G78180


Basic Information

Item Value
gene id G78180
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 34316811 ~ 34324359 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104487
gtttgagattttaaaccaaagtctggtctttgagcatttattatattttgcaaaatatgagaatacagattcaaaggtacatgcagtacaactgaatgagcattactaaactaaaatctaaacatcacatcatcatatagtcaaaacctctctcaagccacccctctaactttatcttttagcctggTCAGAGTTGAAAATAGGACATCATTAGAAGTCAACCCATCCttaccttcccctctgctcctgttcttttcattagcctaaacaaccctttatctcaggaggcagaaggaaaCATGGTTTTGTGGCCTTCTCTACTTTGTCagctaaaaagttaaacaaaatgagaagctagagtttcttaaacaaaaaccactaggctaagagttcatggctgctgctgtccctctctggcctttaagagtctaagaggaaggaacagcatttttgtggaggtttaaaacaatctttaagcaaatggttataatcattaatcaataatggttaaaataaaatttgccaccacagtccacccttttgattacaacataatcacacaaaataaattttactttaaaaattcaAACCTTATTTCTTAAAGATTCAAACTTATGGATATAATTGTCTATTGCTGAAATGC
>TU104490
gtttgagattttaaaccaaagtctggtctttgagcatttattatattttgcaaaatatgagaatacagattcaaaggtacatgcagtacaactgaatgagcattactaaactaaaatctaaacatcacatcatcatatagtcaaaacctctctcaagccacccctctaactttatcttttagcctggTCAGAGTTGAAAATAGGACATCATTAGAAGTCAACCCATCCttaccttcccctctgctcctgttcttttcattagcctaaacaaccctttatctcaggaggcagaaggaaaCATGGTTTTGTGGCCTTCTCTACTTTGTCagctaaaaagttaaacaaaatgagaagctagagtttcttaaacaaaaaccactaggctaagagttcatggctgctgctgtccctctctggcctttaagagtctaagaggaaggaacagcatttttgtggaggtttaaaacaatctttaagcaaatggttataatcattaatcaataatggttaaaataaaatttgccaccacagtccacccttttgattacaacataatcacacaaaataaattttactttaaaaattcaAACCTTATTTCTTAAAGATTCAAACATCAAACATATCTtagaattaatcacaaaattcaACCTTTACTTCTTAAAGATTCAAACTTATGGATATAATTGTCTATTGCTGAAATGCCGTTTTTTAAagaggtacaaaaaaaaacctttttaattgTAGCAAGCGTTCACGTctaagtaaaaataataaaacaaaaaattttaATCAGTCTCACACAGTATCAGAAACAGTATCCAGAACCTCATCATCATATCTGGACATACGAAACAAGTCAGAGGACTCAGTATTCTGAAGTGCCTGATACTGTATcatatttaccatgaagatggaGGAAATCATTTTCTTGACTAGTGGGATTATGCAGCATACACAGATCAGGAAACCAAACATCAAAGTTATTAGTGGTGCAATAAATCTAGCTAACCAAGCCTTCCACCCCCCTTGAAAAACCCAGGCCCACCAGTCCCATCCTGCATAGTGTTCTGGGACGTCCTGTGCTTTGAGATTAGTCAAAAGTAGGTTCAAGTGGTGAATGGtgtcagtgatgtttcctgaaaTGTCTGGAATGAATGTGCAGCAGTGTGTGCCTATTATGTGGCAAAGTCCCCCCTGTGCTGCTAGCAATAGGTCCAATCCCATCTGATGTTGCATTAGCATGTTTCTCATAGCTCGCATAACAGGAGGAAATTCTCCAAACCCTGAAATCATCATAGCAGTCAAATTCTCAAGACTTTCCTGAACCTGATCaatattatgtgcattattTATTGTTCCATACCAAGGAAAAAACCCTGCTGCGAATTTAGTTCCTGGGCTGGTAACCTCTCGCTTATCTCTAGCCGAAACATCAGATGTGGGCACGTACATGGGATAGTGGTGTGTTGTATGCACAAGGGAAGTCATAACTGTAATGGAAGGTGTCAAATATATCATACTACATCTTCCTGCCCATCGTGAAGTCAAAATCTGATACCAATGGTCTCCACAGAGCCAAACATAATCCACAAGAGACCCTGCGCCAGAATCATCAGGCCAACGCATGGTGTGAGTCAAAGATGGTATCAGTACTGAAGCACTAAGATACCCTGGTGTGGAGTGTAAGCATGCACTAATATTTCATAAGGCTATGGTGAAACTGTCCTATACTATCAGATGCTTTTccatttttagttttaaaaatagtacCATTCGGAGCACGCACAGTGCGATTCGCAAAACCTCCACAAGGTGAAGGTTGAATAAAAGCCGAATAGAACTGACCCCCCTCCTCTCTAACATCCTTGAGTGCTGTCAGAGCACAGACAACTTCTGTGAGATTCAATGTGTGTGGTTTTACTGGGGTAGCCTGC
>TU104495
gtttgagattttaaaccaaagtctggtctttgagcatttattatattttgcaaaatatgagaatacagattcaaaggtacatgcagtacaactgaatgagcattactaaactaaaatctaaacatcacatcatcatatagtcaaaacctctctcaagccacccctctaactttatcttttagcctggTCAGAGTTGAAAATAGGACATCATTAGAAGTCAACCCATCCttaccttcccctctgctcctgttcttttcattagcctaaacaaccctttatctcaggaggcagaaggaaaCATGGTTTTGTGGCCTTCTCTACTTTGTCagctaaaaagttaaacaaaatgagaagctagagtttcttaaacaaaaaccactaggctaagagttcatggctgctgctgtccctctctggcctttaagagtctaagaggaaggaacagcatttttgtggaggtttaaaacaatctttaagcaaatggttataatcattaatcaataatggttaaaataaaatttgccaccacagtccacccttttgattacaacataatcacacaaaataaattttactttaaaaattcaAACCTTATTTCTTAAAGATTCAAACTTATGGATATAATTGTCTATTGCTGAAATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104487 False 643 lncRNA 0.34 3 34316811 34323014
TU104490 True 1934 lncRNA 0.39 3 34316811 34324359
TU104495 False 643 lncRNA 0.34 3 34316811 34323014

Neighbor

gene id symbol gene type direction distance location
LOC120562692 NA coding upstream 228065 34084095 ~ 34088746 (+)
LOC120562646 NA coding upstream 380868 33922578 ~ 33935943 (+)
LOC120562644 NA coding upstream 397636 33916999 ~ 33919175 (+)
mettl6 mettl6 coding upstream 405597 33906390 ~ 33911214 (+)
bbs9 bbs9,LOC102784155 coding upstream 493982 33632641 ~ 33822829 (+)
LOC120561733 NA coding downstream 95548 34419907 ~ 34441093 (+)
nes NA coding downstream 285551 34609910 ~ 34622583 (+)
hapln2 hapln2,LOC102779935 coding downstream 627693 34952052 ~ 34964798 (+)
rrnad1 rrnad1 coding downstream 718862 35043221 ~ 35058363 (+)
LOC120563199 NA coding downstream 735100 35059459 ~ 35071390 (+)
LOC120561762 NA non-coding upstream 22227 34290762 ~ 34294584 (+)
LOC120561759 NA non-coding upstream 65603 34249029 ~ 34251208 (+)
G78134 NA non-coding upstream 263075 34048440 ~ 34053736 (+)
LOC120561795 NA non-coding upstream 328824 33984849 ~ 33987987 (+)
G78117 NA non-coding upstream 353719 33962794 ~ 33963092 (+)
LOC120561758 NA non-coding downstream 18155 34342514 ~ 34345393 (+)
G78195 NA non-coding downstream 144547 34468906 ~ 34469457 (+)
LOC120561766 NA non-coding downstream 178514 34502873 ~ 34505357 (+)
G78219 NA non-coding downstream 310396 34634755 ~ 34658151 (+)
G78366 NA non-coding downstream 589998 34914357 ~ 34918069 (+)
sh3bp5b sh3bp5,LOC102783023 other upstream 274163 33990542 ~ 34042648 (+)
LOC120562157 NA other upstream 412526 33894360 ~ 33904285 (+)
bmper bmper other upstream 437679 33826087 ~ 33879132 (+)
G77888 NA other upstream 1215277 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 1895339 32405133 ~ 32421472 (+)
G78200 NA other downstream 204996 34529355 ~ 34544379 (+)
LOC120562567 NA other downstream 514798 34839157 ~ 34856532 (+)
G78594 NA other downstream 1081016 35405375 ~ 35408682 (+)
LOC120562275 NA other downstream 1418936 35743295 ~ 35773988 (+)
LOC120562279 NA other downstream 1541483 35865842 ~ 35888172 (+)

Expression


Co-expression Network