bmper (bmper)


Basic Information

Item Value
gene id bmper
gene name bmper
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33826087 ~ 33879132 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104301
GGACAGTCGAGCATCCATATGCCAAACGGAGCGCACATTGAGACGAGTCTACTGGAAAAACGTCCCCTACACTGACTTATCGGCAGGCAGTGAGAAGCGTTTTGAAACTCTCCGGTTGTTAtaaatcagctgtgtgtgtattattatttttttcttccatcagAGCTTAAATTACCTCGGACACTTTGGTTTGGACTCTTCTGACTGCCGGAGTTGGGGAGAAATCCTTTTCCAAATCCCAAACCTCCTCTCAGGATCCCCATACCTGCAGGATTTGggactgttttttattttttttattttatttattttaatctttaaatgttttcatccATGGACTCCTGTTTTCCGCGCACAACACGAGCAGCCCCGCTGTCTCCTGCCCGTCGGCGcgtcttttgtcattttaatgtcGCTGTAATCACCGCGCGTCTGGCTGATTGTCGCTATGCATTTCAGCGCAATCTGACAAACTGaggagtttttttattttttttcttcttccttttatCTCCTGGCTGGAATAAAGACGATACGTCTGTGGgagaaacgtttttttttttttttctcttttggatTGATTTTGTTAATTTAATTCATCCGTTTTCACCAAAACTCTGACAGTTTTTCGTGAAGAGAAGAACCCCGAggatgttgctccgctgcttGAACCCTCCCTCCTGGTCCACCTGCAGGTTTTCATTCTGCTTTTTGTTGCTGCTCCAAACGCCCGGGCCCTCCTATCCACTAATTACAGGTACCGAGGCCAGCTGTGAGAACGAAGGAGAAGTCCTCCACATCCCCAACATCACCGACAACCCCTGCATCACCTGCGTATGTCTGGAGGGGAAGGCAGACTGCAAACAGGAGAAATGCCCACTGGTCTCTGAGGACTGTGCTCTGGTGGTGAAACAGACCGGAGCCTGCTGCGAGAGGTGTAAAGGT
>XM_039806161.1
agacagagttacaacacgcatggagatgagaagggtatgtatggacttatctaactctgggggatacggggaataagacaaagtcggcgtgttcctttaacgtTAACATGCAGCCTGAAGAAGATCCACAACCAAGGGGTCTGAGAATGAAATCAACCTTATTAATGAAATATTTAGTAATAAAATGAATCTACTAAGTATGTAAGCAAAGCCTTCAATTAgttctttattgtcattttgtttatttgttaacAGTTATTTGGATAATTTGATTGTATGTCTGTCTTTTTTCTACATGTGTGGATGTGAATGATCTGGTTGAGTGATGCCATTTTCTCCTGAATTATTCTCTGGTTTgattgttatttatatattattccAACAGCCGCAGGATAAATAACCTGCAGATTGTTACCAGTAGTCGTCATTTGCCCGTTGAAAGCTCCTTCCAATTTAAAGTTTACTTGATGTAAATGAACTCTTAACATTAATTTCTCCCTCAGAGTTCTGCGCTGGGTCGTCTTTCCTCTGCAGCGGTACTGAAGCTTTCAATCTTTCATCCCGTGCCGTCCAGCAAGAGGATTTGTACCCACTGTAGAAGTCATTTCACTTCGCTGACACTTCAGATACTCCAGTGTCAAATTCCACATTAAAGCAGaTGTTGAGCCTGCTGCAGGTATATTGATCCTATTCAAACACCAGATCACTAGTGAGGTCCCACACTGATGTTGGGTGATAAAGTCTGGATCCAATTCATCCTAAAGGCGTTGGATAATGTCAAGATTCCGGTCAAGTTCTTCCTCACCAAATTGGGAAACCATTTCTTCATGGAGTTGGCTTTGTGCACGGGGGGGCATCGTCACACAAAGTTGCTGGAGCATTAAGATCTTTCTTCATTGGAACTGAGCGGCCCAAACCAAAGAGCTTAAATTACCTCGGACACTTTGGTTTGGACTCTTCTGACTGCCGGAGTTGGGGAGAAATCCTTTTCCAAATCCCAAACCTCCTCTCAGGATCCCCATACCTGCAGGATTTGggactgttttttattttttttattttatttattttaatctttaaatgttttcatccATGGACTCCTGTTTTCCGCGCACAACACGAGCAGCCCCGCTGTCTCCTGCCCGTCGGCGcgtcttttgtcattttaatgtcGCTGTAATCACCGCGCGTCTGGCTGATTGTCGCTATGCATTTCAGCGCAATCTGACAAACTGaggagtttttttattttttttcttcttccttttatCTCCTGGCTGGAATAAAGACGATACGTCTGTGGgagaaacgtttttttttttttttctcttttggatTGATTTTGTTAATTTAATTCATCCGTTTTCACCAAAACTCTGACAGTTTTTCGTGAAGAGAAGAACCCCGAggatgttgctccgctgcttGAACCCTCCCTCCTGGTCCACCTGCAGGTTTTCATTCTGCTTTTTGTTGCTGCTCCAAACGCCCGGGCCCTCCTATCCACTAATTACAGGTACCGAGGCCAGCTGTGAGAACGAAGGAGAAGTCCTCCACATCCCCAACATCACCGACAACCCCTGCATCACCTGCGTATGTCTGGAGGGGAAGGCAGACTGCAAACAGGAGAAATGCCCACTGGTCTCTGAGGACTGTGCTCTGGTGGTGAAACAGACCGGAGCCTGCTGCGAGAGGTGTAAAGGTAAGACGGACAGGTGGACAGGTGGACAGGAAGGTGTTGTCACTGAGGCGGATGTACAGTGTGTGGTCCACTGCAAGAACCCCAAAATCCACCCCAAGAAGTGCTGCCCCACCTGCCCCAGTTGCATCTTTGAGGGTCGCCTGTACAAAGAGAAGGAGGAGTTCAGTCCTGAGGGCAAACCCTGCATCAAGTGCACCTGTACtGGAGGGCGGACTCTCTGCATGAGGGAGGTGTGTCCTGTCCTTTCCTGCCCCGCCCACCTCAGCCACACCCCGTCTGGACAGTGTTGTCCCAGATGTCTCGGTCAGAGGAAGGTGTTTGATCTGTATTCAGGAAGCTGTTTGTTCCACAGCGAAGTGTACGAGAACGGCACGTCCTTCATACACGACAActgcaccacctgcacctgcaAGGATTCCACGGTGGTGTGCAAGAAGCGGTGCTCTCAGCCAGGGAGTTGCCACGGCGACCAGTGCTGCGAGGAGTGTCTGTCCTACGTgaaggtggaggaggtgaagtACTGCAGAGTCCGGAACAAGATCTACAGGGAAGGAGATATGTGGTCGTCAGTGAACTGCACTCTCTGTGCCTGTGTTAAAGGAAACATCGAGTGTCGGCCCAAACAGTGTGTACCAATCACCAGCTGCCCCTCGaaCAAGATCTTGAACAGGACCGGCTGCTGTCCAGTTTGCACTGAAAAGCCGGGTGTATGTACAGTGTTTGGCGACCCTCACTACAACACCTTCGACGGCAGGACCTTTAACTTTCAGGGAACCTGTCAGTACGTACTGACACGGGACTGTGGCAGCGTTCCCTCTGGAGGACCGGGAAATAACATCAACAGCCCAGACTCCAGCTTCATGGTGCTGGTGAGGAACGACGCCCGGCGGACTCGTTCCTTCTCCTGGACTCAGTCTGTTGAGGTGAGACTGGGAGGTTTGATCCTCGGCCTCCACCAGCACCTGACGGTCCGGAGGAACGGCACCCGCATCGCCCTGCCCTACCACGGCCCCGGGGTGCACATCGACCTGGACGGATACCTGCTCAAACTCACCACCATCGCAGGTCTGGAGATCACGTGGGACGGGGACAGTTTCGTGGAGGTTGTGGCTGCCCCCCACCTGCGAGGACGTCTCTGCGGCCTCTGCGGCAACTACAATGGCCACAAGCGCGACGACACCATGGGAGGCGACGGCCAGTTCAAGTTCGACGTGGACGAGTTTGCCGAGTCGTGGCGAGTCGAGGGAAACGAGCTATGCTCCCAGCAGCACCCGCCTCGCCGGCCAACCTCCTTCCTGTGCCCTGGCAGCGTCAAAGTCAAGTTCCGCGCCCACCGGGAGTGCCAGAAGATAAAGTCGTGGGAGTTTCAGAAGTGCCACCGTGTGGTTGACTTCGCCCCTTTCTACAGGTCGTGTGTGACGGACATGTGTGAGTGTCCGGTCCATAAAAACTGCTACTGTGAGTCCTTCATCGCCTACAGCCGAGCCTGCGAGAGGGAGGGAGTGCCCGTCCTCTGGAAGGCCGACACCGCCTGCATGGCCACCCAGTGTAAACACGGCGCTGTGTACGACACCTGCGGCCCGGGCTGCACCAAAACCTGCGACAACTGGAACGAGATCGGACCGTGCCACAAGCCCTGCGTGGCCGGCTGCCACTGCCCCGCCAACCTGGTGCTGTTCCAGGGACGCTGCATCAAACCCACGGCCTGCCCCGGACGGTGACCCTTGTGACCCAGGTGGGAGGGAAGGGTGgcggggggaaggggggggaggTGGCTAGGTCAGAGACGGTCATTTATAATATCAGAATAAGGGGCCCAAAGAAGCCGGGAAGAGTTTGGTAGGACACAAAAAGGGTCTAAAAAAAAAGTCGACAGATCAGATGCGACAAGGTACTCACGGTCCATAGGTATCTGATGTAGAAGCACACGCTACGGCAATGGGAGGATGATCCGTGCCACCACATTCAGCCTCGGACTTCCTTGTGCCTCTTGTAATAAACACGTGCTGTCACGATACCAGTCACCGCCACCGGAGGCGCTAATTTCAAACTTGTGGATGAAGAACTGAACTCCCGAGAATAAATTTAGGGAGCCTATTTTGGAGATTTTACCGTctccaccctcctgaggaacgTTTGCCCACGCTGCCATGGACCCTCTGGAAACTATTTGGGCCAGTGGACTCCTGCTTGAGCCAACATGGCGCCCAAATGTCTCTCCCAAACACCCTGAAGTGGGAAACTGAGCATCTGCGTTTGGAATAAGGAGATTCAAAGCGGAGAAACCCTCTGATGCATCGTGTCAAAAGTGCCCTCGTAATCTCTGTTCAATCATTTCATACTGTAAGCTAGCCAGATTTATATGAAAGACAGACagcttttatattattattgttctaattattataataattattattatttgttgttgATGTTAATTTATATATCGGTCAAATGACATGTCGTAGCAAGAGCCAGAATCATGAACATAATTGCGTTATGAATGATTTAAAGGGAAACAAAAgctatttatgtatttgttgTGTTACTGTTTGAAGAGAAATGCCCAAATGTGACTCAGTTGTTGCACCATCGCAGGGAAAAAGTACTGTATTGTAATATGCTCCGTGTACAGGTTGTTGTGGTCCGTATCAAACTGAAGGTGTTCATCTAAGCATATGTTTCACTTGACGATAATTATTTAAGACCAGCAATATAATCTTTTATCGAAGTTCA

Function

symbol description
bmper Enables extracellular matrix binding activity. Acts upstream of or within several processes, including animal organ development; regulation of BMP signaling pathway; and regulation of angiogenesis. Located in extracellular matrix and extracellular space. Is expressed in several structures, including head; hematopoietic system; mesoderm; nervous system; and pectoral fin. Orthologous to human BMPER (BMP binding endothelial regulator).

NR:

description
BMP-binding endothelial regulator protein-like

GO: NA

KEGG:

id description
K24517 BMPER; BMP-binding endothelial regulator protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU104301 False 945 TUCP 0.46 3 33839076 33861112
XM_039806161.1 True 4438 mRNA 0.50 18 33826087 33879132

Neighbor

gene id symbol gene type direction distance location
bbs9 bbs9,LOC102784155 coding upstream 3258 33632641 ~ 33822829 (+)
trnap-agg_5 NA coding upstream 194374 33631642 ~ 33631713 (+)
trnap-agg_4 NA coding upstream 194977 33631039 ~ 33631110 (+)
nt5c3a nt5c3a coding upstream 197142 33605846 ~ 33628945 (+)
trnap-agg_3 NA coding upstream 200085 33625931 ~ 33626002 (+)
mettl6 mettl6 coding downstream 27258 33906390 ~ 33911214 (+)
LOC120562644 NA coding downstream 37867 33916999 ~ 33919175 (+)
LOC120562646 NA coding downstream 43446 33922578 ~ 33935943 (+)
LOC120562692 NA coding downstream 204963 34084095 ~ 34088746 (+)
LOC120561733 NA coding downstream 540775 34419907 ~ 34441093 (+)
G78000 NA non-coding upstream 237831 33564020 ~ 33588256 (+)
LOC120561935 NA non-coding upstream 237995 33583805 ~ 33588092 (+)
G78002 NA non-coding upstream 307572 33515709 ~ 33518515 (+)
G78001 NA non-coding upstream 332427 33493424 ~ 33493660 (+)
G77993 NA non-coding upstream 365852 33460022 ~ 33460235 (+)
G78052 NA non-coding downstream 43861 33922993 ~ 33923230 (+)
G78054 NA non-coding downstream 59127 33938259 ~ 33938468 (+)
G78055 NA non-coding downstream 71641 33950773 ~ 33951005 (+)
G78117 NA non-coding downstream 83662 33962794 ~ 33963092 (+)
LOC120561795 NA non-coding downstream 105717 33984849 ~ 33987987 (+)
G77888 NA other upstream 724553 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 1404615 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 1846178 31976318 ~ 31979909 (+)
G77447 NA other upstream 2689941 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 3094478 30687338 ~ 30731609 (+)
LOC120562157 NA other downstream 15228 33894360 ~ 33904285 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 111410 33990542 ~ 34042648 (+)
G78200 NA other downstream 650223 34529355 ~ 34544379 (+)
LOC120562567 NA other downstream 960025 34839157 ~ 34856532 (+)
G78594 NA other downstream 1526243 35405375 ~ 35408682 (+)

Expression


Co-expression Network