G78118


Basic Information

Item Value
gene id G78118
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33962752 ~ 33963241 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104417
aaaacaatgtttaatgtagcctgcagctaaatctaatcaagtaactacactaattagtatttgtctggctcacaccgtctgtagcttctaaagaattgattaggtcatggctgttatttagcatactgtaggagactcattgtccccaTAGGAAAGGTAACTTTTGTCTCTTTTAGGGGAGCCATCCCCAGACGTGATTAAGACAAAGAACGAGTATTGCTGTAGTTTGGAAACAATTGACACGTCTCGGTAAGATCCTGTCACCGGGGGTAGCCTCAAGACACTGATTGGGAACattcaccttttcttttgagagacatctgaccaatagggaaAGATTTAATTTGAAGAACCACGCAGGTACAGGAATAAATGTGGGAGCAGGAGAATGTATCAGgacttcaatctgtgacccgaAAGGGAAGCAGTTggagtccgctgtttacagtgtattgtttgtcatgtcgcatggctgctaacttgtgtcccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104417 True 490 lncRNA 0.43 1 33962752 33963241

Neighbor

gene id symbol gene type direction distance location
eaf1 eaf1 coding downstream 68943 33879773 ~ 33893809 (-)
LOC120561933 NA coding downstream 381366 33567858 ~ 33581386 (-)
atg5 atg5,LOC102785391 coding downstream 405787 33515694 ~ 33556965 (-)
LOC120563172 NA coding downstream 663212 33296250 ~ 33299540 (-)
ctsk ctsk,LOC107086845,LOC106920373,LOC103156711,LOC106949137,LOC103477640 coding downstream 809709 33134110 ~ 33153043 (-)
capn7 capn7 coding upstream 85197 34048438 ~ 34081401 (-)
LOC120561745 NA coding upstream 180933 34144174 ~ 34146909 (-)
LOC120561746 NA coding upstream 200554 34163795 ~ 34172230 (-)
LOC120561751 NA coding upstream 209527 34172768 ~ 34188410 (-)
LOC120561742 NA coding upstream 249091 34212332 ~ 34219024 (-)
G78110 mettl6 non-coding downstream 53867 33906420 ~ 33908885 (-)
G78097 NA non-coding downstream 78026 33881005 ~ 33884726 (-)
G78094 NA non-coding downstream 90960 33737185 ~ 33871792 (-)
G78101 NA non-coding downstream 103535 33824695 ~ 33859217 (-)
G78084 NA non-coding downstream 241836 33720681 ~ 33720916 (-)
LOC120561768 NA non-coding upstream 271973 34235214 ~ 34235852 (-)
LOC120561761 NA non-coding upstream 293418 34256659 ~ 34257473 (-)
LOC120561757 NA non-coding upstream 310998 34274239 ~ 34276133 (-)
LOC120561763 NA non-coding upstream 362158 34325399 ~ 34328950 (-)
G78298 NA non-coding upstream 429710 34392951 ~ 34393367 (-)
LOC120561932 NA other downstream 359804 33590521 ~ 33602948 (-)
ensab ensa,LOC103369031,LOC100695493,LOC101487776,LOC102787866,LOC102291346,LOC102199757,LOC108243249 other downstream 929857 33022098 ~ 33032895 (-)
sema6e sema6c,LOC103360390,LOC104932808,LOC100704625 other downstream 1317783 32480644 ~ 32644969 (-)
LOC120561540 LOC104957162,LOC106526711,LOC102237165 other downstream 1527885 32425365 ~ 32434867 (-)
tbx20 tbx20 other downstream 1972387 31976484 ~ 31990365 (-)
LOC120561752 NA other upstream 132010 34095251 ~ 34097590 (-)
G78245 NA other upstream 132402 34095643 ~ 34146296 (-)
LOC120561744 NA other upstream 166297 34129538 ~ 34132432 (-)
LOC120561747 NA other upstream 298285 34261526 ~ 34273652 (-)
LOC120561737 NA other upstream 353571 34316812 ~ 34323015 (-)

Expression


Co-expression Network