G78645


Basic Information

Item Value
gene id G78645
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 35575172 ~ 35577811 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105163
GGGGGAAAAGCCATTTTTATTAAAAGTCATATACAAAAGGAATACTCCATGTTAGGTTACTATAAAACGTCCATATGTACATCGTATCATACACATCAACAACACTCTGTCGGAGAAAACGCGCGTGAACTCGACACGACATTCACACACTGCTTTTAAAAACACGGGACTTACACAAACGTCCACAGATGTGTCACACGTCAAAACTCACAACATCTGGAGCTGCACATCGGTTTAGAAAAAGACACCTGTGTTATTCCATTTGGATGCATAGCTTCGAGTACAAGTCTTTTTGGGCTCACTTGGTTTTTGTTATTTCGGTACCAGAAGAGAAATGAAAACCACATTCTCATGCAACAATCCCAGGAACCTCGGCGGCAAATGTTCTTTTAATTCCTGTCTGCATCTTGGGGAATAGtgtcgctttgccagaccctcctccaaagcgctgcggaagagggtctggctagtccacaaagcattctgggatgggagaaaaaacatgctctggtttattggcatttccttaaaccaatcccaatcttCATGGGCGATGCTAAGCgtcggacggagccacggtgcctctgcaaaatagcctctggaaggaacttgttttggtggaacatgtgtacgtccaaaggttgttttagtcgtgcaacagaaaactcagattggacagatagtctagctagctgtctggatttaccctgcagagatctgaggagcagttaaccaccggaggttagaacgccaacacaaagaaagcagaagctagcggatatccggcctaaatgagtgaaatctggcggatTTTCCGAtctgcaacggagcaatcctggaagtggaacgtcaaggatatagtcTGCTTGGGGAAAGACTCATGACCTGACGTGCAATCAAAACTACAGCGGCTGAGAtcaatcaattagttgtcaataattaaattaatcgcTATTATGACAATTgatttaagtctttttttttattgaaaaaaaaaaggtaaaaattgtgatttcagcttgttaaatttaaatatgttctagtttcttctctcctctgggacagtaaactgaatatctttgagttgtggacaaaatgaGGGTTGAAAATctgtgctttaacaaaatgttatttacacattgagatttttgatgaataatcatcagaaCTGTCGAATTAATACGTAAAAGTAAGGCTGTGTTCACACTTGGCttcttttttgacaagaaaaagttgactagggcgcatttgtaaaaaaaaaaacaaaaaaaaaagctggcagtgttttggttccaaaaagcagccgagagcgtcttttgttgctataacaacagctacaGTATCCTAGAGCGCTAAGTGGAGAGGTGCTAaggttagataaaacaaagtggtggagcaagctagagaaagaacagtgagagagagagagagagagagagagaaagagaaagagagagaggtgctaatgttagataaaacaaagtggtggagcgagctagagaaagaacagagagagagagagagagagagagagagagagagagagagagagagaggtgctaacgttagataaaacaaagcggtggagcgagctagagaaagaacagagagagagagagagagagagagagagagagaggtgctaacgttagataaaacaaagtggtggagtgagctagagaaagaacagagagagagagagagagagagagagagagagagaaagagagagagagaggtgctaacgttagataaaacaaagcggtggagcgagctagagattGTCATTGGTCGGCTGTCAAAAAAGCGCTTGgcgtagtttttttttttcaacttcaaaaagacGCTCCGAACTGCAGAAACTTCTCTGAAAACACGGTTTACTCCGcaggattataatgtaaaacagacgctGGCAGCTTCAAAAAAAGATGCCAAGTGTGGACACAGCCTTCAAAACACTTAACGATATCAAAAATCTAAGACGATTTCTAGCCTCACACATCGATGTAATATcgacatattgcccagccctaaaacAACTAAACAACTTTCAATTTAAACCATCTGGATTTCTTTGTCGGTTTGAGGATTGAGTTACGCACTTCTACTTTAAACACTCACTTTTATCAAGTTGATAAACTCTCTGATTGTACTCTCTGCCTGCTCAGACTCACTACACGTACATATAAAACTACATTCATCAGGCGGTGTGAAGACaacacgcacacaacacacatacgtTTGTTTCACTAGCTTTGTGGGGACCGTcgttgacataatgcattccctagccccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctcaccctaaccataacctaattctatccctaatcctaaaacaaagtcttaaccttcaaacagccctttaactgggtctgcacagccttgtggggcccaaaatgctggaccccacaaggttGTGCAGACCcaacaagtatactgtattccccggtttttggaccccgcgaatatagtaaaacaagcccacacacacacacacacacacacacaca

Function

GO:

id name namespace
GO:0003677 DNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105163 True 2563 lncRNA 0.42 2 35575172 35577811

Neighbor

gene id symbol gene type direction distance location
ccne2 LOC103358269 coding upstream 28424 35535047 ~ 35546748 (+)
tp53inp1 NA coding upstream 47163 35508333 ~ 35528009 (+)
nagpa NA coding upstream 85695 35448568 ~ 35489477 (+)
LOC120561699 LOC102800167,LOC102194503,LOC101481262,LOC104936483,LOC103358273 coding upstream 212651 35357254 ~ 35362521 (+)
wdr73 csgr05h8orf37 coding upstream 344860 35208147 ~ 35230312 (+)
LOC120562274 NA coding downstream 43949 35621760 ~ 35630081 (+)
LOC120562277 NA coding downstream 271662 35849473 ~ 35856736 (+)
LOC120562454 NA coding downstream 297316 35875127 ~ 35883935 (+)
LOC120562276 NA coding downstream 318539 35896350 ~ 35900892 (+)
LOC120563160 LOC104935873 coding downstream 446815 36024626 ~ 36026571 (+)
G78603 NA non-coding upstream 43448 35528475 ~ 35531724 (+)
G78607 NA non-coding upstream 76434 35498360 ~ 35498738 (+)
G78592 NA non-coding upstream 181573 35393133 ~ 35393599 (+)
G78588 NA non-coding upstream 185289 35389515 ~ 35389883 (+)
G78551 NA non-coding upstream 218687 35356023 ~ 35356485 (+)
G78653 NA non-coding downstream 65095 35642906 ~ 35643353 (+)
G78655 NA non-coding downstream 70719 35648530 ~ 35691645 (+)
G78662 NA non-coding downstream 140141 35717952 ~ 35718951 (+)
G78669 NA non-coding downstream 197461 35775272 ~ 35813607 (+)
G78674 NA non-coding downstream 243479 35821290 ~ 35821641 (+)
G78594 NA other upstream 166490 35405375 ~ 35408682 (+)
LOC120562567 NA other upstream 718640 34839157 ~ 34856532 (+)
G78200 NA other upstream 1030793 34529355 ~ 34544379 (+)
sh3bp5b sh3bp5,LOC102783023 other upstream 1532524 33990542 ~ 34042648 (+)
LOC120562157 NA other upstream 1670887 33894360 ~ 33904285 (+)
LOC120562275 NA other downstream 165484 35743295 ~ 35773988 (+)
LOC120562279 NA other downstream 288031 35865842 ~ 35888172 (+)
G78759 NA other downstream 533040 36110851 ~ 36190839 (+)
G78772 NA other downstream 680349 36258160 ~ 36350995 (+)
LOC120563181 LOC107378893,LOC103370072 other downstream 814441 36392252 ~ 36465230 (+)

Expression


Co-expression Network