G78631


Basic Information

Item Value
gene id G78631
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 35498361 ~ 35516934 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105140
acacacacacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacaagtcacacacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacagtcacacacacacacacacacacacagtcacacacacacacacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca
>TU105142
caaacacacagacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacagtcacacacacacacacacacacacagtcacacacacacacacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca
>TU105143
caaacacacagacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacagtcacacacacacacacacacacacagtcacacacacacacacacacagtcacacacacacacacacacagtcacacacacacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca
>TU105144
caaacacacagacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacagtcacacacacacacacacacacacagtcacacacacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcagtcacacacacacacacacagtcacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105140 True 294 lncRNA 0.50 2 35498405 35498738
TU105142 False 216 lncRNA 0.50 3 35498405 35516934
TU105143 False 256 lncRNA 0.50 2 35498405 35516934
TU105144 False 254 lncRNA 0.50 3 35498361 35516934

Neighbor

gene id symbol gene type direction distance location
ndufaf6 ndufaf6,LOC102799695 coding downstream 50063 35409322 ~ 35448298 (-)
trnap-cgg_2 NA coding downstream 362200 35136090 ~ 35136161 (-)
trnap-ugg_1 NA coding downstream 363299 35134991 ~ 35135062 (-)
trnap-agg_6 NA coding downstream 364626 35133664 ~ 35133735 (-)
sri sri,LOC102777834,LOC101483957 coding downstream 387685 35102976 ~ 35110676 (-)
LOC120562452 NA coding upstream 37289 35554223 ~ 35565907 (-)
si:dkey-22o22.2 LOC103358277,LOC102314041,LOC101480092,LOC102196329,LOC108240367,LOC102218962 coding upstream 61775 35578709 ~ 35819797 (-)
LOC120562453 NA coding upstream 318168 35835102 ~ 35842232 (-)
LOC120563121 NA coding upstream 416100 35933034 ~ 35938978 (-)
LOC120563120 NA coding upstream 429449 35946383 ~ 35950158 (-)
G78614 NA non-coding downstream 83975 35414066 ~ 35414386 (-)
G78613 NA non-coding downstream 90844 35405347 ~ 35407517 (-)
G78591 NA non-coding downstream 106009 35392050 ~ 35392352 (-)
G78583 NA non-coding downstream 146149 35351962 ~ 35352212 (-)
G78582 NA non-coding downstream 148185 35348986 ~ 35350176 (-)
G78620 tp53inp1 non-coding upstream 8139 35525073 ~ 35531790 (-)
G78680 NA non-coding upstream 104764 35621698 ~ 35625221 (-)
G78690 NA non-coding upstream 216732 35733666 ~ 35734165 (-)
G78691 LOC103376870 non-coding upstream 224196 35741130 ~ 35741410 (-)
G78698 NA non-coding upstream 304351 35821285 ~ 35821651 (-)
plekhf2 plekhf2 other downstream 188964 35268357 ~ 35309397 (-)
G78496 NA other downstream 321122 35173866 ~ 35177239 (-)
G78444 NA other downstream 483839 35012103 ~ 35014522 (-)
bcan NA other downstream 494028 34974824 ~ 35004333 (-)
G78321 NA other downstream 1005166 34492346 ~ 34493195 (-)
G78733 LOC104935873 other upstream 507797 36024731 ~ 36026542 (-)
G79034 dek,LOC100692760,LOC101471355,LOC102210945,LOC102312342 other upstream 586063 36102997 ~ 36105675 (-)
creb3l4 NA other upstream 822147 36339081 ~ 36359580 (-)
LOC120563186 LOC103369286,LOC103131393,LOC106962355,LOC106910391 other upstream 1147608 36664542 ~ 36748238 (-)
kiaa0319 LOC103370079 other upstream 1350733 36867667 ~ 36894638 (-)

Expression


Co-expression Network