G77883


Basic Information

Item Value
gene id G77883
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 32928334 ~ 32979901 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104133
ttcaaaatgtatGTAGGTTTCTTATTAACAAACGTTTTGGAAAGAAAAACATTGTGGAATAAAATTTGTATAATAGGTACAGAATAATAACATAATGataatcaatattttgtaaAGTGCAAACAGCAAAGCATTTCTAAAAGCTTATTTTCCTTGTAATAATATGAGATTGGCTTTCTATAACACAACGGAACAATATATGGAGGATTATTAGGGccaaatgaagaagaaaaaaaagaatatgtaTTTGAGTTGTCAGattaccagtccttccagaaaaacgcagagtttttttgtgattgttgcgggcaaaaatccttgattatgcagcacgttttcttaaaaaatgcgatggaatatgcgggagatttatgcaattttatgcaatgaaattcaTGTTCAATGTTTACGTTGCGTAATTATAtaacttcataacgttcccatggcaacagaggaaaatggctgctcttgtgtgaagtaaacgcaacattttttcaactttctgctaagatatatgtgacttttttgcaacaaaaatgcggggattatgaaatcatgcaagcaccgcatattttgcgcggaaatctgcaatttatgcagccatatttgaaaaaatgcggcccccgcataaatatgcggactttggcggattatgcattgaattatgcaatcgcataatcgcatttttctggagggactgaagaaaatgttttcacatggCCTTAATCGTCATTTGTAAACAACACATGAACAGACATGAagtaaacagttattaatggaTTCGTTTTCCATGAAATGAGCATCGGTCTAAAAACAAAAGAGCAAATACATGTGTTTATGAATATGATGTGGTGGCTGACATCAGCGGGACCTCGAAAGTAACAAACCACCTCGTGGAAATAAAGTCACTGATTTGAATCCCCAAATTAACCCGGAGAATCTTGTGAGGAaactatttctctctctctctctctcgtctctctctctcttatgtaCCTCTCATATCGAGCCATGCACAGTTCCAGTTTTTCTTAAAGTGACTTTTGAGATATTCATATCGAAAAACATCTGCTGCCACCCACATACAACAAAGGTCAGtgacatttttacttttgtagCTCAAAGCATTGAGGAAAACTCAACAGCATCATATTTGTCCACAAACAACTGCTTTACTGAGATCAAATGTCACAcggaatttatttttttctcagtaGAAAGAAGTTCCAATAAAAACTATTGTGAATAGGTAAATGAGTAACCAGGACACTGTTTCTGTAAAAAGTACTTcctgttaaatgtttttaaatgtcatttttcaatagcacaaacaaacatacactcaTCTCTATTGTATAAGGGTGGAGGCAGCAATCTTAGAAACATATCTCAAAACATTTTGCATGCAGATACTGTTCCTCagtttgggtgaactgaccctttaaggcagtgacacaccaacccgataatcggccgttggacagtctggcgaggtcggtgactcgagtctgttcggtgtgtcccgtgctgtcgtccgtccgaggggctgTCGACCTTCATTTTGACCGACCTGACATGTTGcgtcggagggcgggcagtcggactccatgaccaatctgattggtggagtgctaacccggaaatgacgagcgggatttGCGCGACTAGAGTCTGTCAAAATCtaacgaaaatcttttaaactgacctttgtcgatctgaaatgaagacagattcagcaactgcacggcctatttctcgcttaaaatgttctcagaaacacgtttcggtgaactaatttagtacaatatgagatcgtattctgaacgagtcTGGCTTTGGATTTCctgagaaaccagacccacgtgacgcgtccaatcagctgctgtcGGCAGTCGgcatcgcttcggtgtgttccgaggcactttttttggCCAACTCGGCTGAAGGTCGGCCGTCCGGTTGCCGTGTCACCGGCTTAAACCGCACATTATCCAATGGAGGTGATCAGTGCACAGTAGGGGACAATGTAGGAAACTGAATGGATACAAAGTTAAGAACTGACATTAAAGTGCATGCTTATAAAACCCAGGAAAAAAACAATGCGTGAAAAGAATGGGATAAACTTGTGCAATCTGCTGCAGAGTGTTGAGGGGAAGAGCTCCATTCTGTTTAAGGGATAATACCCAGAATCACAGTGTTCAATCAGACGATGACGGAGGATGCAGTCATCTATGGTGCTGAAGAACAGGATTGCTGTTTAGAGCTGACATACGTCCTTCCTGGTATAGGTTTCTTTCCATTGTAGAGTGTTCGGAGATCGCTGGTtctcacattacattacaggaACTGCAAAAGCCAGAAAACAGAGGTTACTACATCATTTCTCAGCAAACCCTGATCATCATCCATCAACCAGAACACATGGAGAACTCTGGTTTCACTGCTTAAAGGAACAGGCCGACTTAtcgggactttgtcttattccccgtatcccccagagttagataagtccatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104133 True 2516 lncRNA 0.41 2 32928334 32979901

Neighbor

gene id symbol gene type direction distance location
scnm1 LOC104949611 coding upstream 17142 32905361 ~ 32911192 (+)
tnfaip8l2b tnfaip8l2 coding upstream 28005 32892531 ~ 32900329 (+)
LOC120562193 LOC103388706 coding upstream 39984 32853357 ~ 32888350 (+)
LOC120562270 scap coding upstream 554147 32315022 ~ 32374187 (+)
elp6 elp6,LOC102790853 coding upstream 613421 32309084 ~ 32314913 (+)
hormad1 NA coding downstream 52338 33032239 ~ 33049137 (+)
onecutl LOC106524064,LOC104923936,LOC108243192 coding downstream 107289 33087190 ~ 33096138 (+)
lingo4b LOC104947071,LOC108243198 coding downstream 196008 33175909 ~ 33200642 (+)
si:ch211-113g11.6 LOC103362574,LOC103388694,LOC108243248 coding downstream 226806 33206707 ~ 33260917 (+)
tlr18 LOC103362575 coding downstream 283829 33263730 ~ 33278517 (+)
G77867 NA non-coding upstream 106846 32821243 ~ 32821488 (+)
G77862 NA non-coding upstream 161826 32766271 ~ 32766508 (+)
G77776 NA non-coding upstream 474924 32453187 ~ 32453410 (+)
G77762 NA non-coding upstream 551421 32374697 ~ 32376913 (+)
G77764 NA non-coding upstream 559256 32360545 ~ 32369078 (+)
G77887 LOC103369030 non-coding downstream 37620 33017521 ~ 33050500 (+)
G77890 NA non-coding downstream 42197 33022098 ~ 33029791 (+)
G77897 NA non-coding downstream 71579 33051480 ~ 33052859 (+)
G77895 NA non-coding downstream 117727 33097628 ~ 33099548 (+)
G77899 NA non-coding downstream 122002 33101903 ~ 33105633 (+)
LOC120561717 NA other upstream 506862 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 948425 31976318 ~ 31979909 (+)
G77447 NA other upstream 1792188 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 2196725 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 2567746 30351495 ~ 30360588 (+)
G77888 NA other downstream 120512 33100413 ~ 33101534 (+)
bmper bmper other downstream 846186 33826087 ~ 33879132 (+)
LOC120562157 NA other downstream 914459 33894360 ~ 33904285 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 1010641 33990542 ~ 34042648 (+)
G78200 NA other downstream 1549454 34529355 ~ 34544379 (+)

Expression


Co-expression Network