G77683


Basic Information

Item Value
gene id G77683
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 31980051 ~ 31982392 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU103882
ATCCTACGTTAAGTTCTTATTTTGTTCTCGTCTCCTGTATCCGTGCTGACTGTTTTGGGTGCGACAGCCACTCACCTCTGGTGTGTGCGGTGTGTCCGTCCTCGCTCAGGTTCTCCTCGTCGCCAGCGTAGGTACGGATCGGCGACCGGGCGTACGAGTGCTTGTGGATCAGATTCTCAACACTTTCCCTGCTCTCCATGTCCGTCAGCCGCGACGAGTCCCGGAACCCTTTGGCGAACGGGTTGCTGTCAATCTTCAGTTTGGTGATCTGGGAAACGCAGCGGGAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103882 True 289 lncRNA 0.56 2 31980051 31982392

Neighbor

gene id symbol gene type direction distance location
herpud2 LOC103361314 coding upstream 20653 31949622 ~ 31959398 (+)
pkdc LOC102076377,LOC101468599,LOC102793757,LOC102209191,LOC102303972 coding upstream 32278 31943411 ~ 31947773 (+)
LOC120562640 NA coding upstream 48004 31917746 ~ 31932047 (+)
arl4aa arl4a,LOC103374731,LOC104928894 coding upstream 475389 31500830 ~ 31504662 (+)
si:dkey-30e9.6 NA coding upstream 481565 31497043 ~ 31498486 (+)
dpy19l1l dpy19l1,LOC102792675 coding downstream 107766 32090158 ~ 32124377 (+)
LOC120562212 NA coding downstream 163000 32145392 ~ 32149331 (+)
smarcc1a smarcc1 coding downstream 183927 32166319 ~ 32193048 (+)
LOC120562445 NA coding downstream 222362 32204754 ~ 32212177 (+)
cspg5a cspg5,LOC103364230 coding downstream 246611 32229003 ~ 32293702 (+)
G77669 NA non-coding upstream 37257 31942035 ~ 31942794 (+)
G77666 NA non-coding upstream 44989 31933085 ~ 31935062 (+)
G77593 NA non-coding upstream 356885 31622827 ~ 31623166 (+)
G77592 NA non-coding upstream 365736 31612481 ~ 31614315 (+)
G77591 NA non-coding upstream 368740 31611058 ~ 31611311 (+)
G77684 NA non-coding downstream 76 31982468 ~ 31982716 (+)
G77685 NA non-coding downstream 3074 31985466 ~ 31985740 (+)
G77687 NA non-coding downstream 7494 31989886 ~ 31990370 (+)
G77722 LOC102207529,LOC102306104 non-coding downstream 156385 32138777 ~ 32140143 (+)
G77757 NA non-coding downstream 312703 32295095 ~ 32295320 (+)
G77682 tbx20 other upstream 142 31976318 ~ 31979909 (+)
G77447 NA other upstream 843905 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 1248442 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 1619463 30351495 ~ 30360588 (+)
G77239 NA other upstream 1855413 30123702 ~ 30124638 (+)
LOC120561717 NA other downstream 422741 32405133 ~ 32421472 (+)
G77888 NA other downstream 1118021 33100413 ~ 33101534 (+)
bmper bmper other downstream 1843695 33826087 ~ 33879132 (+)
LOC120562157 NA other downstream 1911968 33894360 ~ 33904285 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 2008150 33990542 ~ 34042648 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G237985 NA non-coding CI01000055 null 980809 ~ 990495 (+)
rainbow trout (Oncorhynchus mykiss) G236235 LOC106581161 non-coding NC_048567.1 CM023221.2 23040257 ~ 23042307 (+)