G78052



Basic Information


Item Value
gene id G78052
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33922993 ~ 33923230 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU104334
gcgacttacaatttcTATATATGCCAGAGGTTGCAcgtctctggagcaactaggggttaagtgtcttgctcagggacacattggttgatgtatcgcagtgggaattgaacccaagtctcccacaccaaaggcatgtgtcatatcactgtgccatcaccaccATTATATTATGGTATTCAAAACATTGTATCATTATGTAAAGACACCTGAAAGAAAGATATTGGGATGTATGCCGTCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU104334 True 238 lncRNA 0.42 1 33922993 33923230

Neighbor


gene id symbol gene type direction distance location
LOC120562644 NA coding upstream 3818 33916999 ~ 33919175 (+)
mettl6 mettl6 coding upstream 11779 33906390 ~ 33911214 (+)
bbs9 bbs9,LOC102784155 coding upstream 100164 33632641 ~ 33822829 (+)
trnap-agg_5 NA coding upstream 291280 33631642 ~ 33631713 (+)
trnap-agg_4 NA coding upstream 291883 33631039 ~ 33631110 (+)
LOC120562692 NA coding downstream 160865 34084095 ~ 34088746 (+)
LOC120561733 NA coding downstream 496677 34419907 ~ 34441093 (+)
nes NA coding downstream 686680 34609910 ~ 34622583 (+)
hapln2 hapln2,LOC102779935 coding downstream 1028822 34952052 ~ 34964798 (+)
rrnad1 rrnad1 coding downstream 1119991 35043221 ~ 35058363 (+)
G78000 NA non-coding upstream 334737 33564020 ~ 33588256 (+)
LOC120561935 NA non-coding upstream 334901 33583805 ~ 33588092 (+)
G78002 NA non-coding upstream 404478 33515709 ~ 33518515 (+)
G78001 NA non-coding upstream 429333 33493424 ~ 33493660 (+)
G77993 NA non-coding upstream 462758 33460022 ~ 33460235 (+)
G78054 NA non-coding downstream 15029 33938259 ~ 33938468 (+)
G78055 NA non-coding downstream 27543 33950773 ~ 33951005 (+)
G78117 NA non-coding downstream 39564 33962794 ~ 33963092 (+)
LOC120561795 NA non-coding downstream 61619 33984849 ~ 33987987 (+)
G78134 NA non-coding downstream 125210 34048440 ~ 34053736 (+)
LOC120562157 NA other upstream 18708 33894360 ~ 33904285 (+)
bmper bmper other upstream 43861 33826087 ~ 33879132 (+)
G77888 NA other upstream 821459 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 1501521 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 1943084 31976318 ~ 31979909 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 67312 33990542 ~ 34042648 (+)
G78200 NA other downstream 606125 34529355 ~ 34544379 (+)
LOC120562567 NA other downstream 915927 34839157 ~ 34856532 (+)
G78594 NA other downstream 1482145 35405375 ~ 35408682 (+)
LOC120562275 NA other downstream 1820065 35743295 ~ 35773988 (+)

Expression



Co-expression Network