G78562


Basic Information

Item Value
gene id G78562
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 35238560 ~ 35238761 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105038
CCCTACTCTAGACACcgctgagaagtcaagacagccaaaatcaactagattagatgtgagatggtgtccgagcctagtcttttcaaagtctttagtgtatggtaggcataACGTGTGTTTGTGATCTCTATTTCATCGTATCAATGAGCCTTGTCGCGATGTAGCAACTCCTCGGCTTCTCCACAGCGCTActctgtaatta

Function

GO: NA

KEGG:

id description
ko04670 Leukocyte transendothelial migration
ko04380 Osteoclast differentiation
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
TU105038 True 202 lncRNA 0.45 1 35238560 35238761

Neighbor

gene id symbol gene type direction distance location
trnap-cgg_2 NA coding downstream 102399 35136090 ~ 35136161 (-)
trnap-ugg_1 NA coding downstream 103498 35134991 ~ 35135062 (-)
trnap-agg_6 NA coding downstream 104825 35133664 ~ 35133735 (-)
sri sri,LOC102777834,LOC101483957 coding downstream 127884 35102976 ~ 35110676 (-)
LOC120563201 NA coding downstream 150131 35072958 ~ 35088429 (-)
ndufaf6 ndufaf6,LOC102799695 coding upstream 170561 35409322 ~ 35448298 (-)
LOC120562452 NA coding upstream 315462 35554223 ~ 35565907 (-)
si:dkey-22o22.2 LOC103358277,LOC102314041,LOC101480092,LOC102196329,LOC108240367,LOC102218962 coding upstream 339948 35578709 ~ 35819797 (-)
LOC120562453 NA coding upstream 596341 35835102 ~ 35842232 (-)
LOC120563121 NA coding upstream 694273 35933034 ~ 35938978 (-)
G78560 NA non-coding downstream 1696 35235786 ~ 35236864 (-)
G78559 NA non-coding downstream 3021 35234424 ~ 35235539 (-)
G78556 NA non-coding downstream 6015 35232314 ~ 35232545 (-)
LOC120562928 NA non-coding downstream 6378 35228677 ~ 35232182 (-)
G78508 NA non-coding downstream 52073 35185678 ~ 35186487 (-)
G78563 NA non-coding upstream 651 35239412 ~ 35239773 (-)
G78565 NA non-coding upstream 4098 35242859 ~ 35243064 (-)
G78567 NA non-coding upstream 21424 35260185 ~ 35261669 (-)
G78566 NA non-coding upstream 23026 35261787 ~ 35264826 (-)
G78582 NA non-coding upstream 110225 35348986 ~ 35350176 (-)
G78496 NA other downstream 61321 35173866 ~ 35177239 (-)
G78444 NA other downstream 224038 35012103 ~ 35014522 (-)
bcan NA other downstream 234227 34974824 ~ 35004333 (-)
G78321 NA other downstream 745365 34492346 ~ 34493195 (-)
LOC120561748 NA other downstream 897579 34339177 ~ 34340981 (-)
plekhf2 plekhf2 other upstream 29596 35268357 ~ 35309397 (-)
G78733 LOC104935873 other upstream 785970 36024731 ~ 36026542 (-)
G79034 dek,LOC100692760,LOC101471355,LOC102210945,LOC102312342 other upstream 864236 36102997 ~ 36105675 (-)
creb3l4 NA other upstream 1100320 36339081 ~ 36359580 (-)
LOC120563186 LOC103369286,LOC103131393,LOC106962355,LOC106910391 other upstream 1425781 36664542 ~ 36748238 (-)

Expression


Co-expression Network