G78444


Basic Information

Item Value
gene id G78444
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 35012103 ~ 35014522 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104853
CTTTGTTCACTATGGCCTGTGCTACATGTCACCTGTTgtgaaaatttaaataaaaagtttgaataaattaaatattaaaagcaTTTAGACAAAGTGCAACAGGACTTTcaaatacaattaaaaacagTCCTTAAACAGCCAagagaatagaaaaaaaaatatatatacatagaaaTGGGATAGATGTGCTGATGGTAAacagtatctctctctctctctctctctctctctctctctctctctctctctctccagaagAATCTTTGacatgaacaaaaacaaattttaaacTAGACGAGAGAGCGTAGACATCTGCCAAGGCCAAACACCCTATCACACAATGTTAAACAATTTGTGTATCTCCCCCCCTTCCCTTCCCTTGATTTGGATAAAAATTGAATGGGTTCCTCTTTGGCCCATGCTTCACCCTTCCACTACATTTCTTGAAAATCAGGACAGACAGTTTTTGTAATCCTGCTGGCAAACAAACACACCGAATGGATTACGTATAGGGAAATTGCAATACCAATTTTGCTTGGATGTAAAAGAGATACTTGGAGAAAtaatgctgtaaattgtacaatccgAGAAGCAACCATCGGAGgtttttataatgcaccaggttaacGTTGACATTAAGAACTGACCCCCAAAACGTTTGTGTTGAGTTATACATCAACAGTAAAGaggcatatataaaaaaaaaataataatcaatatcaaatcactcaaacaaagattgAGTTTAACTGaataattattttaacccagTCCTAGTCAAAAAGCTATCGTTTTCCATCACAGAATTcagtttgtctgaacagattgACGCTCATCATTCTGTTCCACCGTCACACGGACCTTCAGTGGTAAAACCCTTCAGTTCATCCCCAGTGCCCATCAATGGAAACAGCctctcagtgaaagtgtgtttgaaggtgtgtatgtgtgtgttagcatcAGCATCAAAGAACGACAGCTCTCCTCTGttccagtccagagtcactctgATCCTCTGGGGCTTCTTCTGCACAACGAGAACACTGTCTGCATCTGGTGGAGACAATGTTGAGTATTTACCTTCATCAAACTGTAAGACCCATAATCCAGACCATATGTCTTCCGTTCTCTGGACAGACTCCGCTAACACACCCAGGTCCCAGTCTGTACGGTCTCCGACCTCGACATCCCAGCTGCGAGTCCCTGAATTAAAGCCCTCAGAACCCAGCCCAACGCAGTAGtcatcaaacctctctggattacCAGGAAGCTCCTGCGTTTCTTCTCCTCGCCTCACACTGGTCAGAGCTTCAGACAGGATGAGTGCTGGATcagcagtgtttgggtccagaaccacaggagtgtaggagaccatgtccttcatcttgttccTGATGTTGAAGCTCAGGTCGCCCAGGTCTTTGGCCTCGTCTAGcagagctcctgagagcagctgtgggtcatccagcagggggcgctgctggactctttccactgcagccttgtTGTTCAGGAGTGAGAAGTCTTCagctctcagctcctcctctgtggctcggactgtgtctgaaagagtTGCCATCTCGCCGCACAGAGCCTTtatcttctccttcatcctccaactcttctgctcctcttcctccctcagcgcagccatcctggcctcctcttcatctcctAGAAACCAGCGAAGCTTCTTAAACTGCTCCTTAATCTGCACCTCTGTGCGTCGGGCCTGGACCTTCATGTGTTCTGCGGTTTGATCAAACTTCACTTTAACTCGTTCGCAAACCTGTAACTTCTCCTTTAAGGGCTCCAGAGTTTCTTGAAGTTCCTTCCTGTGTTGTCGTGCAGCTTCATCGATGGGCATGAATCTGTGGGTGGAGTGCGTTTCTGAATGCAGACGGACGACCggctgctgatggtccagatagaagagtttgagtttctcagagtgcagactgcagagagcctctgaagctctctgctctctctctccagtaagAAACTCTCACACAGGTTCTTTAACACCACGTTTAAAGGTGGTGCTAACCTTGAAGATACTCCCTTACAAACTGGACACTCTCTGATTCGTTTCACTTTCCACCAGCTCTGTGGCTACACAGCAGGAGGACAGGCTCTTTAAAGATTTCATGGCAGATCGGACAGCAGAAATTGTCCTCTAAGCTGGAAGCCATTTAGGACAGGACTCAGGATACAGCCACTACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104853 True 2226 TUCP 0.45 3 35012103 35014522

Neighbor

gene id symbol gene type direction distance location
rhbg rhbg2a,LOC106605319 coding downstream 79318 34914321 ~ 34932785 (-)
LOC120562852 NA coding downstream 202254 34807830 ~ 34809849 (-)
mef2d mef2d,LOC103369254,LOC103388711 coding downstream 233498 34634741 ~ 34778605 (-)
LOC120561738 NA coding downstream 412064 34585627 ~ 34600039 (-)
LOC120561740 NA coding downstream 482050 34517477 ~ 34530053 (-)
isg20l2 isg20l2 coding upstream 19361 35033883 ~ 35043980 (-)
LOC120563201 NA coding upstream 58436 35072958 ~ 35088429 (-)
sri sri,LOC102777834,LOC101483957 coding upstream 88454 35102976 ~ 35110676 (-)
trnap-agg_6 NA coding upstream 119142 35133664 ~ 35133735 (-)
trnap-ugg_1 NA coding upstream 120469 35134991 ~ 35135062 (-)
G78406 NA non-coding downstream 101530 34910358 ~ 34910573 (-)
LOC120562743 NA non-coding downstream 123857 34869387 ~ 34888246 (-)
G78389 NA non-coding downstream 161673 34844289 ~ 34850430 (-)
LOC120561760 NA non-coding downstream 452556 34558496 ~ 34559547 (-)
LOC120561769 NA non-coding downstream 517344 34493956 ~ 34494759 (-)
G78446 NA non-coding upstream 12856 35027378 ~ 35027581 (-)
G78448 NA non-coding upstream 16120 35030642 ~ 35030846 (-)
G78450 rrnad1,LOC102779171 non-coding upstream 32405 35046927 ~ 35047141 (-)
G78451 rrnad1 non-coding upstream 38764 35053286 ~ 35054192 (-)
G78452 NA non-coding upstream 43446 35057968 ~ 35058870 (-)
bcan NA other downstream 7770 34974824 ~ 35004333 (-)
G78321 NA other downstream 518908 34492346 ~ 34493195 (-)
LOC120561748 NA other downstream 671122 34339177 ~ 34340981 (-)
LOC120561737 NA other downstream 689088 34316812 ~ 34323015 (-)
LOC120561747 NA other downstream 738451 34261526 ~ 34273652 (-)
G78496 NA other upstream 159344 35173866 ~ 35177239 (-)
plekhf2 plekhf2 other upstream 253835 35268357 ~ 35309397 (-)
G78733 LOC104935873 other upstream 1010209 36024731 ~ 36026542 (-)
G79034 dek,LOC100692760,LOC101471355,LOC102210945,LOC102312342 other upstream 1088475 36102997 ~ 36105675 (-)
creb3l4 NA other upstream 1324559 36339081 ~ 36359580 (-)

Expression


Co-expression Network