G78669


Basic Information

Item Value
gene id G78669
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 35775272 ~ 35813607 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105208
acacacacacacacacacagacacacatacacacacacacacagacagacacacacacacacacacagacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacagacagacacacacatacac
>TU105209
acacacacacacacacacagacacacatacacacacacacacagacagacacacacacacacacacagacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacagagacacacagacagagacacacacacacacacacacagacacacacacacacacacacacacacacagacacacacacacacacacacacacac
>TU105210
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcacacacacacacacacacagacagacagacagacacacacacacacacacacacacacacagacacacacacacacacagacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacagagacacacagacagagacacacacacacacacacacagacacacacacacacacacacacacacacagacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105208 False 176 lncRNA 0.49 2 35783426 35783663
TU105209 False 252 lncRNA 0.50 3 35783426 35813607
TU105210 True 347 lncRNA 0.50 3 35775272 35813607

Neighbor

gene id symbol gene type direction distance location
LOC120562274 NA coding upstream 145191 35621760 ~ 35630081 (+)
ccne2 LOC103358269 coding upstream 228524 35535047 ~ 35546748 (+)
tp53inp1 NA coding upstream 247263 35508333 ~ 35528009 (+)
nagpa NA coding upstream 285795 35448568 ~ 35489477 (+)
LOC120561699 LOC102800167,LOC102194503,LOC101481262,LOC104936483,LOC103358273 coding upstream 412751 35357254 ~ 35362521 (+)
LOC120562277 NA coding downstream 35866 35849473 ~ 35856736 (+)
LOC120562454 NA coding downstream 61520 35875127 ~ 35883935 (+)
LOC120562276 NA coding downstream 82743 35896350 ~ 35900892 (+)
LOC120563160 LOC104935873 coding downstream 211019 36024626 ~ 36026571 (+)
dek LOC102312342,LOC102210945 coding downstream 278592 36092199 ~ 36110132 (+)
G78662 NA non-coding upstream 56321 35717952 ~ 35718951 (+)
G78655 NA non-coding upstream 83627 35648530 ~ 35691645 (+)
G78653 NA non-coding upstream 131919 35642906 ~ 35643353 (+)
G78645 NA non-coding upstream 197461 35575172 ~ 35577811 (+)
G78603 NA non-coding upstream 243548 35528475 ~ 35531724 (+)
G78674 NA non-coding downstream 7683 35821290 ~ 35821641 (+)
G78705 NA non-coding downstream 94419 35908026 ~ 35908235 (+)
G78706 NA non-coding downstream 95213 35908820 ~ 35909069 (+)
G78707 NA non-coding downstream 114833 35928440 ~ 35928896 (+)
G78716 NA non-coding downstream 149166 35962773 ~ 35963505 (+)
LOC120562275 NA other upstream 1284 35743295 ~ 35773988 (+)
G78594 NA other upstream 366590 35405375 ~ 35408682 (+)
LOC120562567 NA other upstream 918740 34839157 ~ 34856532 (+)
G78200 NA other upstream 1230893 34529355 ~ 34544379 (+)
sh3bp5b sh3bp5,LOC102783023 other upstream 1732624 33990542 ~ 34042648 (+)
LOC120562279 NA other downstream 52235 35865842 ~ 35888172 (+)
G78759 NA other downstream 297244 36110851 ~ 36190839 (+)
G78772 NA other downstream 444553 36258160 ~ 36350995 (+)
LOC120563181 LOC107378893,LOC103370072 other downstream 578645 36392252 ~ 36465230 (+)
LOC120562456 dennd4b other downstream 767358 36580965 ~ 36670029 (+)

Expression


Co-expression Network