LOC120561747


Basic Information

Item Value
gene id LOC120561747
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 34261526 ~ 34273652 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104629
AGCAGAAGTCAAGTAAAGAGCATCACAGCAGACCAGACGGCCTCCTAACAGCTCTCATACAGGACTGCAGCAGgactttaaacatttgttcaGGATGAACAGAAATCCACACGAGGAGATTGCTGCCATTGGAACTTGACTCCTGCTACTGCTTCCCTCCTGCCATACAccgaaccagaaccagaaccaccACTGGACCCCTCTGCTAGCCGgcctactctctctctcactctctctctctctctctctctctctgacagacCTGCTCCTTCCTGGAATTCACCTGACCTGTTCTCCACCCTGGAAACCTGGACTTGAAACTTGAGTACTATGAATATACAGCTtct
>TU104638
gattatatagggtatttcacactgttccttatggtctcctaatggggtatgtaacattagttgggctgaaaatggcccggttgatattttattggcccttatgcatccctgtgttttggccctatttgtaacaagagcttttcttccaaatatggtatggtcatgaatatttagatgagctgcgcgctgcttggttgagccttagccccgtacacacacatatagacgcgtgctgattggttgagcgactcgccATACACagacattagaaacgctacagaatctcatattccagacactgcaatgtttccttaccaaattcacttctgagacttttttatgcgagaaatcaactatataaagctcaaatatgggccgttttacgaaaatggatggctaattgcaaatttggtaaaactgtgtgtcggagttcagctgcctgtgttgctgcctcgccgcctggcctgccttcctccacagaccccggcttgctgtgagctcgattgagctccggcacggctgctgcagcccacagcacctcatacccgcgcaaagtcaccgtttgggctaatggactactaccaaacgccgctgccctgacaaagctccagggcctgcatctcctctcttcctgctagctaaatggcccgtgtgtgagagcgcggtcagcgagcttgttacaccag
>XM_039804979.1
ctatatgtatttatgtaccACAAAGTTGTCTACATTTGTGTTTGATGTTAATCAAACACAAATTGTTATTTCAGAGGAAATTGAAGAAGAGGAAGATAACTATGTTAATGCTCCAGCCTGGACTGTGGATAAAGTGGCAGCACCTCCAGaccagagGTCTCTCTTCTTCACTCAGTCTTTTCCACTGATAGCAGTGTGTTGGCTGATACTGTTAGTCATCATGGGCCTTCGTATCTACTTTACTTCTGTCTTTTCTGAAAATGATGCCAAGCTGACGGCAGAAATCCAGCAGCTGACAACAGTAAACCTGCAGCTGGAGACACAGAGGAACAACTTAACAGAACGAATACAAGACATGGAGACAAACTTGAATGAGCTCAACGTCAGTCGAGCTCAGTGGAGCATTGATGCCTACtgccccaaaaaaacaaacgGGAGACAGTGTAACCCTTGTCAGAAGTACTGGGAACACACCGGGTCTAACTGCTATCAGTATAATGACGCTGATCCTCCTCATCAGAAAACCTGGGAAGAAGCTCGAGAAGACTGCAGAGGAAAGGGTTCAGATCTGGTTGTTGTACATAGTCAAGAGGAAAAGAATGCACTGAATACATACAGCGTGGGTAGTTCAGGAACTAATGGATACTGGTTTGGCCTGAGAGCTGAAGGTGGGAGATGGAAGTGGATTGATGGAAGTGATCTGACTGTAAGCTACTGGACACCACAACCACCTCCTCCTACTGATGGTCAGTGTGTAATGTCTGTCCAGAACAATAAATGGATATCAGTGAACTGTGCTGAGAAAAAACAATGGATCTGCATAAGGAAGGCTTTATCTGTTTAAACACAGCAGTCAGACTGCATGATAATATCAACTGGCTTGTAAATATAAAACTATGAAGACTTCCACTTcacaatttaaatgttttgtattcagaactaaaaatgttcatttatttttatagaaaaagaagagaaaataaatatttacagtGAATTATTTTGTAAAGCAGTATCTCGtttaataaaaacagacacttAGATTTGAATGCATTTAGATATCTGATTATATAGGTATGCTAATGTAAGTCTGTGGAACATACAGTGACTAGACTGAAGGGACACTGTTATCATTGATACCTGTTGAATGGGCTTTTGTTCTGCTTTGTTAGAGATGTGATGCTTATAATTAGTATATCAGCAGATTGATGACAGGGACAGACAGACCgctcagtttcctgtttcctaTGTATCATGGAACATATATTGTTGCTACTCATTGGCCAAAATGGGGGCACTGCATCACTTGTTCTCAACAGAATGTCCTCAGAGCTTTTTTCTACAGTATGTTAGGAATATTAAAGTGTaaaatattttctatttatctatctagaAGCAAATTCATGTTTTATTACATTGAATAA
>XM_039804980.1
CCAGCATGCACTGTGGATAAAGTGTCAGCCCCTCCAGaccagaggtctctcttcttctctcagtcTTTTCCACTGATAGCAGTGTGTTGGCTGATACTGTTAGTCATCATGGGCCTTCGTATCCACTCCTTCAGAAGCAGAAGTCCAGTAAAGAGCTTCACAGCAGACCAGACGGCCTCCTAACAGCTCTCATACAGGACTGCAGCAggactttaaaggggtgatagaatgattatataggCCTTCTGAAGCAGAAGTCAAGTAAAGAGCATCACAGCAGACCAGACGGCCTCCTAACAGCTCTCATACAGGACTGCAGCAGgactttaaacatttgttcaGGATGAACAGAAATCCACACGAGGAGATTGCTGCCATTGGAACTTGACTCCTGCTACTGCTTCCCTCCTGCCATACAccgaaccagaaccagaaccaccACTGGACCCCTCTGCTAGCCGgcctactctctctctcactctctctctctctctctctctctctgacagacCTGCTCCTTCCTGGAATTCACCTGACCTGTTCTCCACCCTGGAAACCTGGACTTGAAACTTGACCTTCTGAAGCAGAAGTCCAGTAAAGAGCATCACAGCAGACCAGACGGCCTCCTAACAGCTCTCATACAGGACTGCAGCAGgactttaaacatttgttcaGGATGAACAGAAGACCACAGGAGGACATTGAGGAAATTGAAGAAGAGGAAGATAACTATGTTAATGCTCCAGCCTGGACTGTGGATAAAGTGGCAGCACCTCCAGaccagagGTCTCTCTTCTTCACTCAGTCTTTTCCACTGATAGCAGTGTGTTGGCTGATACTGTTAGTCATCATGGGCCTTCGTATCTACTTTACTTCTGTCTTTTCTGAAAATGATGCCAAGCTGACGGCAGAAATCCAGCAGCTGACAACAGTAAACCTGCAGCTGGAGACACAGAGGAACAACTTAACAGAACGAATACAAGACATGGAGACAAACTTGAATGAGCTCAACGTCAGTCGAGCTCAGTGGAGCATTGATGCCTACtgccccaaaaaaacaaacgGGAGACAGTGTAACCCTTGTCAGAAGTACTGGGAACACACCGGGTCTAACTGCTATCAGTATAATGACGCTGATCCTCCTCATCAGAAAACCTGGGAAGAAGCTCGAGAAGACTGCAGAGGAAAGGGTTCAGATCTGGTTGTTGTACATAGTCAAGAGGAAAAGAATGCACTGAATACATACAGCGTGGGTAGTTCAGGAACTAATGGATACTGGTTTGGCCTGAGAGCTGAAGGTGGGAGATGGAAGTGGATTGATGGAAGTGATCTGACTGTAAGCTACTGGACACCACAACCACCTCCTCCTACTGATGGTCAGTGTGTAATGTCTGTCCAGAACAATAAATGGATATCAGTGAACTGTGCTGAGAAAAAACAATGGATCTGCATAAGGAAGGCTTTATCTGTTTAAACACAGCAGTCAGACTGCATGATAATATCAACTGGCTTGTAAATATAAAACTATGAAGACTTCCACTTcacaatttaaatgttttgtattcagaactaaaaatgttcatttatttttatagaaaaagaagagaaaataaatatttacagtGAATTATTTTGTAAAGCAGTATCTCGtttaataaaaacagacacttAGATTTGAATGCATTTAGATATCTGATTATATAGGTATGCTAATGTAAGTCTGTGGAACATACAGTGACTAGACTGAAGGGACACTGTTATCATTGATACCTGTTGAATGGGCTTTTGTTCTGCTTTGTTAGAGATGTGATGCTTATAATTAGTATATCAGCAGATTGATGACAGGGACAGACAGACCgctcagtttcctgtttcctaTGTATCATGGAACATATATTGTTGCTACTCATTGGCCAAAATGGGGGCACTGCATCACTTGTTCTCAACAGAATGTCCTCAGAGCTTTTTTCTACAGTATGTTAGGAATATTAAAGTGTaaaatattttctatttatctatctagaAGCAAATTCATGTTTTATTACATTGAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104629 False 347 lncRNA 0.50 2 34269395 34270001
TU104638 False 686 lncRNA 0.49 2 34270280 34271012
XM_039804979.1 False 1424 mRNA 0.39 6 34261526 34267777
XM_039804980.1 True 2054 mRNA 0.43 12 34261526 34273652

Neighbor

gene id symbol gene type direction distance location
LOC120561742 NA coding downstream 42502 34212332 ~ 34219024 (-)
LOC120561751 NA coding downstream 73116 34172768 ~ 34188410 (-)
LOC120561746 NA coding downstream 89296 34163795 ~ 34172230 (-)
LOC120561745 NA coding downstream 114617 34144174 ~ 34146909 (-)
capn7 capn7 coding downstream 180125 34048438 ~ 34081401 (-)
LOC120561749 NA coding upstream 86404 34360056 ~ 34363807 (-)
LOC120561754 NA coding upstream 90795 34364447 ~ 34369142 (-)
LOC120561739 NA coding upstream 96039 34369691 ~ 34380293 (-)
LOC120561755 NA coding upstream 112760 34386412 ~ 34386929 (-)
LOC120561750 NA coding upstream 209134 34482786 ~ 34485762 (-)
LOC120561761 NA non-coding downstream 4053 34256659 ~ 34257473 (-)
LOC120561768 NA non-coding downstream 25674 34235214 ~ 34235852 (-)
G78118 NA non-coding downstream 298285 33962752 ~ 33963241 (-)
G78110 mettl6 non-coding downstream 352641 33906420 ~ 33908885 (-)
G78097 NA non-coding downstream 376800 33881005 ~ 33884726 (-)
LOC120561757 NA non-coding upstream 587 34274239 ~ 34276133 (-)
LOC120561763 NA non-coding upstream 51747 34325399 ~ 34328950 (-)
G78298 NA non-coding upstream 119299 34392951 ~ 34393367 (-)
LOC120561764 NA non-coding upstream 172410 34446062 ~ 34446510 (-)
LOC120561767 NA non-coding upstream 183094 34456746 ~ 34473775 (-)
G78245 NA other downstream 115230 34095643 ~ 34146296 (-)
LOC120561744 NA other downstream 129094 34129538 ~ 34132432 (-)
LOC120561752 NA other downstream 163936 34095251 ~ 34097590 (-)
LOC120561932 NA other downstream 658578 33590521 ~ 33602948 (-)
ensab ensa,LOC103369031,LOC100695493,LOC101487776,LOC102787866,LOC102291346,LOC102199757,LOC108243249 other downstream 1228631 33022098 ~ 33032895 (-)
LOC120561737 NA other upstream 43160 34316812 ~ 34323015 (-)
LOC120561748 NA other upstream 65525 34339177 ~ 34340981 (-)
G78321 NA other upstream 218694 34492346 ~ 34493195 (-)
bcan NA other upstream 701172 34974824 ~ 35004333 (-)
G78444 NA other upstream 738451 35012103 ~ 35014522 (-)

Expression


Co-expression Network