G78770


Basic Information

Item Value
gene id G78770
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36335117 ~ 36339554 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105357
TGTTCCCttttaataaagtaatgatgAAACTTAAAGCATGTGGGCGGATGAATGACAAACATACCAAAGCTGTTGGACAGAGAGGCGGCACTCTGCTGCAAAATTcataaatataataatgttaTGAACGCTTTTAACTGATCTTATCTTGGGTCCAGTAGAGGCTGAAGCAGCCCTGTAACTCCAAGGGGAACttcataaataaaatcaaaccCAAAAACAACAATCAATTCATTAATTCAGAAGGACTTTTGACTTTTGTTAGAAATAGAAAAACCTTCAGAAATAGACTCGACAAATCCGTCcatcagaagaaaaaaaaaaattaatccaacattatttacaaaataaagtaaCTGAACTGGATATGGGTTGCAACacggtctcacagcagttcgtgaaatggtcacgtcatttttaatctattgattcgtgtacatgGACACGATTATCTCGGTATTTTTCCTGGTGGTCAGCACGTAATGGGGTCatctatacggaggttgggtttaggaaaaagaagaacgtggaaaggaaacgtcacacgccgggagacgacccccaaccaacctccctacgcggattttcggcatttcattactacttgctaccgtagtcgtgctgtgatcacgaaagatgcttcccattgaaatacattaaagtgctcatattacacccattttcagcttcataattttattttgaggttgtaccagaataggtttacatggtttaattttcattagttttgttgcactgcacattgctgcagctcctcttttcaccctgtgtgttgagctctcttttttagctacagagtgaggcatctcaacttctgtaacattttttttgggagtcgcacatgctcagtagctaggtaaggactacatgagctagctagctgtttctcagtagctaggtaaggagtacatcagctagctagctgtttctcagtagctaggtaaggactacatcagctagctgtttctccaacttcggcctgtacgaggcaggattagccgggagacttcttctaaacgagggcgcacttcacacttagcgtggaatacctgcagaacagggacatggaagtagttctatacgatttattttgtagattagagTGAACtagtgtgttgtagcagtgttttgccattgagaacgagctagcatgctaacggttagcccccttgCCACCTCGTCTTGGCTAGTGaagtagaaagccgtgcagattttgaccagctcacccggagactgaaggcaggacacattcagaaaccagatctcactcagaacaccaaggatggatttatttcaaagtttgtatgcgtgtggaagcaccagagacgcAAAATatcaccccaaatcccagaaaaagtgatttctttttcataatatgggctcTTTAAACaacgtgctggccaccacgaaataAACAAGCTAATAGATTaaataatgtgaccatttcacgaactgccgtgagactgggttgagaTATTAATGTGAAGCAGGAAAAACACGCCTCCTCTGGATGAAATAAAAGATAAGTTAACAAAAAATACACTCCTTAGCTTCAGATTTACCCTTAAATTTACAGTTATTAATATATCCGATATTCTGTAAAAGTTTGGGAAACTTCGATAAACGTTTCCATCCGTATTTCCCGAATCGGAGTGCAAAGTTTATGAGAATAAAAGCCAGGCTGAACAGTAACCAGAAATGTTCTTTTTGAGTTCAGAGCTGGTCACTGCTGATCGTTTTTATActttaaggcgctgacacaccgagccgataatcggccgtcgtcCGTTGGAGGAGcagtcggccttcatttgggccaaTTTGACGCGTTGAATCcgaatcggaaggcgggcagtcgggctccatgacccatctgattggtagagagctaacccggaaatgacaagtgggatgaggtgactagagtctctcaaaatctgacgaaaatcttttaaactgacctttgttgatctgaaatgaagacagattcagcaactgcacggcctatttctcgcttaaaatgttttcagaaacacgtctcggtgaactattttagtacaataccAGATCGTATACCGAGAAGCCAgaccccacgtgacgcgttcgtccaatcagctgccggttttgtGCGTCTCGcacacgcgcagaacgtacgctcaaatcggtgtctcttcggtgtgtttcGAGGCACCTCGGGGAGGCTGTCAGTCCGACgaaggtcggccgtcgggttggtgtgtcaggggcttaaGTTTTGAACAAATTAACCAAAACAAGTGAGCGTTAGAGATGCTGGCAGGCAGCTTGTGTTCCCTTttgggcagagccaggctaacagTTTCCAtcggtttccagtctttgtgctaagctaagctaactggctgctggctgtataGCGTCACACCgaccgtacagacatgagagagtAGAAGCAAATTTCCTCGTCCAACTCTGAACAAGAAAACGCATATATTATATTAGCATATTTccctcaaaatgtcaaactatttcttcaAGCTCGGACTTTAAACAAAAGACTAAGTTAAGGTTTGAGTCAACATGTGTGCGTTTTGGAAATTGAAATTATTgaaaatgtttgtgttgtttgctgGCTGTGACTTTGgcgacatttacattttatgttttggtttttaagcgttCGGTTTTGAGCCAAAAGAGAACTCCGTGGACATAAGGAGACAGCGTGGAGACTccgccccctgctggtagttacCATGGTACCGTTAGTAGCTTTAAGTCCCAGAGAACGAGACGCTGTGACCGATAAGGAGAAACGTTTCGGTGTCAGAGTCGGTGTtaccaaatgtctccgtttgtggCCGTTGAGACGTTGGAACAACCCCGCAGATTACCAACCAGAACGGGTCAGAAGAGTTTCCAAATGTCTGGTTTAGGAACTCGGAAACACCAGAGatgggggaatgagagggggtaaTGCCAGAGCAGcaggaatgagagggggtaaTGCCAGAGCAGCAGGAATGAGATAGGGGTAATGCCAGAGCAGCAGGAATGAGATAGGGGGTAATGCCAGAGCAGcaggaatgagagggggtaatgccagagcagggggaatgagagggggtaaTGCCAgcgcagggggaatgagagggggaaacgccagagcagggggaatgagagggggacacgccagagcagggggaatgagagggggacacgCCAgcgcagggggaatgagagggggaaacgtagcgttttttaaaccaaaacgtagcaatgtaaatgtagcctttgAGCGAGACGTTGAACATGAAGTCCAGTCATAGTGGTTGAAAGCGTCTACATCTCGTCGGCATGTGCAGGTTTGGCGGGATTTCGGCTTCCTTTCCCCGCCGCCGCTCTCAGACCGAGCGCCAGcggctccgtctccgtctccccGGCGACGAGAGCCGAGCCGTTCCCCGATTGGCTCCCCTCCTGAGCCGTCCCATCGAAGCCTGCGGTGCCATCCGGAGGTTCCGATTGGCCGAGTTCAGCGGGCGGCACAGCCGGAGCATCGGCGTTGTCCGCTGTCggctgggaggaggaggaggaggaggaggaggaggaggaggggtcaGTCAGGATGTTTCTGGAAATAACTGGAAAGATTGAAGCATATATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105357 True 3669 lncRNA 0.46 2 36335117 36339554

Neighbor

gene id symbol gene type direction distance location
LOC120563177 NA coding upstream 144702 36178207 ~ 36190415 (+)
LOC120563175 NA coding upstream 205875 36111050 ~ 36129242 (+)
dek LOC102312342,LOC102210945 coding upstream 224985 36092199 ~ 36110132 (+)
LOC120563160 LOC104935873 coding upstream 308546 36024626 ~ 36026571 (+)
LOC120562276 NA coding upstream 434225 35896350 ~ 35900892 (+)
nat16l NA coding downstream 21146 36360700 ~ 36367025 (+)
LOC120563182 NA coding downstream 29140 36368694 ~ 36383096 (+)
LOC120563185 NA coding downstream 188927 36528481 ~ 36541530 (+)
atp2c1 LOC103369286 coding downstream 420956 36760510 ~ 36792668 (+)
LOC120563178 NA coding downstream 470006 36809560 ~ 36829422 (+)
G78776 NA non-coding upstream 45963 36288792 ~ 36289154 (+)
LOC120563188 NA non-coding upstream 162953 36161780 ~ 36172164 (+)
G78756 NA non-coding upstream 247021 36087873 ~ 36088096 (+)
G78736 NA non-coding upstream 300465 36034348 ~ 36034652 (+)
G78716 NA non-coding upstream 371612 35962773 ~ 35963505 (+)
G78798 NA non-coding downstream 58495 36398049 ~ 36415884 (+)
G78813 NA non-coding downstream 107093 36446647 ~ 36507814 (+)
G78822 NA non-coding downstream 161094 36500648 ~ 36706609 (+)
G78836 NA non-coding downstream 195239 36534793 ~ 36642606 (+)
G78837 NA non-coding downstream 239278 36578832 ~ 36643491 (+)
G78759 NA other upstream 144278 36110851 ~ 36190839 (+)
LOC120562279 NA other upstream 446945 35865842 ~ 35888172 (+)
LOC120562275 NA other upstream 561129 35743295 ~ 35773988 (+)
G78594 NA other upstream 926435 35405375 ~ 35408682 (+)
LOC120562567 NA other upstream 1478585 34839157 ~ 34856532 (+)
LOC120563181 LOC107378893,LOC103370072 other downstream 52698 36392252 ~ 36465230 (+)
LOC120562456 dennd4b other downstream 241411 36580965 ~ 36670029 (+)
LOC120562457 NA other downstream 346382 36685936 ~ 36703993 (+)
G78888 NA other downstream 499668 36839222 ~ 36939954 (+)
G78989 NA other downstream 1091617 37431171 ~ 37432679 (+)

Expression


Co-expression Network