sh3bp5b (sh3bp5,LOC102783023)


Basic Information

Item Value
gene id sh3bp5b
gene name sh3bp5,LOC102783023
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33990542 ~ 34042648 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104420
GGGAGAGAGCTGAGCGGTGATAGACGCTGTTGCTCGACTCCTGGCGGATACAAGCAGAGATGGTCCTCATCCAAAAACacttcttttaaaataaattaacactAGAGACATAAAGTAAGGCTCGTGAATCCGACGTGTGGTGACCCAGCTGAGACAACCGAGTCCGTGGTCTCTGTGAGTCCCGTAGTAACGTCTCTTTGTTCGGTTTGTTGACGATATATCTGCCCTTCACCTTCAACATGGATAATTCAGAGAAGGAGCTCAGGACGGACGACGACGAGGCAGAATATGAAGACGAGGAAGTGGACCCCAGAGTCCAGGGCGAGCTGGAGAAACTCAACCAGTCCACTGACGACATCAACAGATGTGAGACGGAGCTGGAGgaCGCGAGGCAAAAGTTCCGCTCGGTTCTGGTTGAGGCTACGGTGAAGCTGGACGAACTTGTGAAGAAGATCGGCAAGGCTGTGGAGGAGTCCAAGCCTTACTGGGAGGCCCGCAGGTTGGCCAGACAGGCCCAGCTGGAGGCCCAGAAGGCCACCCAGGACTTCCAGAGAGCCACGGAGGTCCTGCGGGCGGCCAAGGAGACAATCTCCCTGGCCGAGCAGAGGCTCCTGGAGGAGGACAGCCGGCAGTTTGATTCCGCTTGGCAGGAGATGTTGAACCACGCTACCCAGCGGGTGATGGAGGCGGAGCACACAAAGACGAGAAGCGAGCTGGTGCACAAGGAGACGGCGGCCAAATATACGGCAGCAATCGGCCGCATGAAGCAGCTGGAGAAAAAACTCAAACGCACCATCAACAAGTCCAAGCCCTACTTTGAGATGAAGGCGAAGTACTATCTGCAGCTGGAGaaCCTGAAGAAGAATGTGGACGAGCGGCAGGCCAAGCTGTCTCAGGCCAAAGGCGAGTATAAGACGGCGCTCAGGAACCTGGAGATGATCTCCGACGAGATCCACGAGCGACGGCGGAGCTCCACGATGGGCACCCGGGGGCGCGGCGTGGGCGCCGAGGGGGACAGTGTTTCCGGGGACGACATCTCCAGTTTTAAGATGGAGTCAGA
>TU104431
CGCCCTccactcccccctcccccccgtcTCCTCTTTCGAGGCCCTGCAGCCTGGACCTGCCCAGCACCGTGTCGCTGTCCGACTTCGGCCTCATCTCGCCGGTGCTCGGGCCTCGCAGCGAGTGCAGCGGAGCGTCGTCGCCAGAATGTGACCTGGAGAGAGGTGACCGGGCAGAAGGTGCAGAAGGGGATCTGGACAACGCCCCGgcctccaacaacaacaacaactccacTCCAAGCACAAAGAAGAGCTTCAGCCTGGAGGCCCGCTTCAGCTTCCTCAACCTGCGCCGCCCCCGCACCGACAAAAACACGGACAACTGTTCCCAGAAGGCCGCAGCCGGGCAGACTCTGGTCTTGGTCAAAGGTGTCTAAGGACCAAAAAGAGGATTTTGACCCAAACTTTCTGATAAACAGCTGTTTATATAAGCTACCTGGCACAACTGCACTCCATTTAGAAACTCCACAGTCAGAGAGAGACTTTGAATGTCACAGTTGGTGAATATAAAGTTTCCTGTACATCTTGGCAAGTGTTGTTACTCCCATTTCCTTTATGGACATTGCACCTTTTGGACTCTCATGCCTGAGAAATAAAGACTGAATGCTGTTGTGTTTCAAATGTGTCGGTTAAGGGGGATGGAATAAAAAGATGGTTAGAAATGATTCATGTTcatatttgtttgttatttttccaCTAAAAGCTGGAAAGCCTTCTGTCGCAAAAGTACATTAGCTGTCTGAGAATGGCATCTATGAAATAAATGGGTTGGTGTAACTGTTTATCAAAATTAAGAATTCATTACTGTTAAATAGCACTTGGCATACTGTAAACCATGCAGAGGTGATGTTAAAGGAATCTTATGTGAAAATGTTCAATAAATAACTGGTCTCTTAACCTGCTGTACACTCCTGTATTTGATATGTAATGGTGTATTTTCTGAAgttatgtatgtaaatgttcaGGTTTAGGCACTGTGGACCCtccaatgtccaaaaaaagctgtttatttttcatataaagTATAATTTAATTTTTGCCACCATGATGATTGTTTAAAATGTACGTCTATCTGTTGCAAACACAGCAAAGTTATTGATATATACACAAAAAATGTGGCCTTTCGATAAGTCCCATTGCAGGTAAAAATAGAAATAGCTGCATGTAATTACTTACGACCAAATGTAAAGAATGACTTAAGTGTTTCACAGCCCTCTATAGTTTAAAGCGAAACGATTgcattgtttatttgtttaggtGAGGAGGAATAATGTAACAAAATGTTCCCTGAAGTTTACCATCAAAAGACCTAAACCAACAAAGAGTCAGCGCATCTCTCGACTTCCCTACTCCAAGCCCATTGGGTCCCGCGGAAGATGTACATGAAAGGTTGAGATTGTACAAAATGATGAACATCTGCCTAATCCGCATTATAGTAACAATTGTGAGGAAAGGTTCTTTCTTCAGtctgtgtattatgtgtgtgaacAAAATGTGATATCTGCATATTTCCATATATCTGTCACTTTTTGATGTGGAATTTAGGACAAGAACCCCCCCCAACCAGCCTGCCCTCTCATAACTATGTGTGCAGTTGGTGTTTAGTCCTCTGCATCGTCTCTCAGCAGCTAACGTGCCTGTTTTTCAGATGAAGAGTTAAATAAACG
>XM_039806163.1
CCGGGCTGAAGCACAGCTCTGGACATTTCAATACCGGCCTCAGTGTCAGTGGAGGGAGAGAGCTGAGCGGTGATAGACGCTGTTGCTCGACTCCTGGCGGATACAAGCAGAGATGGTCCTCATCCAAAAACacttcttttaaaataaattaacactAGAGACATAAAGTAAGGCTCGTGAATCCGACGTGTGGTGACCCAGCTGAGACAACCGAGTCCGTGGTCTCTGTGAGTCCCGTAGTAACGTCTCTTTGTTCGGTTTGTTGACGATATATCTGCCCTTCACCTTCAACATGGATAATTCAGAGAAGGAGCTCAGGACGGACGACGACGAGGCAGAATATGAAGACGAGGAAGTGGACCCCAGAGTCCAGGGCGAGCTGGAGAAACTCAACCAGTCCACTGACGACATCAACAGATGTGAGACGGAGCTGGAGgaCGCGAGGCAAAAGTTCCGCTCGGTTCTGGTTGAGGCTACGGTGAAGCTGGACGAACTTGTGAAGAAGATCGGCAAGGCTGTGGAGGAGTCCAAGCCTTACTGGGAGGCCCGCAGGTTGGCCAGACAGGCCCAGCTGGAGGCCCAGAAGGCCACCCAGGACTTCCAGAGAGCCACGGAGGTCCTGCGGGCGGCCAAGGAGACAATCTCCCTGGCCGAGCAGAGGCTCCTGGAGGAGGACAGCCGGCAGTTTGATTCCGCTTGGCAGGAGATGTTGAACCACGCTACCCAGCGGGTGATGGAGGCGGAGCACACAAAGACGAGAAGCGAGCTGGTGCACAAGGAGACGGCGGCCAAATATACGGCAGCAATCGGCCGCATGAAGCAGCTGGAGAAAAAACTCAAACGCACCATCAACAAGTCCAAGCCCTACTTTGAGATGAAGGCGAAGTACTATCTGCAGCTGGAGaaCCTGAAGAAGAATGTGGACGAGCGGCAGGCCAAGCTGTCTCAGGCCAAAGGCGAGTATAAGACGGCGCTCAGGAACCTGGAGATGATCTCCGACGAGATCCACGAGCGACGGCGGAGCTCCACGATGGGCACCCGGGGGCGCGGCGTGGGCGCCGAGGGGGACAGTGTTTCCGGGGACGACATCTCCAGTTTTAAGATGGAGTCAGACGGAATGTCCAGTGAGTACAGAAACAGTTATTCTACCTTCTCACGCATCACCGCAGGGCTCCTCAAAGTCCAGACCACGGTCCGCATCCGGACCAAACGGCAAGTCCATCCGGACCCGTCCTACACCTCGCCTTATGAATACGATACCTTAGGAAGCGTAACGCTTTCTATTTGGAAATCAATTTCTGAGCCCCCTCGCAGCAAAGATCTCCATCGCCTCGACCTGAAGCTCCCCCAGTTCTTTCATTTCCTCCCccttccctcttcctcttcctcctccgccCCCCTTTTCCACTCTCCGCCCTccactcccccctcccccccgtcTCCTCTTTCGAGGCCCTGCAGCCTGGACCTGCCCAGCACCGTGTCGCTGTCCGACTTCGGCCTCATCTCGCCGGTGCTCGGGCCTCGCAGCGAGTGCAGCGGAGCGTCGTCGCCAGAATGTGACCTGGAGAGAGGTGACCGGGCAGAAGGTGCAGAAGGGGATCTGGACAACGCCCCGgcctccaacaacaacaacaactccacTCCAAGCACAAAGAAGAGCTTCAGCCTGGAGGCCCGCTTCAGCTTCCTCAACCTGCGCCGCCCCCGCACCGACAAAAACACGGACAACTGTTCCCAGAAGGCCGCAGCCGGGCAGACTCTGGTCTTGGTCAAAGGTGTCTAAGGACCAAAAAGAGGATTTTGACCCAAACTTTCTGATAAACAGCTGTTTATATAAGCTACCTGGCACAACTGCACTCCATTTAGAAACTCCACAGTCAGAGAGAGACTTTGAATGTCACAGTTGGTGAATATAAAGTTTCCTGTACATCTTGGCAAGTGTTGTTACTCCCATTTCCTTTATGGACATTGCACCTTTTGGACTCTCATGCCTGAGAAATAAAGACTGAATGCTGTTGTGTTTCAAATGTGTCGGTTAAGGGGGATGGAATAAAAAGATGGTTAGAAATGATTCATGTTcatatttgtttgttatttttccaCTAAAAGCTGGAAAGCCTTCTGTCGCAAAAGTACATTAGCTGTCTGAGAATGGCATCTATGAAATAAATGGGTTGGTGTAACTGTTTATCAAAATTAAGAATTCATTACTGTTAAATAGCACTTGGCATACTGTAAACCATGCAGAGGTGATGTTAAAGGAATCTTATGTGAAAATGTTCAATAAATAACTGGTCTCTTAACCTGCTGTACACTCCTGTATTTGATATGTAATGGTGTATTTTCTGAAgttatgtatgtaaatgttcaGGTTTAGGCACTGTGGACCCtccaatgtccaaaaaaagctgtttatttttcatataaagTATAATTTAATTTTTGCCACCATGATGATTGTTTAAAATGTACGTCTATCTGTTGCAAACACAGCAAAGTTATTGATATATACACAAAAAATGTGGCCTTTCGATAAGTCCCATTGCAGGTAAAAATAGAAATAGCTGCATGTAATTACTTACGACCAAATGTAAAGAATGACTTAAGTGTTTCACAGCCCTCTATAGTTTAAAGCGAAACGATTgcattgtttatttgtttaggtGAGGAGGAATAATGTAACAAAATGTTCCCTGAAGTTTACCATCAAAAGACCTAAACCAACAAAGAGTCAGCGCATCTCTCGACTTCCCTACTCCAAGCCCATTGGGTCCCGCGGAAGATGTACATGAAAGGTTGAGATTGTACAAAATGATGAACATCTGCCTAATCCGCATTATAGTAACAATTGTGAGGAAAGGTTCTTTCTTCAGtctgtgtattatgtgtgtgaacAAAATGTGATATCTGCATATTTCCATATATCTGTCACTTTTTGATGTGGAATTTAGGACAAGAACCCCCCCCAACCAGCCTGCCCTCTCATAACTATGTGTGCAGTTGGTGTTTAGTCCTCTGCATCGTCTCTCAGCAGCTAACGTGCCTGTTTTTCAGATGAAGAGTTAAATAAACGGATGTTTGCTTCATT

Function

symbol description
sh3bp5 Enables guanyl-nucleotide exchange factor activity and protein kinase inhibitor activity. Acts upstream of or within intracellular signal transduction. Located in cytoplasmic vesicle membrane and nuclear body.

NR:

description
PREDICTED: SH3 domain-binding protein 5

GO: NA

KEGG:

id description
K23739 SH3BP5; SH3-domain binding protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
TU104420 False 1060 TUCP 0.57 7 33990595 34035967
TU104431 False 1664 lncRNA 0.43 2 34038841 34042633
XM_039806163.1 True 3091 mRNA 0.49 9 33990542 34042648

Neighbor

gene id symbol gene type direction distance location
LOC120562646 NA coding upstream 54599 33922578 ~ 33935943 (+)
LOC120562644 NA coding upstream 71367 33916999 ~ 33919175 (+)
mettl6 mettl6 coding upstream 79328 33906390 ~ 33911214 (+)
bbs9 bbs9,LOC102784155 coding upstream 167713 33632641 ~ 33822829 (+)
trnap-agg_5 NA coding upstream 358829 33631642 ~ 33631713 (+)
LOC120562692 NA coding downstream 41447 34084095 ~ 34088746 (+)
LOC120561733 NA coding downstream 377259 34419907 ~ 34441093 (+)
nes NA coding downstream 567262 34609910 ~ 34622583 (+)
hapln2 hapln2,LOC102779935 coding downstream 909404 34952052 ~ 34964798 (+)
rrnad1 rrnad1 coding downstream 1000573 35043221 ~ 35058363 (+)
LOC120561795 NA non-coding upstream 2555 33984849 ~ 33987987 (+)
G78117 NA non-coding upstream 27450 33962794 ~ 33963092 (+)
G78055 NA non-coding upstream 39537 33950773 ~ 33951005 (+)
G78054 NA non-coding upstream 52074 33938259 ~ 33938468 (+)
G78052 NA non-coding upstream 67312 33922993 ~ 33923230 (+)
G78134 NA non-coding downstream 5792 34048440 ~ 34053736 (+)
LOC120561759 NA non-coding downstream 206381 34249029 ~ 34251208 (+)
LOC120561762 NA non-coding downstream 248114 34290762 ~ 34294584 (+)
G78180 NA non-coding downstream 274163 34316811 ~ 34324359 (+)
LOC120561758 NA non-coding downstream 299866 34342514 ~ 34345393 (+)
LOC120562157 NA other upstream 86257 33894360 ~ 33904285 (+)
bmper bmper other upstream 111410 33826087 ~ 33879132 (+)
G77888 NA other upstream 889008 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 1569070 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 2010633 31976318 ~ 31979909 (+)
G78200 NA other downstream 486707 34529355 ~ 34544379 (+)
LOC120562567 NA other downstream 796509 34839157 ~ 34856532 (+)
G78594 NA other downstream 1362727 35405375 ~ 35408682 (+)
LOC120562275 NA other downstream 1700647 35743295 ~ 35773988 (+)
LOC120562279 NA other downstream 1823194 35865842 ~ 35888172 (+)

Expression


Co-expression Network