G77260


Basic Information

Item Value
gene id G77260
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 30398276 ~ 30402704 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU103334
GTTGCACGGTTTTAACCACCCtctgaaaaaagtaaaacattaaaatgaaattttatggcatactataaTGACTTTCTTATGACATTCATATCTTAATGAAAGGAGCCACATATCATCTTTCTGAGGCCGCGCTCTGAGAAGCTATGCTCTAACTCTTTGATCATTACCCCCTCAGGGCCAGGCAGACCTACTGAAGCGCGCCAGGAGTGAAGTCCAGGAGAACCTCAAGCAGATCCACTATGCGGCGCTCACCTGTAACCTGAGTAAAGGCGGACCAGCAGGCAGCTCCTCTGGCTCGGAGTATAAAGGCAGACAAAGCCTCGAGGCCATTGCTGAGAAAGCCACCGCAGAGGAGGAGCTTACCGATGAGGACAACTAACGGCCCACAGTCCCACTCTGGTGCTCTCAAGGCACCCACATCCAGACCTCGACTTTGTTCCTGCCTCCTAAGCTCAAAACCCAAAGCTCTTGCTCCTTTACCACGCTTGGGCATCATCGCTCTACACACAACCAGTGTTTTTCCACATTCCACTGTGTACATTCCTGTATCCAAAGCACAGCTATAACCTCTCAGACTTCCGCTATGTAATCATCAATAAAATGCCCCCAAACACCAAGTTCGGATGACAAAAAAAGTTTGGAAAATTGCCATCATTATCTCTTAAAGTCTTAAAATATTTATGAGCTGTACTGAGAAGTGGTAAAGTATCATGACATTTGCTACACATCGGATGCTGCCTAGCCAATATGAGCACACTTTATCTAAATAACAAATCTTAACATCCAGCAAAAACCTAACTTTTGGGGATAATGCTGAAAGGGATATGTAGAAACGCTGATGATTATCGAAGCGTCTAACCTAACTTGAAACCGCATAAAGTTCACATACCTTTTCATCTATAGTCCTAATGCCTTCGTTTGTTGCCCTCCCGACCCCGTCTCTCATTTCCTGGGTGAGCTGGGAGAGCCAAGTGAACTAGCAGCCACGTGACCATTCAAGACGTTGACCTACTGTTCAGAGACAGTGCTCTTCTACTCAGCGGACCGGGGGTGTTACATGAGGAGACAACAAAGAAAAGGGCCCTTGAATTgcaccggcaccgttttaaaagtatcactttagcaccggtatcggaaaaaaaccaaacgatacccaaccctatttctGTCTGCCAGACAAATCAAACGAGTCACAACACTTTGATAACCCTTCATAAGAATTTAAACTCAGGTCTGTTGAGAAGATGGTTGAGAAGGATCTGAACTTCAGAGTAATTATAGCTTCATAACCATTTCTGGAGAGAAAGTAGTATCGGATCCAGTAGTATCTGACCCACAATTAACCTGGGATTTAATTGTGCCACATGCTAACTAAAACATACTGCATCAGTTGACAACTAGGTGTATAAGTGTATTTGCCTTTTAAAATGCCTTTTCCCCTCATGTTGCTTCAATTCCACTCTTgcttgctgttcatttaacatTCTAAATGTGCGTCTTTTATTTCAAATCTAATACACAAAAGTTATGATTCCTATTAGTTATACTTACTTTCTACTGATTGGACAAACAAGGCTTCAATGCTGCAATACATGCTATCTTCAGGAAAgttgtaactttcagtttttcTCAAACCTGCTTTGTGGTGGTCATTTTGGTGGCTGTGGTTTGTGGTGCTGTTAAGTTGTATTACATTATACTGAGAAGTGTTCCCAATATTTGTCCAAGTCTATATCAATGAGGGTAGGCTAAATATTAACTCAAAATGTAACCgcaccacaaactacagcctTGTTTCAACACCTCTCTGAAACAGTTTTGACAAACCCTGATCATTAGAACCTGTTGTGTAAGATTATATTATTTCTAACTAGGTGTCCccaataaactggcaactgagtcAATGTGGGCTTGCAAAACTAGGGCTCaaaaatttgagaaaaaaaatatcaaattgcCATTACTTCCTGTAAATTAAACTACAGGCCTGCATTTGTGCTCTACATAGTATTGATTCATTGGCAACTaatgctcgatggtgttttaagcccccaacgtcgacttcaaggcacctaacctaatcctagtgccttccagacgacgttgggggcttaaaacatcAAACACCGCAACTAATCATGTTAGCATGATGCGGTAATGCTTTCATTGACAGCTGTGCATTGTATCTTTGAACTAATGCTAACTCGATTTTAAGGTGATACACTTAAATTGATGTTATTTGCTGATACAATCTAACAATTGTGCTGTTTTAAATTGATTAGTTGTTCAGCCACACATAAAAGCTATAAAATCCAAAAGTAAAAACTTGGTAGTAGATACTCAGTTAAAGGCCTGCTTTAAGTCTGTACACATTAGctttataaattaattttacataACTGTAGCCACACTTGCTTCAAAGTATTTCCatggatttttttggggggcatgtGCTTAACATTAGTCGAAATATTGATCACCAGCAAGAAATCAATCACTTGAATTCACTTAGGAATTTCCACACATACAGTTATTGTTCTCTTTGGACTGTTAAATGACAATGCCCATCTGTCCATCTGCAGCTCTTTTATTTTCCCCCTCAGTGCTCACAATGTTTGGTTTTAAACACTGTCCACACTTCTCACGActaagacaaaaacaaatttcAGTGCTGTGCAAGTCGGCTTATTCCTAATTGTTgagagaatgaaaaaaaaatgaagcatTTCAACTGTACTCCAGTCTCATGTCTTTATCTGTcaagtccaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103334 True 2777 lncRNA 0.40 2 30398276 30402704

Neighbor

gene id symbol gene type direction distance location
LOC120562225 LOC103356864 coding upstream 7844 30362707 ~ 30390432 (+)
LOC120561719 vmo1 coding upstream 174752 30218997 ~ 30223524 (+)
LOC120562442 NA coding upstream 181581 30212639 ~ 30216695 (+)
LOC120562234 NA coding upstream 186040 30205177 ~ 30212236 (+)
brd2b LOC104928643,LOC103356858 coding upstream 193220 30186346 ~ 30205056 (+)
si:dkey-82o10.4 NA coding downstream 302327 30705031 ~ 30713391 (+)
LOC120562210 LOC103357958,LOC107379173,LOC102233395,LOC103388353,LOC100705137,LOC103477709,LOC106523089 coding downstream 506326 30909030 ~ 30949188 (+)
LOC120562211 ube2e1,LOC106534515,LOC101480162,LOC103357960,LOC100705406 coding downstream 548529 30951233 ~ 30965417 (+)
nr1d2a LOC103375162 coding downstream 565877 30968581 ~ 30976242 (+)
LOC120562709 NA coding downstream 586059 30988763 ~ 31008397 (+)
LOC120562235 NA non-coding upstream 179673 30216748 ~ 30218603 (+)
LOC120562092 NA non-coding upstream 277180 30118008 ~ 30121096 (+)
G77198 LOC103388947,LOC102796900,LOC101464846 non-coding upstream 499523 29894234 ~ 29898753 (+)
G77172 NA non-coding upstream 584735 29812931 ~ 29813541 (+)
G77114 bola1 non-coding upstream 813276 29582757 ~ 29585000 (+)
G77399 NA non-coding downstream 574037 30976741 ~ 30977081 (+)
LOC120562708 NA non-coding downstream 575623 30978327 ~ 30988733 (+)
LOC120562710 NA non-coding downstream 612429 31015133 ~ 31016447 (+)
G77555 NA non-coding downstream 1111432 31514136 ~ 31514561 (+)
G77554 NA non-coding downstream 1115059 31517763 ~ 31518618 (+)
LOC120562443 NA other upstream 37688 30351495 ~ 30360588 (+)
G77239 NA other upstream 273638 30123702 ~ 30124638 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other upstream 288731 30073937 ~ 30109545 (+)
G77028 LOC104942601 other upstream 985863 29404008 ~ 29412413 (+)
LOC120562177 LOC104942602,LOC104934039,LOC103362363 other upstream 1008223 29384135 ~ 29390053 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other downstream 284634 30687338 ~ 30731609 (+)
G77447 NA other downstream 732125 31134829 ~ 31136146 (+)
G77682 tbx20 other downstream 1573614 31976318 ~ 31979909 (+)
LOC120561717 NA other downstream 2002429 32405133 ~ 32421472 (+)
G77888 NA other downstream 2697709 33100413 ~ 33101534 (+)

Expression


Co-expression Network