G77897


Basic Information

Item Value
gene id G77897
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33051480 ~ 33052859 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104154
caacaatgtgaacagaatggtcgacgcactttcacctgcacccgtcaggaaacgggagaaagctttgaagtgggacgtatgaagttatgtccacaactacgagggtgtgacttaagtacccgttgagctgcatcacagctgcactatgtgcatggacctgtgccagtcagaacatcactcacctgtgtgcagaggacaggcagcagtagcacaaaccaagaagggtgcacaaccaggcctgggagagaaaattac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104154 True 255 lncRNA 0.51 3 33051480 33052859

Neighbor

gene id symbol gene type direction distance location
hormad1 NA coding upstream 2343 33032239 ~ 33049137 (+)
LOC120562446 NA coding upstream 100770 32947311 ~ 32950710 (+)
scnm1 LOC104949611 coding upstream 140288 32905361 ~ 32911192 (+)
tnfaip8l2b tnfaip8l2 coding upstream 151151 32892531 ~ 32900329 (+)
LOC120562193 LOC103388706 coding upstream 163130 32853357 ~ 32888350 (+)
onecutl LOC106524064,LOC104923936,LOC108243192 coding downstream 34331 33087190 ~ 33096138 (+)
lingo4b LOC104947071,LOC108243198 coding downstream 123050 33175909 ~ 33200642 (+)
si:ch211-113g11.6 LOC103362574,LOC103388694,LOC108243248 coding downstream 153848 33206707 ~ 33260917 (+)
tlr18 LOC103362575 coding downstream 210871 33263730 ~ 33278517 (+)
s100a1 s100a1,LOC105028680,LOC106605324,LOC107587912,LOC107689908,LOC107663298,LOC107598020,LOC108272706,LOC108441918 coding downstream 230188 33283047 ~ 33286346 (+)
G77887 LOC103369030 non-coding upstream 980 33017521 ~ 33050500 (+)
G77890 NA non-coding upstream 21689 33022098 ~ 33029791 (+)
G77883 NA non-coding upstream 71579 32928334 ~ 32979901 (+)
LOC120563080 NA non-coding upstream 98777 32951977 ~ 32952703 (+)
G77867 NA non-coding upstream 229992 32821243 ~ 32821488 (+)
G77895 NA non-coding downstream 44769 33097628 ~ 33099548 (+)
G77899 NA non-coding downstream 49044 33101903 ~ 33105633 (+)
G77900 NA non-coding downstream 53350 33106209 ~ 33106571 (+)
G77903 NA non-coding downstream 58567 33111426 ~ 33112065 (+)
G77894 LOC103369035,LOC103362570 non-coding downstream 62416 33115275 ~ 33130873 (+)
LOC120561717 NA other upstream 630008 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 1071571 31976318 ~ 31979909 (+)
G77447 NA other upstream 1915334 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 2319871 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 2690892 30351495 ~ 30360588 (+)
G77888 NA other downstream 47554 33100413 ~ 33101534 (+)
bmper bmper other downstream 773228 33826087 ~ 33879132 (+)
LOC120562157 NA other downstream 841501 33894360 ~ 33904285 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 937683 33990542 ~ 34042648 (+)
G78200 NA other downstream 1476496 34529355 ~ 34544379 (+)

Expression


Co-expression Network