G78544


Basic Information

Item Value
gene id G78544
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 35322816 ~ 35350378 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105010
accctcaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgtctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaacaatcacagctaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgtctaaccttaacccttaccctaaccttaaccatcaccactaaatgcctaaccttaactcttaccctcaccctaaccataacctaattctatccctaatcctacaaccaagtcttaaccctcaaacagccctttaaacattgtggggtccagcattttggccccacaaagctgtcgggaccctggtttttggaccccacgaatatagttaaacaagccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaggatatatCAGTGGACAACTGTAGGATGTGTTTACTACTaataaacatgca
>TU105012
ccgtCATTGACAttattccctagccccttaccctaaccatcacaactaaatgtctaaccttaacccttaccctaaccttaaccatcacaactaaatgtctaaccttaacccttaccctaaccttaaccatcacaactaaatgtctaaccttaacccttaccctaaccttaaccatcacaactaaatgtctaaccttaacccttaccctcaccctaaccataacctaattctatccctaatcctacaaccaagtcttaaccctcaaacagccctttaaacattgtggggtccagcattttggccccacaaagctgtcgggaccctggtttttggaccccacgaatatagttaaacaagccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaggatatatCAGTGGACAACTGTAGGATGTGTTTACTACTaataaacatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105010 True 818 lncRNA 0.42 2 35348975 35350378
TU105012 False 481 lncRNA 0.43 3 35322816 35350378

Neighbor

gene id symbol gene type direction distance location
wdr73 csgr05h8orf37 coding upstream 92504 35208147 ~ 35230312 (+)
c7h8orf37 csgr05h8orf37,LOC103366206 coding upstream 121422 35188683 ~ 35201394 (+)
trnas-aga_7 NA coding upstream 134617 35188118 ~ 35188199 (+)
cd83 NA coding upstream 139259 35177408 ~ 35183557 (+)
zgc:113232 LOC103366216 coding upstream 154636 35129114 ~ 35168180 (+)
LOC120561699 LOC102800167,LOC102194503,LOC101481262,LOC104936483,LOC103358273 coding downstream 6876 35357254 ~ 35362521 (+)
nagpa NA coding downstream 98190 35448568 ~ 35489477 (+)
tp53inp1 NA coding downstream 157955 35508333 ~ 35528009 (+)
ccne2 LOC103358269 coding downstream 184669 35535047 ~ 35546748 (+)
LOC120562274 NA coding downstream 271382 35621760 ~ 35630081 (+)
G78535 plekhf2 non-coding upstream 52951 35267769 ~ 35269865 (+)
G78534 NA non-coding upstream 60359 35260160 ~ 35262457 (+)
G78532 NA non-coding upstream 69538 35252984 ~ 35253278 (+)
LOC120561545 NA non-coding upstream 70702 35245743 ~ 35252114 (+)
G78527 NA non-coding upstream 77825 35244747 ~ 35244991 (+)
G78549 NA non-coding downstream 1213 35351591 ~ 35352815 (+)
G78551 NA non-coding downstream 5645 35356023 ~ 35356485 (+)
G78588 NA non-coding downstream 39137 35389515 ~ 35389883 (+)
G78592 NA non-coding downstream 42755 35393133 ~ 35393599 (+)
G78607 NA non-coding downstream 147982 35498360 ~ 35498738 (+)
LOC120562567 NA other upstream 466284 34839157 ~ 34856532 (+)
G78200 NA other upstream 778437 34529355 ~ 34544379 (+)
sh3bp5b sh3bp5,LOC102783023 other upstream 1280168 33990542 ~ 34042648 (+)
LOC120562157 NA other upstream 1418531 33894360 ~ 33904285 (+)
bmper bmper other upstream 1443684 33826087 ~ 33879132 (+)
G78594 NA other downstream 54997 35405375 ~ 35408682 (+)
LOC120562275 NA other downstream 392917 35743295 ~ 35773988 (+)
LOC120562279 NA other downstream 515464 35865842 ~ 35888172 (+)
G78759 NA other downstream 760473 36110851 ~ 36190839 (+)
G78772 NA other downstream 907782 36258160 ~ 36350995 (+)

Expression


Co-expression Network