G78613


Basic Information

Item Value
gene id G78613
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 35405347 ~ 35407517 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105108
CTGTGCCGTCTTTTCatggtgtagtgcagggaaatacgATCCGCcctgagcacggtgtattttattttgaaaattaaccggatatttattttgtttctgtgctcgacttcctgtcccgcactatctgccgtgtgctgaatcgctgcggagctctccggcgtccgtcAAAagtagaagctctgcgtatatctgctccggagggctgcggactgactGAGCTGGGACGCAgacgttctgcagtcagtggaagtacacacactgactttaatggaaacctgatGACTCCGGAGACGTTCCGGAGACGTTCCGGAGACGTTGcggagacgttccgcatccagtggaaattgccgttTAATCTTCTGGTCTCACGAGTCGATTCAATATCGCAGTGCGTCACCTCCTCAgtattatatattgctacacatggttttcatcaacaaattcaagcagtcagatataaaTGAACTCCCCtattttattgtatctgcttcaaaaaaaagacacttcctgaacaTAGTGGAGTCTAAACACAGCAGAAGGGGTCAGCAGCATGttaccacatttctaagattttatttttcactgaaaattaggccctatgttcccacatttctaagattttccttaaaattaggccctatgttcccacatttctaagattttccttaaaattaggccctatgttcccacatttctaagatttttcttaaaattaggccctatgttcccacatttctaagatttttcttaaaattaggccctatgttcccacatttctaagattttccttaaaattaggccctatgttcccacatttctaagatttttcttaaaattaggccctatgttcccacatttctaagattttccttaaaattaggccctatgttcccacatttctaagatttttcttaaaattatgccctatgttcccacatttctaagatttttcttaaaattatgccctatgttcccacatttctaagattttccttaaaattaggccctatgttcccacatttctaagatttttcttaaaattaggccctatgttcccacatttctaagattttccttaaaattaggccctatgttcccacatttctaagattttccttaaaattaggccctatgttcccacatttctaagatttttcttaaaattaggccctatgttcccacatttctaagattttccttaaaattaggccctatgttcccacatttctaagatttttcttaaaattaggccctatgttcccacatttctatgacatttttaaaattaggtcttgtgttcctacatttcccttcaatttaagccccatcatcccacaacattttttagggttagggggataaaatctgatacaaatttatgaaaaaggaaatgtgggaacatagggcctaattttgaaaataatcttagaaatgtagCAACATAGgcacacaaaaggcaaaaacaaaacccCGGAAAATCAACGAGACATCAGGCAGTAATCGATTATGGTCGGTGACTACATCGATGCAATGATTCATTTAATTTTCCGATACTTCAGAGGCCATTTGGTTTGGTGACtataaagtattgaattcggcgCCCAGCCCTAGAGACGAGCGCTGCCACCAGAATTCACGTTCACCTCGAAACTTAGACTTTGAAGACTGGGTGCTGGATCCTAAAAGTGGAAAGTAATATATAAAGGTAATTTGTACATCACTCCAGTTAATACTTTTTATTGCCACACGGACATTTCGGGCATGACGCATTCTTCAACGTGTTTGACAGGCAATCTCCTGCCGGAAATATCCACCTGGCAATAAACCGTATTAATTGGGTCGATGTCCAAATTACCGTTTTATACACCATATGTTTTATGCACGCTTAAAGAGAGAATCCCGGTTTATTAGAGCTTATTTTTGTAGTTTCAGCCATCATTTCTatctgtaataataatgtaactTCCAAGATCATTCCTGAAAGCTGGAAACACGGTGACATCAGGTCTTAAAACCCTATTTTGGAAGAGAAAGACTATCAGAAAAATTATAACAAAAACTGTCAGCTGTAAACacttgttcaaactgtaaaatgcttttattttgaagagaaACTTCTCTCTCTTATTTCTAAGAGTCAAAAGTGAATTGTCagctttcacaataaaagc

Function

GO:

id name namespace
GO:0008180 COP9 signalosome cellular_component
GO:0016840 carbon-nitrogen lyase activity molecular_function
GO:0016842 amidine-lyase activity molecular_function

KEGG:

id description
ko03050 Proteasome
ko05169 Epstein-Barr virus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU105108 True 2171 lncRNA 0.38 1 35405347 35407517

Neighbor

gene id symbol gene type direction distance location
trnap-cgg_2 NA coding downstream 269186 35136090 ~ 35136161 (-)
trnap-ugg_1 NA coding downstream 270285 35134991 ~ 35135062 (-)
trnap-agg_6 NA coding downstream 271612 35133664 ~ 35133735 (-)
sri sri,LOC102777834,LOC101483957 coding downstream 294671 35102976 ~ 35110676 (-)
LOC120563201 NA coding downstream 316918 35072958 ~ 35088429 (-)
ndufaf6 ndufaf6,LOC102799695 coding upstream 1805 35409322 ~ 35448298 (-)
LOC120562452 NA coding upstream 146706 35554223 ~ 35565907 (-)
si:dkey-22o22.2 LOC103358277,LOC102314041,LOC101480092,LOC102196329,LOC108240367,LOC102218962 coding upstream 171192 35578709 ~ 35819797 (-)
LOC120562453 NA coding upstream 427585 35835102 ~ 35842232 (-)
LOC120563121 NA coding upstream 525517 35933034 ~ 35938978 (-)
G78591 NA non-coding downstream 12995 35392050 ~ 35392352 (-)
G78583 NA non-coding downstream 53135 35351962 ~ 35352212 (-)
G78582 NA non-coding downstream 55171 35348986 ~ 35350176 (-)
G78566 NA non-coding downstream 140521 35261787 ~ 35264826 (-)
G78567 NA non-coding downstream 143678 35260185 ~ 35261669 (-)
G78614 NA non-coding upstream 6549 35414066 ~ 35414386 (-)
G78631 NA non-coding upstream 90844 35498361 ~ 35516934 (-)
G78620 tp53inp1 non-coding upstream 117556 35525073 ~ 35531790 (-)
G78680 NA non-coding upstream 214181 35621698 ~ 35625221 (-)
G78690 NA non-coding upstream 326149 35733666 ~ 35734165 (-)
plekhf2 plekhf2 other downstream 95950 35268357 ~ 35309397 (-)
G78496 NA other downstream 228108 35173866 ~ 35177239 (-)
G78444 NA other downstream 390825 35012103 ~ 35014522 (-)
bcan NA other downstream 401014 34974824 ~ 35004333 (-)
G78321 NA other downstream 912152 34492346 ~ 34493195 (-)
G78733 LOC104935873 other upstream 617214 36024731 ~ 36026542 (-)
G79034 dek,LOC100692760,LOC101471355,LOC102210945,LOC102312342 other upstream 695480 36102997 ~ 36105675 (-)
creb3l4 NA other upstream 931564 36339081 ~ 36359580 (-)
LOC120563186 LOC103369286,LOC103131393,LOC106962355,LOC106910391 other upstream 1257025 36664542 ~ 36748238 (-)
kiaa0319 LOC103370079 other upstream 1460150 36867667 ~ 36894638 (-)

Expression


Co-expression Network