G78389



Basic Information


Item Value
gene id G78389
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 34844289 ~ 34850430 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU104789
ACCTGCACCGACTGGTCTTCCCCACTTCCATTTCATGCCAGCGTTGCTCTAAGATGGTGGCGCGGGGCTGCGTCTCGCTGTACAGGAAAAAGGGGGCAGTCGGCTGAGGATGGAgcggaggaggaagggaggaggattaggaggaggagggaagaggcGATGCAGAGGAGGGCGAGGAGAGAGGCAGGGCAGAATCAACAGcaacccctcctcctccttcttctctgtttttcagtctcCTTTTTTGCCAGCTTCCCTTCAGTGGTGGTGTGGTTGGTAGCCTTTTGCTGCGTTCCGCCCCACGTCTCCTTTTAAACGTCGTCCGTCTTCTTCTCTGGTGTTGCAGTTCTTGTTCTTGCagtctgttctttttttttttgagggtgGCCCGTTTGGGGTCTTGATGCCTTTTCAGGAGTGTAATGGGATTCTTGTTACTTTCGGTTATCTAGCTTTATGAAGAATGTACATCACTCATACAGCTAGATAACCAAAGATAACAACCAACCCCTAAGGCTACCCATCCTCTCAAGCCGCAGGCAAAGGGACATGGCCCAAGTTCTGGCCTGTAAGCAAAGGAAAAAAGttcttgataaaaaaaaaaaaaaacataacatgtcTACATCTCTTTGATTTGACATGATTTCAATGATCACAGACTAACTTGGGAAGGTGTTAAAATGGAACGTCATAAAAAGAGCAGAGTCTGGAAATCCGAGAGCAGTTGATGCCACCTCTGAACAAAGACGTTACTCTTCTGGTTTAgggccttttttttcccctcactcAACCTACGGCGGCTCTTAAATGTCCTGACCCTTCATTTTGTGACGACACCAAGTGGCCCCCCTCACCCCCGCCTCAAACCGCCTCGGCCAATTGGAAACCTTCCTTTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU104789 True 896 lncRNA 0.49 2 34844289 34850430

Neighbor


gene id symbol gene type direction distance location
LOC120562852 NA coding downstream 34440 34807830 ~ 34809849 (-)
mef2d mef2d,LOC103369254,LOC103388711 coding downstream 65684 34634741 ~ 34778605 (-)
LOC120561738 NA coding downstream 244250 34585627 ~ 34600039 (-)
LOC120561740 NA coding downstream 314236 34517477 ~ 34530053 (-)
LOC120561750 NA coding downstream 358527 34482786 ~ 34485762 (-)
rhbg rhbg2a,LOC106605319 coding upstream 63891 34914321 ~ 34932785 (-)
isg20l2 isg20l2 coding upstream 183453 35033883 ~ 35043980 (-)
LOC120563201 NA coding upstream 222528 35072958 ~ 35088429 (-)
sri sri,LOC102777834,LOC101483957 coding upstream 252546 35102976 ~ 35110676 (-)
trnap-agg_6 NA coding upstream 283234 35133664 ~ 35133735 (-)
LOC120561760 NA non-coding downstream 284742 34558496 ~ 34559547 (-)
LOC120561769 NA non-coding downstream 349530 34493956 ~ 34494759 (-)
LOC120561767 NA non-coding downstream 370514 34456746 ~ 34473775 (-)
G78318 NA non-coding downstream 374771 34468899 ~ 34469518 (-)
LOC120561765 NA non-coding downstream 379826 34462062 ~ 34464463 (-)
LOC120562743 NA non-coding upstream 18957 34869387 ~ 34888246 (-)
G78406 NA non-coding upstream 59928 34910358 ~ 34910573 (-)
G78446 NA non-coding upstream 176948 35027378 ~ 35027581 (-)
G78448 NA non-coding upstream 180212 35030642 ~ 35030846 (-)
G78450 rrnad1,LOC102779171 non-coding upstream 196497 35046927 ~ 35047141 (-)
G78321 NA other downstream 351094 34492346 ~ 34493195 (-)
LOC120561748 NA other downstream 503308 34339177 ~ 34340981 (-)
LOC120561737 NA other downstream 521274 34316812 ~ 34323015 (-)
LOC120561747 NA other downstream 570637 34261526 ~ 34273652 (-)
LOC120561744 NA other downstream 711857 34129538 ~ 34132432 (-)
bcan NA other upstream 124394 34974824 ~ 35004333 (-)
G78444 NA other upstream 161673 35012103 ~ 35014522 (-)
G78496 NA other upstream 323436 35173866 ~ 35177239 (-)
plekhf2 plekhf2 other upstream 417927 35268357 ~ 35309397 (-)
G78733 LOC104935873 other upstream 1174301 36024731 ~ 36026542 (-)

Expression



Co-expression Network