XLOC_004622 (ankrd22)


Basic Information

Item Value
gene id XLOC_004622
gene name ankrd22
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 17154655 ~ 17158635 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009158
TCGAGTTCGACGGGAAATGAGTCTATCGTCTCTCGTAGCGGATGAATCCACCGTCCCCTACACACCTGAACTGAACTGATTGCGTCATTATAGCTTATGCGTCATCGTTACGCCCTCAACCTTATCACCTGAATCACTGGTACCGCTCGCAGCAGGTACAAAGCAAATTAGCGAAGGGCTGTTAGTTTTATATCTTCAAACTTCAGATAAAGGATTTGTAAGTTTCGTTTTGCTTCAGGGACAGAGGAAGACAAATGGGGATCTTGTACTCAGAGCCCATGTGTCAGGCAGCTTATGATGATGACATCCACAAACTGAAAGAACTCATCTCAGCTGATCCCAGGAACATAAATGCTCAAGATGAAGGAACGGGAGACACACCGATCATAGCTGCCTGTAGACGGGGCAACCTCAGGATTGTAAAATACCTGCTAGATAGCAATGCAAATGTGTCCATAAGGAATAAGAAACAAAGGACTTGTTTGCACTATGCTACAAGAAGAACCTTTTCCTTCTTGGACTACCTGATGATTGCCATTTTAATGCCTATTTTGCTCATTGGTTTTCTTATATTGGAAGAGAAGCAAAGAAAAAATGTGAAGTTGATGGAGTTTTTGTTGGCCACTAAAGTGGATGTAAATGCTGTAGACTATAAGGGGAACACTGGACTTCACTATGCGTGCCAAAGAAAAAGTCAAAGGATTATTCCATTGTTACTGCAGAGGAATGCAGATGTTTCAATACAGAACAAAAATCGGGAAACTCCACTAGATATTGCACAGAAACACAAATTCCtaaaaattgtttcaatgttaACAAAGTCAATGTGAGTATTAATGGAGCACTGGGGTCCTGCACAATTCACCAGATGAGTTTTAGTTTTGATGtgcaccaaatattttttttctgcgcaacaaatattgttacatgTGATGTTCTGAAACTACATTTTCTCTGATGAAAATGCTGTATGTAAACATTTGATTTACTGATTTGTTGAGACTTTTCAGACATATCGTGGTTTGTTTTAATGTTCAAGTTTGCTTTTAtcactgtacagtataaaatgtatttccaaaaaaaaaaaaaaaaagctcactaCTTTC

Function

symbol description
ankrd22 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human ANKRD22 (ankyrin repeat domain 22).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1120 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human ANKRD22 (ankyrin repeat domain 22).

Ensembl:

ensembl_id ENSDARG00000002298

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009158 True 1106 mRNA 0.39 6 17154655 17158635

Neighbor

gene id symbol gene type direction distance location
XLOC_004621 acta2 coding upstream 38174 17100021 ~ 17116481 (+)
XLOC_004620 ch25h coding upstream 110781 17042754 ~ 17043874 (+)
XLOC_004619 slc16a12b coding upstream 167687 16967715 ~ 16986968 (+)
XLOC_004617 pank1b coding upstream 189815 16953415 ~ 16964840 (+)
XLOC_004618 dre-mir-107a coding upstream 193874 16960693 ~ 16960781 (+)
XLOC_004623 rnls coding downstream 42887 17201522 ~ 17323341 (+)
XLOC_004624 AL731788.1 coding downstream 186915 17345550 ~ 17345667 (+)
XLOC_004625 NA coding downstream 265796 17424431 ~ 17427380 (+)
XLOC_004626 atad1b coding downstream 278269 17436904 ~ 17456083 (+)
XLOC_004627 cyth3a coding downstream 345924 17504559 ~ 17562703 (+)
XLOC_004615 NA non-coding upstream 279952 16742395 ~ 16874703 (+)
XLOC_004614 NA non-coding upstream 569601 16583373 ~ 16585054 (+)
XLOC_004613 NA non-coding upstream 584611 16567854 ~ 16570044 (+)
XLOC_004612 NA non-coding upstream 662849 16490198 ~ 16491806 (+)
XLOC_004634 BX005075.1 non-coding downstream 967023 18125658 ~ 18125774 (+)
XLOC_004635 NA non-coding downstream 1051236 18209871 ~ 18228004 (+)
XLOC_004644 AL772266.2 non-coding downstream 1440215 18598850 ~ 18598964 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000063_00861534_00863874 ANKRD22 coding CI01000063 null 860979 ~ 864105 (+)