LOC120562157


Basic Information

Item Value
gene id LOC120562157
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33894360 ~ 33904285 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104327
TCGGTGAAGAGGCGTCGTTTGAATTTCAGTTCAttacgtgtttttgttgtgtgtgaggACTGCTTGTTCGGTTTCCAGTATTTTATAAAACATTGAACTCGGGGATATTGTTTAACATCACGGACAGACTGTATCTGGCTGCAGTAGTTCTCCTCCTGTGGTCCTGAGCTGTGTGTTGGAGGCGATGCGTCATGATGATTCATCTATTAGCCGTCGGAAGGGCAAAACCCCTCAACGCCGACCCCCGCAGCCGGCCCCAGGGCCCTCCGGTACAACATCCCGGTCCCCAAGACGGAGTGGAGCTTCAAGGCGGCCCCCCGCGTCTCCCAAGAAGAGAAGGTTTCGACCAGGGACCAGGGCCTTGATGGAGATCCGCAAGTACCAGAAGAGCACCGATCTTCTACTCAGGAAGGCACCCTTCTCTCGCCTGGTCCGTGAGGTGTGCCAGAGTTTTTCCCATGACGCTCTCCGATGGCAGGTCTACGCTCttctggccctgcaggaggCTGCAGAGGCGTTTCTTGTCATGCTGTTCTCCGATGCAAACCTGTGTGCGATCCACGCCAAGCGGGTCACGCTATTCCCCCGGGACATTCAGCTGGCCAGGAGGATCCGCGGGGTGGACAACATGTGAAAACAATACAGGACCAAGTGGACAAGCAAGCATCAGGAAGGACACTCATTTCATTGCGCTCTTTCCACTTCAGTCTGTTCTGAGACTATGATACTGCTTATAATGTGTTTAAACGGTATAACTGTTTTAAAaattttatgatttttatgCTACATTTTTTGAATTTTGGGTTACTAAATTCTTGGGAAAGGAAATAATTTGACTTGGCAGATTATCACTGGTTTTATGAAAAGGTAACAAGTTCAAGTTACCGACTTTTAACCGTCAGAAAATAATCCCTGTCAAGCAGTTGTATTTTTATACTTGAGTACTTATATTTGCATAATGTGTTAATTTTGATCCCTCAGTGTTGTATTGCTTTTGATATATAATTGATGTGTACATATTGTTCCACATTCATGTGAACTTACTTTGTTAATAAACCG
>XM_039805693.1
ATTGGATGAGTCGGTGAAGAGGCGTCGTTTGAATTTCAGTTCAttacgtgtttttgttgtgtgtgaggACTGCTTGTTCGGTTTCCAGTATTTTATAAAACATTGAACTCGGGGATATTGTTTAACATCACGGACAGACTGTATCTGGCTGCAGTAGTTCTCCTCCTGTGGTCCTGAGCTGTGTGTTGGAGGCGATGCGTCATGATGATTCATCTATTAGCCGTCGGAAGGGCAAAACCCCTCAACGCCGACCCCCGCAGCCGGCCCCAGGGCCCTCCGGTACAACATCCCGGTCCCCAAGACGGAGTGGAGCTTCAAGGCGGCCCCCCGCGTCTCCCAAGAAGAGAAGGTTTCGACCAGGGACCAGGGCCTTGATGGAGATCCGCAAGTACCAGAAGAGCACCGATCTTCTACTCAGGAAGGCACCCTTCTCTCGCCTGGTCCGTGAGGTGTGCCAGAGTTTTTCCCATGACGCTCTCCGATGGCAGGTCTACGCTCttctggccctgcaggaggCTGCAGAGGCGTTTCTTGTCATGCTGTTCTCCGATGCAAACCTGTGTGCGATCCACGCCAAGCGGGTCACGCTATTCCCCCGGGACATTCAGCTGGCCAGGAGGATCCGCGGGGTGGACAACATGTGAAAACAATACAGGACCAAGTGGACAAGCAAGCATCAGGAAGGACACTCATTTCATTGCGCTCTTTCCACTTCAGTCTGTTCTGAGACTATGATACTGCTTATAATGTGTTTAAACGGTATAACTGTTTTAAAaattttatgatttttatgCTACATTTTTTGAATTTTGGGTTACTAAATTCTTGGGAAAGGAAATAATTTGACTTGGCAGATTATCACTGGTTTTATGAAAAGGTAACAAGTTCAAGTTACCGACTTTTAACCGTCAGAAAATAATCCCTGTCAAGCAGTTGTATTTTTATACTTGAGTACTTATATTTGCATAATGTGTTAATTTTGATCCCTCAGTGTTGTATTGCTTTTGATATATAATTGATGTGTACATATTGTTCCACATTCATGTGAACTTACTTTGTTAATAAACCGCAAGATTAGTTTCTATTACGTA
>XM_039805694.1
TGATTGGATGAGTCGGTGAAGAGGCGTCGTTTGAATTTCAGTTCAttacgtgtttttgttgtgtgtgaggACTGCTTGTTCGGTTTCCAGTATTTTATAAAACATTGAACTCGGGGATATTGTTTAACATCACGGACTGTATCTGGCTGCAGTAGTTCTCCTCCTGTGGTCCTGAGCTGTGTGTTGGAGGCGATGCGTCATGATGATTCATCTATTAGCCGTCGGAAGGGCAAAACCCCTCAACGCCGACCCCCGCAGCCGGCCCCAGGGCCCTCCGGTACAACATCCCGGTCCCCAAGACGGAGTGGAGCTTCAAGGCGGCCCCCCGCGTCTCCCAAGAAGAGAAGGTTTCGACCAGGGACCAGGGCCTTGATGGAGATCCGCAAGTACCAGAAGAGCACCGATCTTCTACTCAGGAAGGCACCCTTCTCTCGCCTGGTCCGTGAGGTGTGCCAGAGTTTTTCCCATGACGCTCTCCGATGGCAGGTCTACGCTCttctggccctgcaggaggCTGCAGAGGCGTTTCTTGTCATGCTGTTCTCCGATGCAAACCTGTGTGCGATCCACGCCAAGCGGGTCACGCTATTCCCCCGGGACATTCAGCTGGCCAGGAGGATCCGCGGGGTGGACAACATGTGAAAACAATACAGGACCAAGTGGACAAGCAAGCATCAGGAAGGACACTCATTTCATTGCGCTCTTTCCACTTCAGTCTGTTCTGAGACTATGATACTGCTTATAATGTGTTTAAACGGTATAACTGTTTTAAAaattttatgatttttatgCTACATTTTTTGAATTTTGGGTTACTAAATTCTTGGGAAAGGAAATAATTTGACTTGGCAGATTATCACTGGTTTTATGAAAAGGTAACAAGTTCAAGTTACCGACTTTTAACCGTCAGAAAATAATCCCTGTCAAGCAGTTGTATTTTTATACTTGAGTACTTATATTTGCATAATGTGTTAATTTTGATCCCTCAGTGTTGTATTGCTTTTGATATATAATTGATGTGTACATATTGTTCCACATTCATGTGAACTTACTTTGTTAATAAACCGCAAGATTAGTTTCTATTACGTA

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU104327 False 1059 TUCP 0.46 5 33894372 33904263
XM_039805693.1 True 1091 mRNA 0.46 5 33894362 33904285
XM_039805694.1 False 1089 mRNA 0.46 5 33894360 33904285

Neighbor

gene id symbol gene type direction distance location
bbs9 bbs9,LOC102784155 coding upstream 71531 33632641 ~ 33822829 (+)
trnap-agg_5 NA coding upstream 262647 33631642 ~ 33631713 (+)
trnap-agg_4 NA coding upstream 263250 33631039 ~ 33631110 (+)
nt5c3a nt5c3a coding upstream 265415 33605846 ~ 33628945 (+)
mettl6 mettl6 coding downstream 2105 33906390 ~ 33911214 (+)
LOC120562644 NA coding downstream 12714 33916999 ~ 33919175 (+)
LOC120562646 NA coding downstream 18293 33922578 ~ 33935943 (+)
LOC120562692 NA coding downstream 179810 34084095 ~ 34088746 (+)
LOC120561733 NA coding downstream 515622 34419907 ~ 34441093 (+)
G78000 NA non-coding upstream 306104 33564020 ~ 33588256 (+)
LOC120561935 NA non-coding upstream 306268 33583805 ~ 33588092 (+)
G78002 NA non-coding upstream 375845 33515709 ~ 33518515 (+)
G78001 NA non-coding upstream 400700 33493424 ~ 33493660 (+)
G77993 NA non-coding upstream 434125 33460022 ~ 33460235 (+)
G78052 NA non-coding downstream 18708 33922993 ~ 33923230 (+)
G78054 NA non-coding downstream 33974 33938259 ~ 33938468 (+)
G78055 NA non-coding downstream 46488 33950773 ~ 33951005 (+)
G78117 NA non-coding downstream 58509 33962794 ~ 33963092 (+)
LOC120561795 NA non-coding downstream 80564 33984849 ~ 33987987 (+)
bmper bmper other upstream 15228 33826087 ~ 33879132 (+)
G77888 NA other upstream 792826 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 1472888 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 1914451 31976318 ~ 31979909 (+)
G77447 NA other upstream 2758214 31134829 ~ 31136146 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 86257 33990542 ~ 34042648 (+)
G78200 NA other downstream 625070 34529355 ~ 34544379 (+)
LOC120562567 NA other downstream 934872 34839157 ~ 34856532 (+)
G78594 NA other downstream 1501090 35405375 ~ 35408682 (+)
LOC120562275 NA other downstream 1839010 35743295 ~ 35773988 (+)

Expression


Co-expression Network