LOC120561757



Basic Information


Item Value
gene id LOC120561757
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 34274239 ~ 34276133 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU104606
gtcagatagttttgtgttttttgtcctGTCTGTGCCCTGTCAGTGTGTCTCAGCCATGTGCCTTTGTTTGGAATCTTCCCTGTATTCTCTTGTTCCTAAAGCACTCAATGAATACAGCGTGGATAGTTCAGAAACTGTTGGATACTGGTTTGGCCTGAGAGCTGAAGGTGGGAGATGGAAGTGGATTGATGGAAGTGATCTGACTGTAAGCTGCTGTACACCACAACCTCCTCCTGCCACTGATGGTCAGTGTGTAATGTCTGTCCAGACCAATAAATGGATATCAGTGAGCTGTACTGAGAAACAAAGATGGATCTGCATAATGAAAGCTTTATCTGTTTAAACACTGCAGTCAGACTCTGCATGATAATATCAACTGGCTTATAAATATcaaactgtaaacacatctactacacaatttaaatgttttgggtctttcttttttttaaataaaaaggaagaGTGGTTTTCTTTTTATAGAAAGAGAAATATTTATAGTGAATTATTTTGAAAAGCTGTTGGTGTAtctcatttaataaaaaaaaaacagacacttaGATTTGAATACGTTTAGATATTTGATTATATAGGTATGCTAATGTAAGTCTGTGGAACATACAGTGACTAGACTGAAGGGGCACTGTTATCATTGATACCTGTTGAATGGGCTTTTGTTCTGCTTTGTTAGAGATGTGATGCTCATAATTAGTATATCAGCAGATTGATGACAGGGACAGACAGACtgctcagtttcctgtttcctaTGTATCATGGAACATATATTGTTGCTACTCATTGGTAAAAATGGGGGCACTGCATCACTTGTTCTCAACAGAATGTCCTCAGAGCTTTTTGCTTCAGCATGTTAGGAATATTAACATgtaaaatgttttctatttatctatctagtAGCAAATTTATGTTACATTGAATTAAAAATGCTGCAACACATTGTCTTTTTCTTACATAATGCTGATTGAAAATATTTTCACCAATGTAGAACGAACATGATTCAGGAAGTTGCAGCCTATTGAACAGGA
>XR_005639640.1
tcttgtcagatagttttgtgttttttgtcctGTCTGTGCCCTGTCAGTGTGTCTCAGCCATGTGCCTTTGTTTGGAATCTTCCCTGTATTCTCTTGTTCCTAAAGCACTCAATGAATACAGCGTGGATAGTTCAGAAACTGTTGGATACTGGTTTGGCCTGAGAGCTGAAGGTGGGAGATGGAAGTGGATTGATGGAAGTGATCTGACTGTAAGCTGCTGTACACCACAACCTCCTCCTGCCACTGATGGTCAGTGTGTAATGTCTGTCCAGACCAATAAATGGATATCAGTGAGCTGTACTGAGAAACAAAGATGGATCTGCATAATGAAAGCTTTATCTGTTTAAACACTGCAGTCAGACTCTGCATGATAATATCAACTGGCTTATAAATATcaaactgtaaacacatctactacacaatttaaatgttttgggtctttcttttttttaaataaaaaggaagaGTGGTTTTCTTTTTATAGAAAGAGAAATATTTATAGTGAATTATTTTGAAAAGCTGTTGGTGTAtctcatttaataaaaaaaaaacagacacttaGATTTGAATACGTTTAGATATTTGATTATATAGGTATGCTAATGTAAGTCTGTGGAACATACAGTGACTAGACTGAAGGGGCACTGTTATCATTGATACCTGTTGAATGGGCTTTTGTTCTGCTTTGTTAGAGATGTGATGCTCATAATTAGTATATCAGCAGATTGATGACAGGGACAGACAGACtgctcagtttcctgtttcctaTGTATCATGGAACATATATTGTTGCTACTCATTGGTAAAAATGGGGGCACTGCATCACTTGTTCTCAACAGAATGTCCTCAGAGCTTTTTGCTTCAGCATGTTAGGAATATTAACATgtaaaatgttttctatttatctatctagtAGCAAATTTATGTTACATTGAATTAAAAATGCTGCAACACATTGTCTTTTTCTTACATAATGCTGATTGAAAATATTTTCACCAATGTAGAACGAACATGATTCAGGAAGTTGCAGCCTATTGAACAGGATGTGTGAGACAAGCAgattgaaagaaaaaatgacAATCACAACCATAAGCTGAATAAAATAGGGCACAACCTCAAATCAGACCATCACAGTGGAGCAGAggttttttaacccttgtgttgtcttcctgtcgaccatgaactttttttggcacttttttaaacgtttttttcaTTAAGGGTCAATAAACCTAACTTACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU104606 False 1040 lncRNA 0.36 3 34274437 34276129
XR_005639640.1 True 1242 lncRNA 0.36 3 34274239 34276133

Neighbor


gene id symbol gene type direction distance location
LOC120561742 NA coding downstream 55215 34212332 ~ 34219024 (-)
LOC120561751 NA coding downstream 85829 34172768 ~ 34188410 (-)
LOC120561746 NA coding downstream 102009 34163795 ~ 34172230 (-)
LOC120561745 NA coding downstream 127330 34144174 ~ 34146909 (-)
capn7 capn7 coding downstream 192838 34048438 ~ 34081401 (-)
LOC120561749 NA coding upstream 83923 34360056 ~ 34363807 (-)
LOC120561754 NA coding upstream 88314 34364447 ~ 34369142 (-)
LOC120561739 NA coding upstream 93558 34369691 ~ 34380293 (-)
LOC120561755 NA coding upstream 110279 34386412 ~ 34386929 (-)
LOC120561750 NA coding upstream 206653 34482786 ~ 34485762 (-)
LOC120561761 NA non-coding downstream 16766 34256659 ~ 34257473 (-)
LOC120561768 NA non-coding downstream 38387 34235214 ~ 34235852 (-)
G78118 NA non-coding downstream 310998 33962752 ~ 33963241 (-)
G78110 mettl6 non-coding downstream 365354 33906420 ~ 33908885 (-)
G78097 NA non-coding downstream 389513 33881005 ~ 33884726 (-)
LOC120561763 NA non-coding upstream 49266 34325399 ~ 34328950 (-)
G78298 NA non-coding upstream 116818 34392951 ~ 34393367 (-)
LOC120561764 NA non-coding upstream 169929 34446062 ~ 34446510 (-)
LOC120561767 NA non-coding upstream 180613 34456746 ~ 34473775 (-)
LOC120561765 NA non-coding upstream 185929 34462062 ~ 34464463 (-)
LOC120561747 NA other downstream 587 34261526 ~ 34273652 (-)
G78245 NA other downstream 127943 34095643 ~ 34146296 (-)
LOC120561744 NA other downstream 141807 34129538 ~ 34132432 (-)
LOC120561752 NA other downstream 176649 34095251 ~ 34097590 (-)
LOC120561932 NA other downstream 671291 33590521 ~ 33602948 (-)
LOC120561737 NA other upstream 40679 34316812 ~ 34323015 (-)
LOC120561748 NA other upstream 63044 34339177 ~ 34340981 (-)
G78321 NA other upstream 216213 34492346 ~ 34493195 (-)
bcan NA other upstream 698691 34974824 ~ 35004333 (-)
G78444 NA other upstream 735970 35012103 ~ 35014522 (-)

Expression



Co-expression Network