G77555


Basic Information

Item Value
gene id G77555
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 31514136 ~ 31514561 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU103737
GGAATATCTCAACTAGTAAACTTTAAGTTAAGACTTTCCTAATGTGTAAACAGTTGGAAGAAAACATCTTCTGTGACAGCCAATCGGAAGCAATGACACAAAATCAATgtagcattaaaaaaaatataaaaaaatatctttagGGGGGCAAACGATATATTTATCTTATAGTAATTGCCAATACATTAATTGTAGGTAACTGTATGACTTCtaagtgtatgtgtatatgtaatatGTTTCAGATTTAGTAGTATTTATGCACTTGACAGCGAGGGAAATATTTGACAACACTAACCTAACTGACGTCATTTCGTCCAACGTTATTGGcgttaatgttttattttgaaagcattttgtgttgtctgtgaaataaaatgtgaaagttTACATCAGAATTTTGAGGGTTTGAAAGTGTTTGATAAGATT

Function

GO:

id name namespace
GO:0050877 nervous system process biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0007600 sensory perception biological_process
GO:0007601 visual perception biological_process
GO:0003008 system process biological_process
GO:0004112 cyclic-nucleotide phosphodiesterase activity molecular_function
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity molecular_function
GO:0008081 phosphoric diester hydrolase activity molecular_function

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU103737 True 426 lncRNA 0.31 1 31514136 31514561

Neighbor

gene id symbol gene type direction distance location
arl4aa arl4a,LOC103374731,LOC104928894 coding upstream 9474 31500830 ~ 31504662 (+)
si:dkey-30e9.6 NA coding upstream 15650 31497043 ~ 31498486 (+)
vwde wif1 coding upstream 64685 31444788 ~ 31449451 (+)
tmem106ba tmem106b,LOC103368608 coding upstream 79079 31426759 ~ 31435057 (+)
LOC120561996 LOC102798925,LOC101475373 coding upstream 312876 31176789 ~ 31201260 (+)
LOC120562640 NA coding downstream 403185 31917746 ~ 31932047 (+)
pkdc LOC102076377,LOC101468599,LOC102793757,LOC102209191,LOC102303972 coding downstream 428850 31943411 ~ 31947773 (+)
herpud2 LOC103361314 coding downstream 435061 31949622 ~ 31959398 (+)
dpy19l1l dpy19l1,LOC102792675 coding downstream 575597 32090158 ~ 32124377 (+)
LOC120562212 NA coding downstream 630831 32145392 ~ 32149331 (+)
LOC120562710 NA non-coding upstream 497689 31015133 ~ 31016447 (+)
LOC120562708 NA non-coding upstream 525403 30978327 ~ 30988733 (+)
G77399 NA non-coding upstream 537055 30976741 ~ 30977081 (+)
G77260 NA non-coding upstream 1111432 30398276 ~ 30402704 (+)
LOC120562235 NA non-coding upstream 1295533 30216748 ~ 30218603 (+)
G77554 NA non-coding downstream 3202 31517763 ~ 31518618 (+)
G77558 NA non-coding downstream 10622 31525183 ~ 31525583 (+)
G77591 NA non-coding downstream 96497 31611058 ~ 31611311 (+)
G77592 NA non-coding downstream 97920 31612481 ~ 31614315 (+)
G77593 NA non-coding downstream 108266 31622827 ~ 31623166 (+)
G77447 NA other upstream 377990 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 782527 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 1153548 30351495 ~ 30360588 (+)
G77239 NA other upstream 1389498 30123702 ~ 30124638 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other upstream 1404591 30073937 ~ 30109545 (+)
G77682 tbx20 other downstream 461757 31976318 ~ 31979909 (+)
LOC120561717 NA other downstream 890572 32405133 ~ 32421472 (+)
G77888 NA other downstream 1585852 33100413 ~ 33101534 (+)
bmper bmper other downstream 2311526 33826087 ~ 33879132 (+)
LOC120562157 NA other downstream 2379799 33894360 ~ 33904285 (+)

Expression


Co-expression Network