G77762


Basic Information

Item Value
gene id G77762
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 32374697 ~ 32376913 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU103989
gtagcatttaaaaaaaggtaaaatggcACCAGAAGTCCATCAGAAACAATTGGTTTTCTATAACAGGCACAAACTGGGACATCTGTCCTTTAGTGCTACCATCCTAATCAAATACATTATATCTGTGCGAGGAATTATGTTTCTgatagatctatctatctatattctaATGGCTGAAAAGAAATTAATCAATTTGAATTTCGACAGGTGCTGGACCAAACAAGAAACATCAAGGCAGAAAGAAATAGAATTTGCACACAGTTTCTGTGCTCCCACAATCATTTTTTTATCTACCGTTACTGTGCAGTTTTGATTAATCATACATCTTAATGAGgcataaaacatttaatttcacaTGATATACATATCTCCAAACGATGCCAATAAGCAGCAGGTATCTGTCTTATAGACAGTTTGCTACACCCCCAGGGAAACTGTTTACTCTATTCCGAACAACTGGAGGGTGAAGCGATATATGTTGCTTATTGTGATTGCTTTCAgatctgtgtatatatgtatgcttGTGGAAATGCTTTGCGCCTGATAGATATGTTTGATTGAAATGTTGCACATGAACAGAGCAGATTCTATTTATTTATGCTTCAAAACGCTGATATAAAGTAAATTGGTTGGTTTAAAATTCAGGGGGCAGAGCCAAAGAATACACTGGTATGGTACTGTTTAAATCTATAATTCAGCAAATGGTTTCCATTGTGCACAAAACAAGCATCTGGAAATGGTGGTTTTCAGTGTCATTTACTTAGGACTGCATGTCACAGAAACCAGGCTTGTGACCTGCTTGGCATTGTAGCCTGTTAATTTATTAGCTTGTTTTCTGTTGTAAACGGTAGTCGAGAACGCTTTAGAAACAGGAAaatttgtagtttttttgttgttgttttttacttaTGTTTTCTAGCAATGTGAATTTGATTTAAAGCAAAAGGTGGACGTTTTGGGAAATCTGCTTAACGTTTTTCGCTTTCTGGCAGGGAGATTTGAATAAGAAGGTCGATGCCACGCAGTTTAATATTAGCTAAACCAACGGTTAACTTAAagctagctaggttacacgaagactggaaatggggaaacggctagctaacgttagcctggcTCTCTCAGATGCTAACCAAATGTACTCACCAGCAACTCAAAGCTCAccagctcactaattaacacgttggttgtatctttattttatttttttaccaattAATTAAACAATATCACTTATTTCCTTTGCTTTGTTGACTAATGAGCTGCTGTAACAAGTGAATTTCCACGgagtgggatcaataaagtttatcttatcttatatcatagatatatacacatatcTATTATCgtatataatgtgttaattagttagctagctagcttaagaAGTGCTGGTGACTGTGCCAGGCTGGTTGTTCTCCCGTTTCCGCTCTTTGTGCTAAACTAACCTGCTGCTGGCAGTAACTTTATATCTTTTATAAGCGTGGTATCTCCTCGTCTAACAGTTCACCAGTCAGCTAATTAaaagtatttcccaaaatgtctagCTATTCCTTTAAAGATGGGTGGTGTGGCAATTTCACTTGAATTTTAGCTTCTTTTGAATGTTTTTGGACTTGGCCTTGTAACAATCCATTTCCAACACTACTTTGTCAGTTAATATGATTCTGCCCAATTTATTTGAGTAAACCATGCTCGTTAACTGCTGCTTCCAAACATACCTTTTCATCCTGTTGCTTTCTTTCACCCGGCTGTCAGCGTACCATATCAAAAGTCTGTGGATGCAGCCGTGACATCCTCCTGTCCTTTTGACTTGGTAAAGGACCATGTCCTATGGCTGCATCCTTACAATAACGGCAGAGCTCTGAAATGAACGCTTTGTGGTCCACATCTGATCCTCCACCTCCTGCCTAAACGAGTAGAAATCAGATGTatcatttcatttctttctgtttAGACAGCTGTCAGGAAAATCAGAGGtgtggcagaaaaaaacaactaacaTTTAGGTTTATTTAACCCCCAGGTCTCCTCCCTTTATTGGCAGGCTACAATCTACACAGGCTGTAGTAGTGGAGGTTATTTAATTTACTATtttttaacacacaaaaaaagcgcAGACTTTGTACTAATTTTCAAATAAAGAGGCTTTGATACCACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103989 True 2163 lncRNA 0.37 3 32374697 32376913

Neighbor

gene id symbol gene type direction distance location
LOC120562270 scap coding upstream 510 32315022 ~ 32374187 (+)
elp6 elp6,LOC102790853 coding upstream 59784 32309084 ~ 32314913 (+)
cspg5a cspg5,LOC103364230 coding upstream 80995 32229003 ~ 32293702 (+)
LOC120562445 NA coding upstream 162520 32204754 ~ 32212177 (+)
smarcc1a smarcc1 coding upstream 181649 32166319 ~ 32193048 (+)
LOC120562193 LOC103388706 coding downstream 476444 32853357 ~ 32888350 (+)
tnfaip8l2b tnfaip8l2 coding downstream 515618 32892531 ~ 32900329 (+)
scnm1 LOC104949611 coding downstream 528448 32905361 ~ 32911192 (+)
LOC120562446 NA coding downstream 570398 32947311 ~ 32950710 (+)
hormad1 NA coding downstream 655326 33032239 ~ 33049137 (+)
G77764 NA non-coding upstream 5619 32360545 ~ 32369078 (+)
G77757 NA non-coding upstream 79377 32295095 ~ 32295320 (+)
G77722 LOC102207529,LOC102306104 non-coding upstream 234554 32138777 ~ 32140143 (+)
G77687 NA non-coding upstream 384327 31989886 ~ 31990370 (+)
G77685 NA non-coding upstream 388957 31985466 ~ 31985740 (+)
G77776 NA non-coding downstream 76274 32453187 ~ 32453410 (+)
G77862 NA non-coding downstream 389358 32766271 ~ 32766508 (+)
G77867 NA non-coding downstream 444330 32821243 ~ 32821488 (+)
G77883 NA non-coding downstream 551421 32928334 ~ 32979901 (+)
LOC120563080 NA non-coding downstream 575064 32951977 ~ 32952703 (+)
G77682 tbx20 other upstream 394788 31976318 ~ 31979909 (+)
G77447 NA other upstream 1238551 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 1643088 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 2014109 30351495 ~ 30360588 (+)
G77239 NA other upstream 2250059 30123702 ~ 30124638 (+)
LOC120561717 NA other downstream 28220 32405133 ~ 32421472 (+)
G77888 NA other downstream 723500 33100413 ~ 33101534 (+)
bmper bmper other downstream 1449174 33826087 ~ 33879132 (+)
LOC120562157 NA other downstream 1517447 33894360 ~ 33904285 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 1613629 33990542 ~ 34042648 (+)

Expression


Co-expression Network