G78134


Basic Information

Item Value
gene id G78134
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 34048440 ~ 34053736 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104434
AGCGGATATCATTTTTATGTATTCAAAGTTTGAAGACGTCAGTGTACCCAACATTTAGCGCAAGCTCTGCAAACATTACATCATCACTCATACAACAGGTTGCTGCAAGATTGTCCTGCTTCATATTGAAATTAGTCGGCTTGCTGccaattaaaaatacataactGAGTTTGGTAACAGAAAAGATGGCATTCATAAAAATAATGATTGATCATCAATCAGCGATTGGATATTTGACAGAAATACTTGGCAAAGTACATATATTAAAAGCTATATTCCTTCCTGAACAGAACATTTCACCCTTTTAGAACACCAGCGTGTATAGTCCATTTACAGTCGTCAGCACTAAGTTTACTATGAGTTATTGTTAACAGTAGTTATGAGTTATGAGTGAAAACAGTCACCGTGCTCCCCAGAAGCATCACTATGAAGTTCATCACATATATCATTTGCATTGAATAAATGTCTACAGTAGTGAGGCAAGTTCTCTTTGCACTGTGTGTTGACAACTAAAAGAAATTGAATGATTGTAAAACAAAGCCAATGCTTGAGGTTAACAtgataaaatcataaaaaaaaaaaaaatctgattatattgtgaaaatgtttttgtaataGTGTCCTCATTCAGTGCACAGTGCCTGGTTGATGCAGACTGCATTGAGTCAAATATACAGGCCGCAGCGGAGGGAAAACAAATTCATAATGTAGTCGATTCATCGAATAGTCGAACAACGAAAAAATATATTAACAactttgataatcaattaatagtttaagtcatttatcaagcaaacatgcaacaccaaaaaaaataaaaaataaaaaacattactgGTTCCAGGTCCAGAAATGTCTTTTACATTACACACTGTAAATTGCATATTTTATAGTTTTgcactgttggtcagacaaagcAAAGTGGAGATGTAACCTTCGGCTCTGTGACCGTTtgagggacatttaaaaaaaaaaaatttaaataaaaaataaacattttatacaacaCAAACTGTAGaatgaaataataatttgtGGCAGTCAGACTGTTGGGCTTTACAGTTGTGGATGGCGCTCCGTAAACACAGAAAGACTCAAGCCTCAACGCTGTGTAGCCGGCTGTACGCCGCAGTCAGCGTCACTATCGAACTTCCATGTAAACATTTGCATATAAACGCCTTTTGCAAAAGTGTCTTTGTCACTGACTTTTCATTTGAATTTTTCAGAAACGGAAAACAAACTCCGGTTTACTTCAGTGTGACGTTGGCTGACTGCTTCCACAAAACCTCGACGTTCATTTGAACACATTCTGCCGTCGCTGGATCCGCCGCAGCGCGCCCTTCGACTGCtacagacttctttttttttttttgccaaggaATTTGTGATGCAACTGCACAGCATTAGCTAGTTTTGCAGAGATAAGCGGCACCGAATAGAGCAGCAACATTCGTACATGACCGACTGCTGATGGGTGAAACTGTccacaccagaaaaaaaaaaaaaaatcttgataTCTGAAAAAGGGTTAAACTGCTTGTGTTGAAGAAACAAAGACATATTCATTTCCATATATTGTTTGACAATACAcatgagaaatgttttttttttttaaaagtgcagtaaaaatcaattaaaaaaagtaaaccGAGGATGTGTACTGggtattacatttacatttcaaccTGCAGAAGGTTTATGGTGAcaatcaaaaacacacagacggCTGTCTGAAGCCGAGTGCCGACATGAAATGAGGCCGATATCTCATCCCTCGGCCGTCACATCCACAGACGTGAAGAAAAACGAAGAGACATCATTCAACTGCTGCCGTACTGGGTTCCCTGtgttgctgctctgctgcactgCTCCTGAGAAtggaccaaaaaaataaaaaataccttCACGGTCATTTAAGGAAAATAACTGTCCCCTTCCACCGCGCAGACATTTAAACAGCTTTTAATAGGTTTGGCCGAGACTCCAGACTATTCAACTCTAGGTCACGTATGGCGCTTTttcattacatggtacctgctcgactctactcgccttttcgCATTAGTCTGGTCAGGGTGAAGGAGCGCAATAATTACAGAGAGGGACTGAGAATCCACAGTGGCGCcgctgaaaaataaagttttgtaATCATGGCTGCGAGTGTCAAGccacttcctttttttaaaatcacgTCGTTTTTGCAGCAGTGAGCATCTCAAGCACCAGTTCATTTCCCATTCTGTTAATTAAAAGAGGTTAGTTTTGATAAGCCACGGCAAACGTCCAGGCTCCACAACAAAGAGTTACCACTGGAGCTCTGAAGAATAATCAATTCATTGTCAACTTTGAAACGAATCGCCAACAATCATAACCGATTAACCGAATTCTCCGACTCCAGCTTCTAAAAGTCTGTATTTTCACTCCTCTATTACAGTCAACTGAATATCATTGAGTAAGGGGCCCAACGAGACATTCGAGGACGCCATCTTGGGCTTTGCAACGACATTTTTCGCcactttatagaccaaacaactaatcgattaatcgagaaaaataGTCGGCAggttaatcgacaatgaaaataattgtgagttgcagccctagttattaTGAGCCTAAGttgtatttatttctttgtGGTTTCTGGtttattatcttattttattgtatttatatcTTGGGACAGCTTGATTTCTGCAGCAGTTCTTTATTTTTGGCTTTCTGTAGAGAAGTGATATCGTGACTGATAACCACAGTTAAAGTCACAGCCAGGAAAGCCATCCCGCTAGTTTTCCCCTCGGCAGGGTCGCGCGTTATTCACAACAGACAGCTGTCATTTCAAACTGGCTATGATTGACGGCACTGTCTTTTTCCGGAGACATCATCACGATCATCATCCCCTTCCTTCACCTGCCTGGATGGACGCGTCGCTCGCTGGGCTCCAACTGatctaataaaaaacaaacaggaaacgTTTTGTCCAATTTCATCTATCTCAACTAAGATCCACAGCTTTGCCAAAAAGTATGTGGACATcctaaggcctcctgcacactggctgcgtggcgcgagcgtgtcagctgcgtggcgtgtccgttttttatttcggctcccatgttaacaggttagagcttacacactgcctgcgtgacacgcgcgTCTCAGGCACGGCCGAAAACgagtgcctgctagaaatagaaccgcaagcgtgttggaagcatttccaggttaaaatagaatacgaaaagatgtttatatgtcgtttagacacaaatacatttaataaatgacatgttgatgtttgaaagtctctagctttgacataaatgcagatataaatgtaatttaaaagacaaaaactaaataattatcgattttcaaatattgcacctgtcaatacagaacgaaatattctggagcctattttgccgtcaatactgccgacgtttctggtgtgcaaagacatagaaaacgccacgcagccgccacgcaactgacacgcaacagaaacgccgcgctcacgccacgcagccagtgtgcaggagctcTAACAGTCCACCCATGTGTGAACATTAAACATGCCATTCTTAAGCCGTAGGCATTCATCTGCTGCTAGAGCAGCCTCCAGTCTCGTGGTTTCAGCTCTTTCCATCAGATGTTGAACCTGCTGCAGGGACAAGAGCATCAGTGAGGTCCAAATGAAGCTGGGTCATCAGGTGTGGCTCATGGTGGATGAGTTTGAGTTTAAGGCTGGACGGACTATTTCTTTCACACCAAACTCTGTGAACTATTTCTTTACGGAGCTGGCTTTGTGCATTGGGGGGGGCATAGTCATGTTGTAACAGGAAAGGGACAAACGCAAACTGTTGACCCAAAGTTGGAAGAACACGGTTCTTGAATCAAATTGTATACTGTAGAATAAAACTCTTTTGCAACTGGAATTAAGGGGCCCAAACCATGAAATAGTATGTGGACAGATGTTCTCCCAGTACTGTGAGGAACTTGCTTTCCCTTTGCGATGAAAACAGATCTCCAAACGGCCATAACATTTGTGAAATTCCAAGCAGGACCAAGTACTAAGAACATTGTTCTGGATGGTTGAGGCGTTGGTTGCGGCGAAACAGAACCTGAAAAGAAGTGGCTGCTGTCAGGCAGCTTCAAAGCCAATTCTTGCAGCTCACAGCTGGTGGCTAGTGTTCATTTTTAAACCCTGTTACACCTCCGCATCCCGTCGAGTCCAGGACATAGTCCTACGATTGCGGTCATCTCCTGAGACCAGATTTAACCGTCTGATCAGAACAATGATGTCGATGCTCCATAGAAACGCTATCCATCTTATAGACCCAAGGTTTGAACGGTTCCGGAAGTGATTTTTGCCCGTTCAATTGCTCCATTGatgtttcattaaatgcttgcatgaagagttttaagcctggaaACAAGCCATCCAGCTCCGAGATGGAtctttatcataaaacatttgattcagcgcaaaaaaagaaaaaacattctgaaaacagaaaaaaggcaaacctacaagactgtgtacagaaACGACCAAAAGGCTTCCATTGTAGCAGCTCACTAGCCGCTCATGGTGGTAGGGttaacatttccatggtaacagcgagCGCCACAATTTAGAGTTGTCGTTATTACGCTTaagattgtgggtagtgtagtagtTCTCCATGACATAGCGaatgaaacatgtttttcttaaaacaggGTCGATTTCATACAGACTTACGGCTTCTACAGGAGCAAAAGCTTTCGTTTCATAATCTCGGAGccattatggctgataatcataatgcttatggagaaaatgaatggcatTTTCACTTcaggaaccacactgttgagctctctgtcactattggcgcttacccactgctagtaccagctcggCTCGGCTCTGCTCGGCTCGACCcggccgcggtgccccgtcctccattttccattgcagatttagtactgCCTCATGCGTGAGCCGAGCGtaggctggtcgtcatagcgatgccgcaggaaactgccgtgacctaacgcgacacacacgtCGAAGGCGTGTTGTTTTTGCctctcggcatgtggctgtttgccacagccagaagaccccttttgtttcaaaagaaactggaggcagcaaaaaaactatttataaatttcgggtttgttcaggaccccccccgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104434 True 5194 lncRNA 0.42 2 34048440 34053736

Neighbor

gene id symbol gene type direction distance location
LOC120562646 NA coding upstream 112497 33922578 ~ 33935943 (+)
LOC120562644 NA coding upstream 129265 33916999 ~ 33919175 (+)
mettl6 mettl6 coding upstream 137226 33906390 ~ 33911214 (+)
bbs9 bbs9,LOC102784155 coding upstream 225611 33632641 ~ 33822829 (+)
trnap-agg_5 NA coding upstream 416727 33631642 ~ 33631713 (+)
LOC120562692 NA coding downstream 30359 34084095 ~ 34088746 (+)
LOC120561733 NA coding downstream 366171 34419907 ~ 34441093 (+)
nes NA coding downstream 556174 34609910 ~ 34622583 (+)
hapln2 hapln2,LOC102779935 coding downstream 898316 34952052 ~ 34964798 (+)
rrnad1 rrnad1 coding downstream 989485 35043221 ~ 35058363 (+)
LOC120561795 NA non-coding upstream 60453 33984849 ~ 33987987 (+)
G78117 NA non-coding upstream 85348 33962794 ~ 33963092 (+)
G78055 NA non-coding upstream 97435 33950773 ~ 33951005 (+)
G78054 NA non-coding upstream 109972 33938259 ~ 33938468 (+)
G78052 NA non-coding upstream 125210 33922993 ~ 33923230 (+)
LOC120561759 NA non-coding downstream 195293 34249029 ~ 34251208 (+)
LOC120561762 NA non-coding downstream 237026 34290762 ~ 34294584 (+)
G78180 NA non-coding downstream 263075 34316811 ~ 34324359 (+)
LOC120561758 NA non-coding downstream 288778 34342514 ~ 34345393 (+)
G78195 NA non-coding downstream 415170 34468906 ~ 34469457 (+)
sh3bp5b sh3bp5,LOC102783023 other upstream 5792 33990542 ~ 34042648 (+)
LOC120562157 NA other upstream 144155 33894360 ~ 33904285 (+)
bmper bmper other upstream 169308 33826087 ~ 33879132 (+)
G77888 NA other upstream 946906 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 1626968 32405133 ~ 32421472 (+)
G78200 NA other downstream 475619 34529355 ~ 34544379 (+)
LOC120562567 NA other downstream 785421 34839157 ~ 34856532 (+)
G78594 NA other downstream 1351639 35405375 ~ 35408682 (+)
LOC120562275 NA other downstream 1689559 35743295 ~ 35773988 (+)
LOC120562279 NA other downstream 1812106 35865842 ~ 35888172 (+)

Expression


Co-expression Network