G78200


Basic Information

Item Value
gene id G78200
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 34529355 ~ 34544379 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104540
ggggtggtctatctgcctgtcaatcactgcttagacacgcacacgcatatatagcgttctcccctcccacttccccgcgcacgagctgcagaaaggtttcccaaaactccggtggtgaagtggcttttcagaggtggcgtgagctccgggattttaaagatctgaagaacgatgcagatgtagccacatttcttctcgacaggTCCAAAAACTTTGTGCCTTGGGCTATATGCCCATATTGTTCTTCAGCCAGAGGCACAAGGGCACAGGCAAGCTGGTGGCAAACGTGGTCACGCATCTGCCGCCAACACAAACCAACACGCGTTCATTAACCAGCATGAAGAAGGCCTACGACTTCATTATCAAACTGGATGatTCAGCTCATGCTCAGCTGCATATGGAGCTTCTACCACCCAGGAAAAGACACAGTTGCAAATGCAGTCGACAGACAATTTATCCGTATGAGAAAATATTGGAGAGATGGATGAATGGGgtcaAAGTGCGCTGGCTGCCTTGCACTTCCTGTGGCAGAGTCTGGGAGGACCCCTGGGAGCCGGCCAGCAAATTTGCCTGatgaccttttttttgtttgttttgtatatttgttttactatttgttttgtatgtttgttcaGAATTAAATTCACT
>TU104541
ggggtggtctatctgcctgtcaatcactgcttagacacgcacacgcatatatagcgttctcccctcccacttccccgcgcacgagctgcagaaaggtttcccaaaactccggtggtgaagtggcttttcagaggtggcgtgagctccgggattttaaagatctgaagaacgatgcagatgtagccacatttcttctcgacaggTCCAAAAACTTTGTGCCTTGGGCTATATGCCCATATTGTTCTTCAGCCAGAGGCACAAGGGCACAGGCAAGCTGGTGGCAAACGTGGTCACGCATCTGCCGCCAACACAAACCAACACGCGTTCATTAACCAGCATGAAGAAGGCCTACGACTTCATTATCAAACTGGATGATGTGCCCCAGCCCCAACAAGACCAGCCCCTTGCCCAAGACCAGCCCTATACCTAAGAACAGCCCCTCCCTCAAGACCAGCCCCATTCCCCAAGACCAGCCCCTTCCCCTAGACCAGCCCATCCCGCAAGACCAGCCCCCCCCCCAGACCAGCAACTTATTACTCTAAACCTATTCccgatttccccccccccagatTCAGCTCATGCTCAGCTGCATATGGAGCTTCTACCACCCAGGAAAAGACACAGTTGCAAATGCAGTCGACAGACAATTTATCCGTATGAGAAAATATTGGAGAGATGGATGAATGGGgtcaAAGTGCGCTGGCTGCCTTGCACTTCCTGTGGCAGAGTCTGGGAGGACCCCTGGGAGCCGGCCAGCAAATTTGCCTGatgaccttttttttgtttgttttgtatatttgttttactatttgttttgtatgtttgttcaGAATTAAATTCACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104540 False 648 TUCP 0.48 6 34529355 34544379
TU104541 True 843 lncRNA 0.51 6 34529355 34544379

Neighbor

gene id symbol gene type direction distance location
LOC120561733 NA coding upstream 88262 34419907 ~ 34441093 (+)
LOC120562692 NA coding upstream 440609 34084095 ~ 34088746 (+)
LOC120562646 NA coding upstream 593412 33922578 ~ 33935943 (+)
LOC120562644 NA coding upstream 610180 33916999 ~ 33919175 (+)
mettl6 mettl6 coding upstream 618141 33906390 ~ 33911214 (+)
nes NA coding downstream 65531 34609910 ~ 34622583 (+)
hapln2 hapln2,LOC102779935 coding downstream 407673 34952052 ~ 34964798 (+)
rrnad1 rrnad1 coding downstream 498842 35043221 ~ 35058363 (+)
LOC120563199 NA coding downstream 515080 35059459 ~ 35071390 (+)
snrnp48 snrnp48 coding downstream 575054 35119433 ~ 35127711 (+)
LOC120561766 NA non-coding upstream 23998 34502873 ~ 34505357 (+)
G78195 NA non-coding upstream 59898 34468906 ~ 34469457 (+)
LOC120561758 NA non-coding upstream 183962 34342514 ~ 34345393 (+)
G78180 NA non-coding upstream 204996 34316811 ~ 34324359 (+)
LOC120561762 NA non-coding upstream 234771 34290762 ~ 34294584 (+)
G78219 NA non-coding downstream 90376 34634755 ~ 34658151 (+)
G78366 NA non-coding downstream 369978 34914357 ~ 34918069 (+)
G78440 NA non-coding downstream 486529 35030908 ~ 35031135 (+)
G78488 NA non-coding downstream 624533 35168912 ~ 35173203 (+)
G78516 NA non-coding downstream 662552 35206931 ~ 35207166 (+)
sh3bp5b sh3bp5,LOC102783023 other upstream 486707 33990542 ~ 34042648 (+)
LOC120562157 NA other upstream 625070 33894360 ~ 33904285 (+)
bmper bmper other upstream 650223 33826087 ~ 33879132 (+)
G77888 NA other upstream 1427821 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 2107883 32405133 ~ 32421472 (+)
LOC120562567 NA other downstream 294778 34839157 ~ 34856532 (+)
G78594 NA other downstream 860996 35405375 ~ 35408682 (+)
LOC120562275 NA other downstream 1198916 35743295 ~ 35773988 (+)
LOC120562279 NA other downstream 1321463 35865842 ~ 35888172 (+)
G78759 NA other downstream 1566472 36110851 ~ 36190839 (+)

Expression


Co-expression Network