G78518


Basic Information

Item Value
gene id G78518
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 35230451 ~ 35230899 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU104981
CGGTAAGAAGATTTCTCCTGTAGAAATCATCTATTAAAACTtaacagtgactacgtttacaagctgtcaattttcgggttatggtcgggttaaggtcactgttcgggtttctgaaacattcggaataacccgtttacatgcgtgagcagagagagttactcctacatggaatctgtaatcaaatggcaatatcccgatgtaaacggcgacgcacggttagcgtctggacgtagcctacggacaaccttaagacacaataacttttcggtcaccttcttataaatctcactatctcggtactttctgccgtcaacaaaagacattatattattatattatattcatggttttcaccacactgatgaagaaatcggtttcctcctcgctccaaaagtgtggtgctgtgctgcgtctcgccatgtttacctctacttcttgtttacttccgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104981 True 449 lncRNA 0.42 1 35230451 35230899

Neighbor

gene id symbol gene type direction distance location
wdr73 csgr05h8orf37 coding upstream 139 35208147 ~ 35230312 (+)
c7h8orf37 csgr05h8orf37,LOC103366206 coding upstream 29057 35188683 ~ 35201394 (+)
trnas-aga_7 NA coding upstream 42252 35188118 ~ 35188199 (+)
cd83 NA coding upstream 46894 35177408 ~ 35183557 (+)
zgc:113232 LOC103366216 coding upstream 62271 35129114 ~ 35168180 (+)
LOC120561699 LOC102800167,LOC102194503,LOC101481262,LOC104936483,LOC103358273 coding downstream 126355 35357254 ~ 35362521 (+)
nagpa NA coding downstream 217669 35448568 ~ 35489477 (+)
tp53inp1 NA coding downstream 277434 35508333 ~ 35528009 (+)
ccne2 LOC103358269 coding downstream 304148 35535047 ~ 35546748 (+)
LOC120562274 NA coding downstream 390861 35621760 ~ 35630081 (+)
G78516 NA non-coding upstream 23285 35206931 ~ 35207166 (+)
G78488 NA non-coding upstream 57248 35168912 ~ 35173203 (+)
G78440 NA non-coding upstream 199316 35030908 ~ 35031135 (+)
G78366 NA non-coding upstream 312382 34914357 ~ 34918069 (+)
G78219 NA non-coding upstream 572300 34634755 ~ 34658151 (+)
G78519 NA non-coding downstream 1247 35232146 ~ 35232446 (+)
G78524 NA non-coding downstream 9138 35240037 ~ 35240487 (+)
G78525 NA non-coding downstream 11433 35242332 ~ 35242570 (+)
G78527 NA non-coding downstream 13848 35244747 ~ 35244991 (+)
LOC120561545 NA non-coding downstream 14844 35245743 ~ 35252114 (+)
LOC120562567 NA other upstream 373919 34839157 ~ 34856532 (+)
G78200 NA other upstream 686072 34529355 ~ 34544379 (+)
sh3bp5b sh3bp5,LOC102783023 other upstream 1187803 33990542 ~ 34042648 (+)
LOC120562157 NA other upstream 1326166 33894360 ~ 33904285 (+)
bmper bmper other upstream 1351319 33826087 ~ 33879132 (+)
G78594 NA other downstream 174476 35405375 ~ 35408682 (+)
LOC120562275 NA other downstream 512396 35743295 ~ 35773988 (+)
LOC120562279 NA other downstream 634943 35865842 ~ 35888172 (+)
G78759 NA other downstream 879952 36110851 ~ 36190839 (+)
G78772 NA other downstream 1027261 36258160 ~ 36350995 (+)

Expression


Co-expression Network