G78064 (LOC103362578,LOC107379244)


Basic Information

Item Value
gene id G78064
gene name LOC103362578,LOC107379244
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33485308 ~ 33486895 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104349
CCGGTAAAGAAATATTCTCTGATATATCTATGTCACTTGCTTTTGTCTGTGTAATGTGTTTCCTGTAAAGCACTCCTTGCTCTGTAAAGTGCCGTAAACTTGCTCTGCGACCTAATTATTGAACTGCAGTCCACACATTACAAAGGACCGGAATGATAATAAGGCGGTAAATCAAACAAGCAGATGTGACGTTGAAAGACAAACGCGGATCAACTCGGCAGCGCCGCGAGCCTCACCTTCAGGTTCGACAGCTGTCCGAAGGTCTTGCTGCACACGTTGCACTCGTACTTGATTTTGCCGTTCTGCTTCTTCAGCGGGTACGGCAGCGCCTTGTAGCCCGCTGAGCCCGGGCCGCGCTTCACCTTGGTCAGGTTGACGGCCTCCTCATCAGAGCAATGCTCGCCGGCGTTGCCCAGCAGGGCTGATGTAGGCTTGGTGGGCGCCCGCTCGCTGAGAGGTGCTGTGCCTGCTGTTGGGGAGCTGCTGGGGGGAGCGTGGGTGGGTCTGTGTGGGTGAGGGTGCCCCATGTAAGGGTGGTGAGGCCCTGCTTTGTCCTTCAGAGAGGTGGCGGCTGAGAAGGCACTGGTAGGCCTTGGGAGGAGGAAGTCTCTGTGGGCAGAGATGGGGGAGGGGTGGACGTGGTCAGACATCAGGAAGCGCCTCCCTGCTGTGTCGGAAGGCAGGAGGGGCACGTGAGGGGGCAGGAGGCTGCTGTAGAGAGGGTACATCCTTGGAAAGATCCCTCCGACGGTGGGGACGCCGCCTCCGGGCAGAGGGTAGTGATGGGGGAGGATGTAGCGTGAGTAGGGGGCTCCTGGAGGGTAGAAGGACGAGGGGAGGGGGGTAGATGGCGGGGAGTAACCGGGGTAAGAACCCAGCCCGGCCGGGTAGAAAGAAGCTGACGATGGTGCCGGACCCAAGGGGCTCCCCTGGGGGCTGCTGTCGGGGCTGCTCCTTGCCGACGGGCTGGGCGTGGCTGAAGACTGGTTGCCAGGGGAACGTGTCGCTGGGTAACCAAGCTGGGCGGATTTGTGGCCGAGGAAGTCTTCAGTGATGTGAGGGTGGGGCCTGAGAGCTGGGTAGAGCGCGCGAGGGTACAGGAGGCGCTCGGGGCTGTCTGCGCAGCGCGGGCGAGTGGGAAGCGGCCGGCTGGGCTCCCTCTTTATgggcgaggaggaggaggaggaggaggaggtgctgTTGGTGCCACGCAGAATGGAGAGGACACTGTGTTCCCTCTTGGGCGGCGTAGGGGTGACTGCGACCGGGGACGGGCTGCAGGCTTCGACCAAACGCTCCTCACTGCTCACCTGCTGCTGCTTGACCTCCAAGAGAGACTGTtctgtagagacagagagaaaaagaggtcAGCGGGAGTTCACCAGATCAAGATAGGATCCTCATGGTTCCCCTTGGGGCCCGATAATAAATAATTCCAATTTTTGCCATTTAAAGTAATAATCATGACTTCTATTTACCAACACAAATACTCAAAATTCCTTTGAAACGGCAGAGATTGACTTCTCCAAGTTCTCTACAgcaaagatgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtg

Function

NR:

description
PREDICTED: PR domain zinc finger protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104349 True 1588 lncRNA 0.58 1 33485308 33486895

Neighbor

gene id symbol gene type direction distance location
LOC120563172 NA coding downstream 185768 33296250 ~ 33299540 (-)
ctsk ctsk,LOC107086845,LOC106920373,LOC103156711,LOC106949137,LOC103477640 coding downstream 332265 33134110 ~ 33153043 (-)
LOC120562448 NA coding downstream 354749 33115217 ~ 33130559 (-)
mcl1b NA coding downstream 464233 33018705 ~ 33021075 (-)
tmod4 tmod4,LOC102789303 coding downstream 539080 32915320 ~ 32946228 (-)
atg5 atg5,LOC102785391 coding upstream 28799 33515694 ~ 33556965 (-)
LOC120561933 NA coding upstream 80963 33567858 ~ 33581386 (-)
eaf1 eaf1 coding upstream 392878 33879773 ~ 33893809 (-)
capn7 capn7 coding upstream 561543 34048438 ~ 34081401 (-)
LOC120561745 NA coding upstream 657279 34144174 ~ 34146909 (-)
G77994 NA non-coding downstream 25064 33460022 ~ 33460244 (-)
G77984 s100a1,LOC105028680,LOC106605324,LOC107587912,LOC107689908,LOC107663298,LOC107598020,LOC107717776 non-coding downstream 198716 33284913 ~ 33286592 (-)
G77959 NA non-coding downstream 352775 33132243 ~ 33132533 (-)
G77949 NA non-coding downstream 383771 33099816 ~ 33101537 (-)
G77910 NA non-coding downstream 590518 32867146 ~ 32894790 (-)
G78061 NA non-coding upstream 78900 33565795 ~ 33588250 (-)
G78084 NA non-coding upstream 233786 33720681 ~ 33720916 (-)
G78094 NA non-coding upstream 250290 33737185 ~ 33871792 (-)
G78101 NA non-coding upstream 337800 33824695 ~ 33859217 (-)
G78097 NA non-coding upstream 394110 33881005 ~ 33884726 (-)
ensab ensa,LOC103369031,LOC100695493,LOC101487776,LOC102787866,LOC102291346,LOC102199757,LOC108243249 other downstream 452413 33022098 ~ 33032895 (-)
sema6e sema6c,LOC103360390,LOC104932808,LOC100704625 other downstream 840339 32480644 ~ 32644969 (-)
LOC120561540 LOC104957162,LOC106526711,LOC102237165 other downstream 1050441 32425365 ~ 32434867 (-)
tbx20 tbx20 other downstream 1494943 31976484 ~ 31990365 (-)
LOC120562592 dgkb,LOC102796570 other downstream 1858427 31612436 ~ 31626881 (-)
LOC120561932 NA other upstream 103626 33590521 ~ 33602948 (-)
LOC120561752 NA other upstream 608356 34095251 ~ 34097590 (-)
G78245 NA other upstream 608748 34095643 ~ 34146296 (-)
LOC120561744 NA other upstream 642643 34129538 ~ 34132432 (-)
LOC120561747 NA other upstream 774631 34261526 ~ 34273652 (-)

Expression


Co-expression Network