G77986


Basic Information

Item Value
gene id G77986
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33296251 ~ 33299542 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104258
TGAGGAGATAGATCTGGCTATGCGAGACCACGGTGAACAAAGATACTTACGTCTATTTCAAGTTCAGTCTCTAACAGGTTCTTCAGCTCCGATTTGTTCAGCTTGTACTTGTCCCCTTCTTTTCCCGAGTAGGAGTGGAACACCTCGATGAGGATAGCCATAGCAGTTTTCAGTTGAGACATTTTCCCCAAAAAAGAGAAATCACTGCAGTTATCAGGTTGGCAAAGATGTGTGGAGGGGTTGTCGaagggcagagggtaaagtgtTTCGGTGAAGTTTTTACGTGCTGGCACACAGTAGATGCAAACGTTCTCCTGAACACTGACGCTGACAGCTGCTGGTGGAAGTGGCTTCAGCGCTCATCTTATCAGCTCTATATAGGCTCCTCTCCcctgtgtgcaaaaaaaaaaaaa
>TU104259
AAACAGGACGTGATCTTTATTTAGATGGAGGCAAAATGGCAAGAATATCTTGAGTTTGTTTGCAGTGatgtatatattacatatatattacGTCATTACATATAATATTATTACAAGTTGCTTCCCCAAAATAACATTCTTAGTATATAAATGTAAAGAAAGGGTTATTGATTTAATGTGAAATATTAGACTTAGTGTTTCTTAAATCTAATCAGGGTGTTCTTGCTCTCAATATTTTTGGAAGAACTCATTGAAGACCATGGTCATTGCAGCAACCATAGTGACATACTCCTGGAAGTCCACTTCACCGTCACCGTCTGCATCCAAGTCCCGCATCATATCCTTGATCTCGCGCCTTTCGCCGCCGTCTATTTCAAGTTCAGTCTCTAACAGGTTCTTCAGCTCCGATTTGTTCAGCTTGTACTTGTCCCCTTCTTTTCCCGAGTAGGAGTGGAACACCTCGATGAGGATAGCCATAGCAGTTTTCAGTTGAGACATTTTCCCCAAAAAAGAGAAATCACTGCAGTTATCAGGTTGGCAAAGATGTGTGGAGGGGTTGTCGaagggcagagggtaaagtgtTTCGGTGAAGTTTTTACGTGCTGGCACACAGTAGATGCAAACGTTCTCCTGAACACTGACGCTGACAGCTGCTGGTGGAAGTGGCTTCAGCGCTCATCTTATCAGCTCTATATAGGCTCCTCTCCcctgtgtgcaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104258 False 413 lncRNA 0.46 2 33298004 33299542
TU104259 True 729 lncRNA 0.41 3 33296251 33299542

Neighbor

gene id symbol gene type direction distance location
s100a1 s100a1,LOC105028680,LOC106605324,LOC107587912,LOC107689908,LOC107663298,LOC107598020,LOC108272706,LOC108441918 coding upstream 9905 33283047 ~ 33286346 (+)
tlr18 LOC103362575 coding upstream 17734 33263730 ~ 33278517 (+)
si:ch211-113g11.6 LOC103362574,LOC103388694,LOC108243248 coding upstream 35334 33206707 ~ 33260917 (+)
lingo4b LOC104947071,LOC108243198 coding upstream 95609 33175909 ~ 33200642 (+)
onecutl LOC106524064,LOC104923936,LOC108243192 coding upstream 200113 33087190 ~ 33096138 (+)
prdm1a prdm1,LOC103362578,LOC100706221 coding downstream 173630 33473172 ~ 33489674 (+)
dctn3 dctn3,LOC102785116 coding downstream 257709 33557251 ~ 33566277 (+)
nt5c3a nt5c3a coding downstream 306304 33605846 ~ 33628945 (+)
trnap-agg_3 NA coding downstream 326389 33625931 ~ 33626002 (+)
trnap-agg_4 NA coding downstream 331497 33631039 ~ 33631110 (+)
G77894 LOC103369035,LOC103362570 non-coding upstream 165378 33115275 ~ 33130873 (+)
G77903 NA non-coding upstream 184186 33111426 ~ 33112065 (+)
G77900 NA non-coding upstream 189680 33106209 ~ 33106571 (+)
G77899 NA non-coding upstream 190618 33101903 ~ 33105633 (+)
G77895 NA non-coding upstream 196703 33097628 ~ 33099548 (+)
G77991 NA non-coding downstream 25062 33324604 ~ 33325020 (+)
G77993 NA non-coding downstream 160480 33460022 ~ 33460235 (+)
G78001 NA non-coding downstream 193882 33493424 ~ 33493660 (+)
G78002 NA non-coding downstream 216167 33515709 ~ 33518515 (+)
G78000 NA non-coding downstream 264478 33564020 ~ 33588256 (+)
G77888 NA other upstream 194717 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 874779 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 1316342 31976318 ~ 31979909 (+)
G77447 NA other upstream 2160105 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 2564642 30687338 ~ 30731609 (+)
bmper bmper other downstream 526545 33826087 ~ 33879132 (+)
LOC120562157 NA other downstream 594818 33894360 ~ 33904285 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 691000 33990542 ~ 34042648 (+)
G78200 NA other downstream 1229813 34529355 ~ 34544379 (+)
LOC120562567 NA other downstream 1539615 34839157 ~ 34856532 (+)

Expression


Co-expression Network