G78662


Basic Information

Item Value
gene id G78662
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 35717952 ~ 35718951 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105188
ggaaagctcattgtgggactggctctagtggctgtaattctgcaccaaggctgaattttgggaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaagtctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggactatataaaagagacttcagatacagtattaggggaccactaaggtctatatgaaagagacttcagatacagtattaggggaccactaaggtctatatgaaagagacttcagatacagtattaggggaccactaaagtctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggactatataaaagagacttcagatacagtattaggggaccactaaggtctatatgaaagagacttcagatacagtattaggggaccactaaggtctatatgaaagagacttcagatacagtattaggggaccactaaggtctatatgaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggactatataaaagagacttcagatacagtattaggggaccactaaggactatataaaagcatccaaagagcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105188 True 1000 lncRNA 0.38 1 35717952 35718951

Neighbor

gene id symbol gene type direction distance location
LOC120562274 NA coding upstream 87871 35621760 ~ 35630081 (+)
ccne2 LOC103358269 coding upstream 171204 35535047 ~ 35546748 (+)
tp53inp1 NA coding upstream 189943 35508333 ~ 35528009 (+)
nagpa NA coding upstream 228475 35448568 ~ 35489477 (+)
LOC120561699 LOC102800167,LOC102194503,LOC101481262,LOC104936483,LOC103358273 coding upstream 355431 35357254 ~ 35362521 (+)
LOC120562277 NA coding downstream 130522 35849473 ~ 35856736 (+)
LOC120562454 NA coding downstream 156176 35875127 ~ 35883935 (+)
LOC120562276 NA coding downstream 177399 35896350 ~ 35900892 (+)
LOC120563160 LOC104935873 coding downstream 305675 36024626 ~ 36026571 (+)
dek LOC102312342,LOC102210945 coding downstream 373248 36092199 ~ 36110132 (+)
G78655 NA non-coding upstream 26307 35648530 ~ 35691645 (+)
G78653 NA non-coding upstream 74599 35642906 ~ 35643353 (+)
G78645 NA non-coding upstream 140141 35575172 ~ 35577811 (+)
G78603 NA non-coding upstream 186228 35528475 ~ 35531724 (+)
G78607 NA non-coding upstream 219214 35498360 ~ 35498738 (+)
G78669 NA non-coding downstream 56321 35775272 ~ 35813607 (+)
G78674 NA non-coding downstream 102339 35821290 ~ 35821641 (+)
G78705 NA non-coding downstream 189075 35908026 ~ 35908235 (+)
G78706 NA non-coding downstream 189869 35908820 ~ 35909069 (+)
G78707 NA non-coding downstream 209489 35928440 ~ 35928896 (+)
G78594 NA other upstream 309270 35405375 ~ 35408682 (+)
LOC120562567 NA other upstream 861420 34839157 ~ 34856532 (+)
G78200 NA other upstream 1173573 34529355 ~ 34544379 (+)
sh3bp5b sh3bp5,LOC102783023 other upstream 1675304 33990542 ~ 34042648 (+)
LOC120562157 NA other upstream 1813667 33894360 ~ 33904285 (+)
LOC120562275 NA other downstream 24344 35743295 ~ 35773988 (+)
LOC120562279 NA other downstream 146891 35865842 ~ 35888172 (+)
G78759 NA other downstream 391900 36110851 ~ 36190839 (+)
G78772 NA other downstream 539209 36258160 ~ 36350995 (+)
LOC120563181 LOC107378893,LOC103370072 other downstream 673301 36392252 ~ 36465230 (+)

Expression


Co-expression Network