagctgtttttttatttattttttttatttttagcaacaacaaaaaagggtaAAGCTACCTTGTGCTACCTGCCCAACAGCAACCAGCAAACAtacaaagttagcgactagctgttgaaaaaaaaagtcaaacatctatctgctaaagagccagataatTTCCTCAGAAGTTGCTAAAGACCAAACTAGCCCTAAAAGGAGAGTGATATGCACTTATTTTATCAGCTGGACCAAGATACAACTCCAGATAAATACTTCCTCTGCAGTTGTTTGTGTATTTAGGCAGCTGTTCACTAACACCTTAGCTGTTGAAACTTTATAGGCTGTCATACAGGTCGTTTTAAAATTCTTCTGACCCCTAGTGGCCAAAGAAAATGATtattgacttaaaaaaaaaagagacttaaaaaaaaaaaatgcagcactTTTAAAGCTTGTGGCTTTGCTTCAGTTTATCACTGCAGTACCAAAACCATAAGGAAAACCGTAAggaaaatccaaaaaaaaataacaaaacaacttTATTAAGCCTAAGGTTTGAACTTATAAGCTAAACTTAATTTATGCAGATTTTCACACAGCTCAGCAGGATACATCTTCACTGCTGTTTACGTACAGCAAAAAAAGCCTCAGCTCCAATTTCATGTTATGAATGAACATGTTAACTTCCATGTTGGTTTAAAACACACAacctctttgaaaaaaaaaaaaaagtcttgtgACCTGTAGTTGTACTCAGTGCTCAGTGCTGGTGAGGCCACCTTACTGGCTGAGGCACGAGCATAGCGGGGACCAGGGAGAGGATTCTGGGTAATAATAGATGACGTGTGCTAGCGTTATGCTATGCTACTGATTGTTTTAGTGCCTTTCTCTACAGGATGCTCGTCTTTCCCGTGTTTGCATTAGAATGTATACAGTGTACGTGGAGGAAATGCAGTCACCTCCAGTGCTGTGTAGTCTCACATCAAAGCTGTTTATGCACTACACACAGGATGTCCTATTTTTGTGGTAATAAATTTACTTTTATATGAA

Function

NR:

description
ral guanine nucleotide dissociation stimulator-like 2 isoform X1

GO:

id name namespace
GO:0043087 regulation of GTPase activity biological_process
GO:0051056 regulation of small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function

KEGG:

id description
K17636 RGL2; ral guanine nucleotide dissociation stimulator-like 2

RNA

RNA id representative length rna type GC content exon number start site end site
TU103292 False 3362 lncRNA 0.42 7 30102763 30109545
XM_039805562.1 True 4546 mRNA 0.48 22 30073937 30109138

Neighbor

gene id symbol gene type direction distance location
ntrk1 NA coding upstream 262148 29780179 ~ 29811789 (+)
LOC120562942 NA coding upstream 328756 29743009 ~ 29745181 (+)
LOC120562990 NA coding upstream 712812 29355633 ~ 29361125 (+)
LOC120562792 NA coding upstream 718395 29352141 ~ 29355542 (+)
LOC120562836 NA coding upstream 725114 29339254 ~ 29348823 (+)
pbx2 LOC103356852,LOC108245987,LOC101487230,LOC102193020,LOC100704063 coding downstream 16381 30125926 ~ 30133536 (+)
LOC120561633 NA coding downstream 26736 30136281 ~ 30137569 (+)
tap1 tap1 coding downstream 60469 30170014 ~ 30182142 (+)
brd2b LOC104928643,LOC103356858 coding downstream 76801 30186346 ~ 30205056 (+)
LOC120562234 NA coding downstream 95632 30205177 ~ 30212236 (+)
G77198 LOC103388947,LOC102796900,LOC101464846 non-coding upstream 175184 29894234 ~ 29898753 (+)
G77172 NA non-coding upstream 260396 29812931 ~ 29813541 (+)
G77114 bola1 non-coding upstream 488937 29582757 ~ 29585000 (+)
G77097 NA non-coding upstream 608385 29464612 ~ 29465552 (+)
G77033 NA non-coding upstream 634763 29433160 ~ 29439174 (+)
LOC120562092 NA non-coding downstream 8463 30118008 ~ 30121096 (+)
LOC120562235 NA non-coding downstream 107203 30216748 ~ 30218603 (+)
G77260 NA non-coding downstream 288731 30398276 ~ 30402704 (+)
G77399 NA non-coding downstream 867196 30976741 ~ 30977081 (+)
LOC120562708 NA non-coding downstream 868782 30978327 ~ 30988733 (+)
G77028 LOC104942601 other upstream 661524 29404008 ~ 29412413 (+)
LOC120562177 LOC104942602,LOC104934039,LOC103362363 other upstream 683884 29384135 ~ 29390053 (+)
G77009 ubqln4 other upstream 743679 29328789 ~ 29330258 (+)
mex3a mex3a other upstream 785389 29276147 ~ 29288548 (+)
pear1 LOC104932170 other upstream 829845 29179830 ~ 29244092 (+)
G77239 NA other downstream 14157 30123702 ~ 30124638 (+)
LOC120562443 NA other downstream 241950 30351495 ~ 30360588 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other downstream 577793 30687338 ~ 30731609 (+)
G77447 NA other downstream 1025284 31134829 ~ 31136146 (+)
G77682 tbx20 other downstream 1866773 31976318 ~ 31979909 (+)

Expression


Co-expression Network