G78054


Basic Information

Item Value
gene id G78054
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33938259 ~ 33938468 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104336
GGTTGTTGTTTCTGATAGCGAACAGAGTTATGAACGGaggagagaacaacgtttgcattgcataagaacctgatggatgggaatgattgttccaggtattagtcaaaccgtcaggcgtaaccagggaaacggagttattgtttggataaactttagatttcgattgtaaaactaattaaaatatgaactaatgttttaaaaatatgttat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104336 True 210 lncRNA 0.35 1 33938259 33938468

Neighbor

gene id symbol gene type direction distance location
LOC120562646 NA coding upstream 2316 33922578 ~ 33935943 (+)
LOC120562644 NA coding upstream 19084 33916999 ~ 33919175 (+)
mettl6 mettl6 coding upstream 27045 33906390 ~ 33911214 (+)
bbs9 bbs9,LOC102784155 coding upstream 115430 33632641 ~ 33822829 (+)
trnap-agg_5 NA coding upstream 306546 33631642 ~ 33631713 (+)
LOC120562692 NA coding downstream 145627 34084095 ~ 34088746 (+)
LOC120561733 NA coding downstream 481439 34419907 ~ 34441093 (+)
nes NA coding downstream 671442 34609910 ~ 34622583 (+)
hapln2 hapln2,LOC102779935 coding downstream 1013584 34952052 ~ 34964798 (+)
rrnad1 rrnad1 coding downstream 1104753 35043221 ~ 35058363 (+)
G78052 NA non-coding upstream 15029 33922993 ~ 33923230 (+)
G78000 NA non-coding upstream 350003 33564020 ~ 33588256 (+)
LOC120561935 NA non-coding upstream 350167 33583805 ~ 33588092 (+)
G78002 NA non-coding upstream 419744 33515709 ~ 33518515 (+)
G78001 NA non-coding upstream 444599 33493424 ~ 33493660 (+)
G78055 NA non-coding downstream 12305 33950773 ~ 33951005 (+)
G78117 NA non-coding downstream 24326 33962794 ~ 33963092 (+)
LOC120561795 NA non-coding downstream 46381 33984849 ~ 33987987 (+)
G78134 NA non-coding downstream 109972 34048440 ~ 34053736 (+)
LOC120561759 NA non-coding downstream 310561 34249029 ~ 34251208 (+)
LOC120562157 NA other upstream 33974 33894360 ~ 33904285 (+)
bmper bmper other upstream 59127 33826087 ~ 33879132 (+)
G77888 NA other upstream 836725 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 1516787 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 1958350 31976318 ~ 31979909 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 52074 33990542 ~ 34042648 (+)
G78200 NA other downstream 590887 34529355 ~ 34544379 (+)
LOC120562567 NA other downstream 900689 34839157 ~ 34856532 (+)
G78594 NA other downstream 1466907 35405375 ~ 35408682 (+)
LOC120562275 NA other downstream 1804827 35743295 ~ 35773988 (+)

Expression


Co-expression Network