G78743


Basic Information

Item Value
gene id G78743
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36061790 ~ 36062537 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105314
gtcctattaaagttaaaaaatataattacatgtcatttttaaatgaatattcggttttctttcagaccatttatatttatggatatttttttcaaataaaattaaaagattctaaatgaaaacatggcattttatccaaatcaaaagctcgccttggatgtagcatacaatactgactcaagtgattcaagtgactcgcataacccggatcagtttagtgagtgactcagaataacctgaatcctaaaaaggaattgagtttgccaggcctactTGTGGCACTCTTACACTTCATGaacttacttcctgctttgctcctttATAACAGGAGGCCACTAGAGTGTGTTGCcactataaatgtaaatataattcGTAATTTGCTGCTTGAACCAACgagttatgtgttttttttcggGTGAGGACAGTCATAATGTAGTAACCGTAATATGTAATTTGGTGCAAGCATTCTGAGTTGTTTCCTACAATTCACAGCATGTCATGTGTTATTAGACAGGTTGTTGCCACAACAACGCTTGCTTTGGCGGAGAAAAAATATTTCTGTGTTGCTGTTGTGTTTCATCACATTATCTCTGTGCACCACCCTTCTTCTCAGAGAGTACACATGCATTAGTAAGTGTTGTGTAGAGGTCAGCATCAAACCCTACAGGCTGTTCTTTGGTCTTGGCACCTTGTTTAGTTCTGTTATCGCTTTGTGACTCAGTCATGCAATAAATGACATTCTCCTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105314 True 748 lncRNA 0.37 1 36061790 36062537

Neighbor

gene id symbol gene type direction distance location
LOC120561730 NA coding downstream 64019 35994652 ~ 35997771 (-)
LOC120563120 NA coding downstream 111632 35946383 ~ 35950158 (-)
LOC120563121 NA coding downstream 122812 35933034 ~ 35938978 (-)
LOC120562453 NA coding downstream 219558 35835102 ~ 35842232 (-)
si:dkey-22o22.2 LOC103358277,LOC102314041,LOC101480092,LOC102196329,LOC108240367,LOC102218962 coding downstream 241993 35578709 ~ 35819797 (-)
kcnv1 kcnv1 coding upstream 1025 36063562 ~ 36071103 (-)
LOC120563092 NA coding upstream 13083 36075620 ~ 36090492 (-)
LOC120563179 npr1,olgc2 coding upstream 129793 36192330 ~ 36317708 (-)
LOC120562455 NA coding upstream 489907 36552444 ~ 36559464 (-)
LOC120563048 NA coding upstream 778964 36841501 ~ 36852068 (-)
G78729 NA non-coding downstream 77751 35982408 ~ 35984039 (-)
G78698 NA non-coding downstream 240139 35821285 ~ 35821651 (-)
G78691 LOC103376870 non-coding downstream 320380 35741130 ~ 35741410 (-)
G78690 NA non-coding downstream 327625 35733666 ~ 35734165 (-)
G78680 NA non-coding downstream 436569 35621698 ~ 35625221 (-)
G79030 NA non-coding upstream 29665 36092202 ~ 36093639 (-)
G79033 NA non-coding upstream 46925 36109462 ~ 36141399 (-)
G79039 NA non-coding upstream 50358 36112895 ~ 36171303 (-)
G79041 NA non-coding upstream 56500 36119037 ~ 36119489 (-)
G79043 NA non-coding upstream 59926 36122463 ~ 36186239 (-)
G78733 LOC104935873 other downstream 35248 36024731 ~ 36026542 (-)
plekhf2 plekhf2 other downstream 752393 35268357 ~ 35309397 (-)
G78496 NA other downstream 884551 35173866 ~ 35177239 (-)
G78444 NA other downstream 1047268 35012103 ~ 35014522 (-)
bcan NA other downstream 1057457 34974824 ~ 35004333 (-)
G79034 dek,LOC100692760,LOC101471355,LOC102210945,LOC102312342 other upstream 40460 36102997 ~ 36105675 (-)
creb3l4 NA other upstream 276544 36339081 ~ 36359580 (-)
LOC120563186 LOC103369286,LOC103131393,LOC106962355,LOC106910391 other upstream 602005 36664542 ~ 36748238 (-)
kiaa0319 LOC103370079 other upstream 805130 36867667 ~ 36894638 (-)
LOC120562574 NA other upstream 1026287 37088824 ~ 37235129 (-)

Expression


Co-expression Network