G78567


Basic Information

Item Value
gene id G78567
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 35260185 ~ 35261669 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105043
acACTCTGTAACTGCACATTTTCTTTCCGGATCGCCGctgaaaagtgtaaaaacagtCCGCAGATTGTGTTTGGGTGTGGTTAGGACCTACGCAGCATGTGCAGACCAGCTTACCTCAGTGAAGGTGCATACTTGCACAAATACCTCCGGTTACTAACAGAGTTATCTAGCTCTAATGTTCATTTGTATAAGGACCAGTATGAGTAGACCTATGCCAAACACCAGAGCATTTATAGCCTAAGCTAATATGCAATGCACGTCCCTAGatggacctttttttttctttaacagagGTATGACAACTCAGATTTTAGCCGGGGTACTGCCTTAACCCGAATATAATCaggtttttaaactgcatgtaaatgcactgaatcaagtcaagtcaattttattataGCACAATATTCTACAAGAAAGTCCATACAGCCGTACAGCATATGACGCCCTCTTTCCTTTGACCTGAGTTAAGGTGTAGGCCTATAAATAGGCTAATAGTTATCTCTGTTATGTCTGTTAACCGGGGTATGAGAACTCCGATTTTCGTGGTAAGGTGTTTACATGGTGTTTGAGAAACCGGGATATTGCCTTAACCTGATTTATATAATCAGGTTTTTAAACCGAATGTGAACTCAATCAAGAAAAGTCTAATGTATTAAagcccaatatcacaaaaaGCCGGGTTTTTAAAAGCCGTACAGCATACGACGCCCTCTTTCCTTTGACCTTCGCATCccgtaagaaaaaaaaaaaggtcaaccCTTTACTTGGAgttatctacataagagtgacatgaaccctaactctaactctaaccctaacttgtcatgaaaGAACAGAATGACcgttactaaaagaagcgttctTGTCTTGTCTCTTGacctgtttataatgtttatgacacgttcacgaccgtgtcatgtcactcttatgtagacaCCTTCAAGTCTAGTGTAAATGAAAAAACTCCCaccaaaaaaaccaaaaaaaaacctttaacgGAGGAAACTGCAAATTGCGAAAGCCTAAATAAGTTGTTTTTCCAGCTAAACGTGACTGTTTGTTAAATTCAGACACgttgaagctctgtcctcacaCTGTgactagaaacacacacacacacacacacacacacacacacacacacacacacacaaaaataaaaacaaaaaccagtTTCAGGTGTAACTTGATAAAATGACAGCTGCAGATCCTGAGATGTGTTGAGGAAACGATGTAACGAGGAGACCTGTTGTTACAGCTGAAAGAAAGATCATTGTGGGTGGGGGGTGTTTTAACTATAATTTAGTTTTTCTGTTTGTGCGAGCCGCTCACACCGGTCTCATGGATCTAATGTTCTCTCTGTTGCTTTTTGACGATGTCACTGTTGGTtggtgtccttttttttttttttttttcattttatttctttttaaaaggcttctaaaaaaacaacaaagggcTTCAATCAGAATGTAACCCAGC

Function

GO:

id name namespace
GO:0050877 nervous system process biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0007600 sensory perception biological_process
GO:0007601 visual perception biological_process

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU105043 True 1485 lncRNA 0.39 1 35260185 35261669

Neighbor

gene id symbol gene type direction distance location
trnap-cgg_2 NA coding downstream 124024 35136090 ~ 35136161 (-)
trnap-ugg_1 NA coding downstream 125123 35134991 ~ 35135062 (-)
trnap-agg_6 NA coding downstream 126450 35133664 ~ 35133735 (-)
sri sri,LOC102777834,LOC101483957 coding downstream 149509 35102976 ~ 35110676 (-)
LOC120563201 NA coding downstream 171756 35072958 ~ 35088429 (-)
ndufaf6 ndufaf6,LOC102799695 coding upstream 147653 35409322 ~ 35448298 (-)
LOC120562452 NA coding upstream 292554 35554223 ~ 35565907 (-)
si:dkey-22o22.2 LOC103358277,LOC102314041,LOC101480092,LOC102196329,LOC108240367,LOC102218962 coding upstream 317040 35578709 ~ 35819797 (-)
LOC120562453 NA coding upstream 573433 35835102 ~ 35842232 (-)
LOC120563121 NA coding upstream 671365 35933034 ~ 35938978 (-)
G78565 NA non-coding downstream 17121 35242859 ~ 35243064 (-)
G78563 NA non-coding downstream 20412 35239412 ~ 35239773 (-)
G78562 NA non-coding downstream 21424 35238560 ~ 35238761 (-)
G78560 NA non-coding downstream 23321 35235786 ~ 35236864 (-)
G78559 NA non-coding downstream 24646 35234424 ~ 35235539 (-)
G78566 NA non-coding upstream 118 35261787 ~ 35264826 (-)
G78582 NA non-coding upstream 87317 35348986 ~ 35350176 (-)
G78583 NA non-coding upstream 90293 35351962 ~ 35352212 (-)
G78591 NA non-coding upstream 130381 35392050 ~ 35392352 (-)
G78613 NA non-coding upstream 143678 35405347 ~ 35407517 (-)
G78496 NA other downstream 82946 35173866 ~ 35177239 (-)
G78444 NA other downstream 245663 35012103 ~ 35014522 (-)
bcan NA other downstream 255852 34974824 ~ 35004333 (-)
G78321 NA other downstream 766990 34492346 ~ 34493195 (-)
LOC120561748 NA other downstream 919204 34339177 ~ 34340981 (-)
plekhf2 plekhf2 other upstream 6688 35268357 ~ 35309397 (-)
G78733 LOC104935873 other upstream 763062 36024731 ~ 36026542 (-)
G79034 dek,LOC100692760,LOC101471355,LOC102210945,LOC102312342 other upstream 841328 36102997 ~ 36105675 (-)
creb3l4 NA other upstream 1077412 36339081 ~ 36359580 (-)
LOC120563186 LOC103369286,LOC103131393,LOC106962355,LOC106910391 other upstream 1402873 36664542 ~ 36748238 (-)

Expression


Co-expression Network