G77949


Basic Information

Item Value
gene id G77949
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33099816 ~ 33101537 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104212
TTGGGTTACAAAtgagtcatttttatttatttttttagtgcaACATCACAACAAACAATTTTCACATGAGGTATTCAAAGGGATTTTTCTTTAGTTGTTGATACAAAATGTCCCACCATGATTGACGTTTAAAGTGTTGTgtatcttcatttttttttttgtttagtttttttttaaagcctttgGTTGGTTAGCCACATTCATTAGTAAGTCTAACACATGGACGAGAATGGCACGATAAAGCATGGTGGGTCGAGTCCAAGCCGAGGAAACTCCGACTCAGTCAAATATAATATTTCCCTCAGCTCTTCCCCGTTTAAAGCTTTTTGTATGGATTTCATTATTTCCTACTTACAACAGTGGGATCGAACAGTATTTCAACTACactaaacattttgaaaaagaaaaaaaaaactgggggGGGTGGCAGGGGTGGCTTACAAATGTGGAAAAATAGCTTCTGTCTCCTCCGAgcttgttatttttgtttttggatgAGCGCTtgatttttgggcttttctgttACAGCAAGAGCACGTGATTCGAGTTTTTCGGTAAAACAAGGAATAGGCAACGTTGATTACAGCAAGATCCTCCTTGCTTGGATTGTCacctccttcttttttttttttttttttttggtcttgaGAATGATTTTGGTATTTATATACAGGACATGGATCGATGGGACACTCTGGCATACTGGACTTAAGCTTTGGCTGGACAGGGGGGGCCCTCGTTCGGCTCCTGTTACGGATTGATTCCAGCACATTTGGTTTTGGAGTAAAAAGGCATGAAGAAGAGACGGATGGACAGACaagatagataagatagatagacagatagacagacacccTGACAGGATGGATTCTTTGGTTAAGGAATATCTTTGCCACACGACATCTCACACAGTTGAGGTAGATGGGTAAAGTCTTCATGTACACACAGGGGAGAGGGCGGGGACAGACTGGGGCGGGGGGGTAGGGTGGGGGGACACTGGGGATTACAGAGTCAAAAGACTTCCATCTGAAGACACTGCCTCATGTCAGTTTCTCAGTTCCAGCTCAACTTAATACTGTTTTATGCAACATAAATAATCAGCACGCGGAACCCAACaggtgcttttctttttttttttcaatcctcTGAGTGCTACGGTAGCTCTGATAGGGAACTGCTAAAACTACCCATGATACATATTCAGCAGTTACCCATCAAtctttggttgttgtttttttttttttttttttggtttaaacATAAaagtttggctttttttttttttctctttttttattctgaaagtACATATTGGCTTCCAGTTCAGCTATTTCGTTATTACGGCTCCCTTCAGAATTGCTCTGTTAACGGCCTCGGCTGCCAGACTTGTTTCAGTGTCAAGTTTCTAGAAGAGCCACTAGGGGGTGCCGCAGGCTAAATTGGCAATGCTGGTCAACTGCAGCAGCCAACTGAATTCACTCctcccaccctccctccctccctccctccctccctccctctcgccTCCCATCTGTACAGAAAGGGAAGAGCTTCCCTGTTTGACACGGAGCAGAAGGTGGCTTAATACAAAAAGCTCTGTCTCCATTTTAGGCTCGcagtcagacagacaaagagaaacCTGAAAGGTGTCACCTCAGCTTTGATACAATGACAGTAGTGAGCAGGGGTCGGCACAGGAGCCTCAGagctcttttattttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104212 True 1722 lncRNA 0.42 1 33099816 33101537

Neighbor

gene id symbol gene type direction distance location
mcl1b NA coding downstream 78741 33018705 ~ 33021075 (-)
tmod4 tmod4,LOC102789303 coding downstream 153588 32915320 ~ 32946228 (-)
lysmd1 NA coding downstream 194343 32902016 ~ 32905473 (-)
ptpn23a ptpn23 coding downstream 696394 32376916 ~ 32403422 (-)
LOC120562214 NA coding downstream 935300 32161017 ~ 32164516 (-)
LOC120562448 NA coding upstream 13680 33115217 ~ 33130559 (-)
ctsk ctsk,LOC107086845,LOC106920373,LOC103156711,LOC106949137,LOC103477640 coding upstream 32573 33134110 ~ 33153043 (-)
LOC120563172 NA coding upstream 194713 33296250 ~ 33299540 (-)
atg5 atg5,LOC102785391 coding upstream 414157 33515694 ~ 33556965 (-)
LOC120561933 NA coding upstream 466321 33567858 ~ 33581386 (-)
G77910 NA non-coding downstream 205026 32867146 ~ 32894790 (-)
LOC120562114 NA non-coding downstream 281270 32784245 ~ 32818546 (-)
G77850 NA non-coding downstream 411185 32688412 ~ 32688631 (-)
G77847 NA non-coding downstream 633086 32466172 ~ 32466730 (-)
G77829 NA non-coding downstream 695178 32404292 ~ 32404638 (-)
G77959 NA non-coding upstream 30706 33132243 ~ 33132533 (-)
G77984 s100a1,LOC105028680,LOC106605324,LOC107587912,LOC107689908,LOC107663298,LOC107598020,LOC107717776 non-coding upstream 183376 33284913 ~ 33286592 (-)
G77994 NA non-coding upstream 358485 33460022 ~ 33460244 (-)
G78064 LOC103362578,LOC107379244 non-coding upstream 383771 33485308 ~ 33486895 (-)
G78061 NA non-coding upstream 464258 33565795 ~ 33588250 (-)
ensab ensa,LOC103369031,LOC100695493,LOC101487776,LOC102787866,LOC102291346,LOC102199757,LOC108243249 other downstream 66921 33022098 ~ 33032895 (-)
sema6e sema6c,LOC103360390,LOC104932808,LOC100704625 other downstream 454847 32480644 ~ 32644969 (-)
LOC120561540 LOC104957162,LOC106526711,LOC102237165 other downstream 664949 32425365 ~ 32434867 (-)
tbx20 tbx20 other downstream 1109451 31976484 ~ 31990365 (-)
LOC120562592 dgkb,LOC102796570 other downstream 1472935 31612436 ~ 31626881 (-)
LOC120561932 NA other upstream 488984 33590521 ~ 33602948 (-)
LOC120561752 NA other upstream 993714 34095251 ~ 34097590 (-)
G78245 NA other upstream 994106 34095643 ~ 34146296 (-)
LOC120561744 NA other upstream 1028001 34129538 ~ 34132432 (-)
LOC120561747 NA other upstream 1159989 34261526 ~ 34273652 (-)

Expression


Co-expression Network