LOC120562592 (dgkb,LOC102796570)


Basic Information

Item Value
gene id LOC120562592
gene name dgkb,LOC102796570
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 31612436 ~ 31626881 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU103784
ctctttaatgttttatgtaaagcactttgaattgccatgTTGCTGAAATGTACTATACAAACAAAACTGCCATGCCTTGCCTATAACAAACAATGAATACtccaatacaaaaataaattatttgtgtAGTCATGAGAGAATATAATGTACCATAGCAGTATGCGGACAGATGGTAACTCACCCCTGCCAGGTCATTGATCATCAGCCTTAGCTATGGGAGTGTGTGCTGTAGGAAGCCCAGGGAGCAGCACCACAGTCCTCTGTTAATTGCAGGGGCAGTTAGATTACCCTCTTACAC
>XM_039806387.1
ctctttaatgttttatgtaaagcactttgaattgccatgTTGCTGAAATGTACTATACAAACAAAACTGCCATGCCTTGCCTATAACAAACAATGAATACtccaatacaaaaataaattatttgtgtAGTCATGAGAGAATATAATGTACCATAGCAGTATGCGGACAGATGGTAACTCACCCCTGCCAGGTCATTGATCATCAGCCTTAGCTATGGGAGTGTGTGCTGTAGGAAGCCCAGGGAGCAGCACCACAGTCCTCTGTTAATTGCAGGGGCAGTTAGATTACCCTCTTACACCCCTCACTGGGCCTTAATGTTGGGCATGGGTACCCACTGGCCACCCCATGTGTTCCCTCAGTAAGCCACATTATGCATTTTTTGGAGATGAATGTGTGATTTTGGTCAGCGGTAAACAGAGGTATATTTCCTGTGTAGTTTAGAAAATCCTTTTTTCAAGCGTGAATCAAACACACCTTTACAGAGTGGTCTCTTTTTCCTAAGCTCAGCACATAagagacagaagagaagaagagaggctATGACTTTACAAGCTTCAGATTTTGATGTGGGGAAAACACTCCTATGTTTCCTCTTTTCTTGGTCCCTTTGTAGTTCCctttgtcttgtttctttcaGAACAAAGAATAAGCTGTGGTACTTTGAGTTCGGCACTTCGGAGACCTTTTCGGCCACATGTAAGAAGCTCCACGACTTTCTGGAGGTTGAGTGCGATGGTGTCACTCTGGACCTCAGCAGCATCTCCTTGGAAGGCATTGCCATTCTCAACATTCCCAGCATGCACGGCGGCTCCAACCTTTGGGGCGAGACCAAGAAGAGGAGGGGTAACCGCAAGGGGGGCAAAAAGAGCCAAGACAAGAGGACACCAGTGCTCGACCCCAAGGAGCTCACGTTTGCAGTTCAAGACCTGTCTGACCAGCTGCTGGAGGTAGTGGGGCTGGAAGGAGCCATGGAGATGGGTCAGATCTACACCGGCCTGAAGAGCGCTGGGAGACGCCTGGCACAGTGCTCCTCCGTTACCATCAGAACCAGTAAATCCCTCCCCATGCAGATTGATGGGGAACCTTGGATGCAGACTCCCTGCACTATTGAGATCGTCCACAAGAACCAGGCTCCCATGTTGATGGGAGCGCCACAATGCCGAAGCTTTTTCTCCTCCGTCATCAGACGAACACGCAGCGAGAGCAAAGACTGATCGGTTCAAGGCCTTTTCGAGTCCTCACAAGCACCTGGAGAGCAGCGAGCCACAAGTTGATCATCACAGCCCGTTAGTGAAGGGGGACTCTTTGACAGCCCAGCGCAAAGTAGCAAACTGTAGGTTCAGTATGTACCTCCTGCAGGGTGGAGACGTCACTGAGTAGCCCTTATTTAATGCAGAATAAGGTGTGTTAAGGAATGATGCTGAATGAGTCAACAGTGTGTAGAGTAGTTTAGCTCCAAAAATACTGAGGCTATTTCGGGAAGTCCAATTTTATaaaagtctgtttttatttttgctgttgTGATCTGTGCCATGTGGACAAAACCCACagatgaatgtgttttttggggatatgatttatttatttattcatattttgctGCTATTGATGTTTTTTAACAGATTTTTGCATTTGCATACCCCTGATGCATGATGGACAGTGAAAGAGGTTGCTGATGTTGAAGCTGACATATCTGGAGCTCGCAGACGATCTTAGCCAAGCGTTTAGTATGAAGTGAAGTTTCTTTGCTCAGCATTTCATCAGCGCTTCACTCATGAATGGCTTCACGTTGTGAAAAGACAAAGAATCACTTTTGCTCTCTTTTAATGGTTCCTGCAAGTCATCCTTGTCATGTTTTTGATCTGCCGTGTTGCTGTTCCGTCAGTGGAAAGATTAGGAATGATTATTGACCTTCATAAAAAATGCATGACCCTCTTTGTTTTACGTCGCACGAGAGATTTCCAGACAGTTTTAATAATTGTGCGCACACTTTGTGTTGCATGAGTGACCAAGATCGGTTTTGATACTTGTGGAAATTGATTGCTTTTTTTAATCTATGTCTAAATTGCTGCTCGGTTTAACCATATCATACTTTACAAGATGGCTGCATTTTTATGAgatcctgtgtttgtttgttttttaacaggTACACATGtacttttaaagtttaaaaaaaaagcaacagaaaagaGCCTAGTGTTTGATCAGACTGTATGTTGGTACAGTGACTGTAGAGTTGGATCTTCACAAGAAGCGGTTTGACCTCTGGTCATTGATTTGTTCTGATGTCTACGGTTGAGTGTTTACAGTCCGCTGCGTATAAAAGCGTGCATTGACCAATTAAAGTCTAAATACAAAATGACTATTGACATTTATAGTACAAGCTTGATTTAAAGAATCAATACTGAAAATCAATCCCATCCAATAATTACAGTTTTCAGAGGCATTTTACAGCAACTGACGTGCACATGCCATCtataaattatttaataatgcacttttcattcattttaaactGCTTATTTCATTTGAGTGTCCTGTTATATGATATTATTCTGGATGGTAATGGCAATGATtgagtaggctacatttctACATTTTAATAGTATTTATCTCATTCAGTCTCACCAAAGACAAATTTCAAATTTTGGGTGATTTTTTACAGATCTACCAGCGTGACCAACACCTGATAAATGTGTTGTTATTAACTGAATTGCACGCCTGCTTCAGTCTTTAAAAGTGCCATACGCCAGTGGAGACTGAGGTCTGATGAGTCTCCCATCTCATTGTTTTGTACGGTGCTGCATTTGTAGAGTGACGTTGTATTTTTGTacatagtatttatttatttatttgtccgCTTACTGCTTTCACTCTAGAACTCACACCATGTTGTTCTGTCTAAAAAAATATTCTGCCTCCCAATGTTAACTGGGAAAAGTGATattagaaataataataataaaaaaaatcttttgttgTTTGA

Function

symbol description
dgkb Predicted to enable diacylglycerol kinase activity. Predicted to be involved in diacylglycerol metabolic process; intracellular signal transduction; and lipid phosphorylation. Predicted to act upstream of or within phosphorylation and protein kinase C-activating G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human DGKB (diacylglycerol kinase beta).

NR:

description
PREDICTED: diacylglycerol kinase beta

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103784 False 298 lncRNA 0.41 1 31626584 31626881
XM_039806387.1 True 2986 mRNA 0.42 5 31612436 31626881

Neighbor

gene id symbol gene type direction distance location
etv1 etv1 coding downstream 5697 31583712 ~ 31606739 (-)
vwdel vwde,LOC104960470 coding downstream 110989 31449472 ~ 31501447 (-)
LOC120561970 nxph1 coding downstream 374627 31222414 ~ 31237809 (-)
ica1 ica1 coding downstream 397879 31202580 ~ 31214557 (-)
col28a1b LOC104951329,LOC103370330 coding downstream 449551 31133190 ~ 31162885 (-)
LOC120562591 dgkb,LOC102796570 coding upstream 36104 31662985 ~ 31724615 (-)
agmo agmo coding upstream 103153 31730034 ~ 31807415 (-)
meox2a meox2 coding upstream 182846 31809727 ~ 31820889 (-)
crppa ispd,LOC102293652,LOC104960397 coding upstream 237111 31863992 ~ 31916872 (-)
sostdc1a sostdc1 coding upstream 291175 31918056 ~ 31922708 (-)
LOC120563104 NA non-coding downstream 37033 31547784 ~ 31575403 (-)
G77577 NA non-coding downstream 88469 31523644 ~ 31523967 (-)
G77572 NA non-coding downstream 96037 31515230 ~ 31516399 (-)
G77571 NA non-coding downstream 97267 31514130 ~ 31515169 (-)
LOC120562002 NA non-coding downstream 435603 31166789 ~ 31176833 (-)
G77608 NA non-coding upstream 16196 31643077 ~ 31643282 (-)
G77695 LOC100691736,LOC103361314 non-coding upstream 330368 31957249 ~ 31961651 (-)
G77718 NA non-coding upstream 495694 32122575 ~ 32124370 (-)
G77720 NA non-coding upstream 497783 32124664 ~ 32127330 (-)
G77741 smarcc1 non-coding upstream 545170 32172051 ~ 32174497 (-)
G77573 NA other downstream 93400 31516455 ~ 31519036 (-)
LOC120561969 thsd7a,LOC103477695 other downstream 215933 31239787 ~ 31396503 (-)
LOC120561999 NA other downstream 498344 31109791 ~ 31114092 (-)
G77433 NA other downstream 567415 31044374 ~ 31045021 (-)
phf1 LOC102303017,LOC101464564 other downstream 1543446 30000855 ~ 30068990 (-)
tbx20 tbx20 other upstream 349603 31976484 ~ 31990365 (-)
LOC120561540 LOC104957162,LOC106526711,LOC102237165 other upstream 798484 32425365 ~ 32434867 (-)
sema6e sema6c,LOC103360390,LOC104932808,LOC100704625 other upstream 853763 32480644 ~ 32644969 (-)
ensab ensa,LOC103369031,LOC100695493,LOC101487776,LOC102787866,LOC102291346,LOC102199757,LOC108243249 other upstream 1395217 33022098 ~ 33032895 (-)
LOC120561932 NA other upstream 1963640 33590521 ~ 33602948 (-)

Expression


Co-expression Network